RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 BTNL9Q6UXG8 535 aa20.27■□□□□ 0.84
CDK4-208ENST00000551706 RIOX2Q8IUF8 465 aa20.27■□□□□ 0.84
CDK4-208ENST00000551706 CHMP4CQ96CF2 233 aa20.27■□□□□ 0.84
CDK4-208ENST00000551706 TMEM87BQ96K49 555 aa20.27■□□□□ 0.84
CDK4-208ENST00000551706 NEK1Q96PY6 1258 aa20.27■□□□□ 0.84
CDK4-208ENST00000551706 NUDT12Q9BQG2 462 aa20.27■□□□□ 0.84
CDK4-208ENST00000551706 TEX13BQ9BXU2 312 aa20.27■□□□□ 0.84
CDK4-208ENST00000551706 GJD2Q9UKL4 321 aa20.27■□□□□ 0.84
CDK4-208ENST00000551706 ZNF214Q9UL59 606 aaPredicted RBP20.27■□□□□ 0.84
CDK4-208ENST00000551706 VCANP13611 3396 aa20.26■□□□□ 0.83
CDK4-208ENST00000551706 STRNO43815 780 aa20.26■□□□□ 0.83
CDK4-208ENST00000551706 ERCC3P19447 782 aa20.26■□□□□ 0.83
CDK4-208ENST00000551706 HSPA4P34932 840 aa20.26■□□□□ 0.83
CDK4-208ENST00000551706 ASPRV1Q53RT3 343 aa20.26■□□□□ 0.83
CDK4-208ENST00000551706 RASGRP2Q7LDG7 609 aa20.26■□□□□ 0.83
CDK4-208ENST00000551706 CHST3Q7LGC8 479 aa20.26■□□□□ 0.83
CDK4-208ENST00000551706 NCAPG2Q86XI2 1143 aa20.26■□□□□ 0.83
CDK4-208ENST00000551706 ANKLE1Q8NAG6 615 aa20.26■□□□□ 0.83
CDK4-208ENST00000551706 KCNB2Q92953 911 aa20.26■□□□□ 0.83
CDK4-208ENST00000551706 SLC15A5A6NIM6 579 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 PRC1O43663 620 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 HMGB1P09429 215 aaKnown RBP20.25■□□□□ 0.83
CDK4-208ENST00000551706 SYN1P17600 705 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 PTPREP23469 700 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 MAGEA10P43363 369 aaPredicted RBP20.25■□□□□ 0.83
CDK4-208ENST00000551706 ANTXR2P58335 489 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 RASEFQ8IZ41 740 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 TMTC2Q8N394 836 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 IGDCC4Q8TDY8 1250 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 GPCPD1Q9NPB8 672 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 PRR12Q9ULL5 1215 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 PARP14Q460N5 1801 aa20.25■□□□□ 0.83
CDK4-208ENST00000551706 FRMPD2Q68DX3 1309 aaPredicted RBP20.25■□□□□ 0.83
CDK4-208ENST00000551706 PARP1P09874 1014 aaKnown RBP20.24■□□□□ 0.83
CDK4-208ENST00000551706 XRCC5P13010 732 aaKnown RBP20.24■□□□□ 0.83
CDK4-208ENST00000551706 MORN1Q5T089 497 aa20.24■□□□□ 0.83
CDK4-208ENST00000551706 SYDE2Q5VT97 1194 aa20.24■□□□□ 0.83
CDK4-208ENST00000551706 SNRNP48Q6IEG0 339 aaKnown RBP20.24■□□□□ 0.83
CDK4-208ENST00000551706 ABRAQ8N0Z2 381 aa20.24■□□□□ 0.83
CDK4-208ENST00000551706 UBE2OQ9C0C9 1292 aaKnown RBP20.24■□□□□ 0.83
CDK4-208ENST00000551706 WDR19Q8NEZ3 1342 aa20.24■□□□□ 0.83
CDK4-208ENST00000551706 RGS2P41220 211 aa20.23■□□□□ 0.83
CDK4-208ENST00000551706 GRB14Q14449 540 aa20.23■□□□□ 0.83
CDK4-208ENST00000551706 TTBK2Q6IQ55 1244 aa20.23■□□□□ 0.83
CDK4-208ENST00000551706 CATIPQ7Z7H3 387 aa20.23■□□□□ 0.83
CDK4-208ENST00000551706 TRMT44Q8IYL2 757 aaKnown RBP20.23■□□□□ 0.83
CDK4-208ENST00000551706 CPXCR1Q8N123 301 aa20.23■□□□□ 0.83
CDK4-208ENST00000551706 USP6NLQ92738 828 aa20.23■□□□□ 0.83
CDK4-208ENST00000551706 USP26Q9BXU7 913 aa20.23■□□□□ 0.83
CDK4-208ENST00000551706 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.23■□□□□ 0.83
CDK4-208ENST00000551706 PNMA2Q9UL42 364 aa20.23■□□□□ 0.83
CDK4-208ENST00000551706 RPTORQ8N122 1335 aa20.23■□□□□ 0.83
CDK4-208ENST00000551706 FCER1AP12319 257 aa20.22■□□□□ 0.83
CDK4-208ENST00000551706 SLC16A2P36021 539 aa20.22■□□□□ 0.83
CDK4-208ENST00000551706 LIFRP42702 1097 aa20.22■□□□□ 0.83
CDK4-208ENST00000551706 MAP2K5Q13163 448 aa20.22■□□□□ 0.83
CDK4-208ENST00000551706 DHX32Q7L7V1 743 aaKnown RBP20.22■□□□□ 0.83
CDK4-208ENST00000551706 RANBP17Q9H2T7 1088 aaKnown RBP20.22■□□□□ 0.83
CDK4-208ENST00000551706 LY9Q9HBG7 655 aa20.22■□□□□ 0.83
CDK4-208ENST00000551706 RAVER2Q9HCJ3 691 aaKnown RBP20.22■□□□□ 0.83
CDK4-208ENST00000551706 SPTBN5Q9NRC6 3674 aaKnown RBP20.22■□□□□ 0.83
CDK4-208ENST00000551706 SH2B2O14492 632 aaPredicted RBP20.21■□□□□ 0.83
CDK4-208ENST00000551706 CYP2B6P20813 491 aa20.21■□□□□ 0.83
CDK4-208ENST00000551706 APBA2Q99767 749 aa20.21■□□□□ 0.83
CDK4-208ENST00000551706 SLC5A4Q9NY91 659 aa20.21■□□□□ 0.83
CDK4-208ENST00000551706 FBXO40Q9UH90 709 aa20.21■□□□□ 0.83
CDK4-208ENST00000551706 SNX14Q9Y5W7 946 aa20.21■□□□□ 0.83
CDK4-208ENST00000551706 CCDC69A6NI79 296 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 HOXC6P09630 235 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 GOLGA8HP0CJ92 632 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 PSMA5P28066 241 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 TROAPQ12815 778 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 KCTD2Q14681 263 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 TKFCQ3LXA3 575 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 ADCK5Q3MIX3 580 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 NFXL1Q6ZNB6 911 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 CHST13Q8NET6 341 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 MMP19Q99542 508 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 MAP3K14Q99558 947 aa20.2■□□□□ 0.82
CDK4-208ENST00000551706 DDAH1O94760 285 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 ICAM1P05362 532 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 ADORA2AP29274 412 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 EXOSC10Q01780 885 aaKnown RBP20.19■□□□□ 0.82
CDK4-208ENST00000551706 GRM4Q14833 912 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 CCDC174Q6PII3 467 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.19■□□□□ 0.82
CDK4-208ENST00000551706 DPP9Q86TI2 863 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 ZNF654Q8IZM8 581 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 JAKMIP1Q96N16 626 aaKnown RBP20.19■□□□□ 0.82
CDK4-208ENST00000551706 C11orf49Q9H6J7 331 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 SENP2Q9HC62 589 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 PRDM6Q9NQX0 595 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 RIPK3Q9Y572 518 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 ZNF536O15090 1300 aa20.19■□□□□ 0.82
CDK4-208ENST00000551706 PALM3A6NDB9 673 aaPredicted RBP20.18■□□□□ 0.82
CDK4-208ENST00000551706 HMGCRP04035 888 aa20.18■□□□□ 0.82
CDK4-208ENST00000551706 CALM1P0DP23 149 aa20.18■□□□□ 0.82
CDK4-208ENST00000551706 CALM2P0DP24 149 aa20.18■□□□□ 0.82
CDK4-208ENST00000551706 CALM3P0DP25 149 aa20.18■□□□□ 0.82
CDK4-208ENST00000551706 KIF5BP33176 963 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms