RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 CDCA5Q96FF9 252 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 WRNIP1Q96S55 665 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 SPZ1Q9BXG8 430 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 ARHGEF10LQ9HCE6 1279 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 SYNPO2Q9UMS6 1093 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 TMX2Q9Y320 296 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 KIF3AQ9Y496 699 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 RLFQ13129 1914 aa9.38□□□□□ -0.91
DEPDC4-207ENST00000549249 F5H6K3 240 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 FMR1Q06787 632 aaKnown RBP eCLIP9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 KLRC3Q07444 240 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 PRKG1Q13976 671 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 CCDC96Q2M329 555 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 SUPT20HL1Q3ZLR7 823 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 KCTD1Q719H9 257 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 LDHDQ86WU2 507 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 SCYL3Q8IZE3 742 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 TNS4Q8IZW8 715 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 FBXO18Q8NFZ0 1043 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 DCAF4Q8WV16 495 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 PIBF1Q8WXW3 757 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 ZKSCAN4Q969J2 545 aaPredicted RBP9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 GMCL1Q96IK5 515 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 C8orf76Q96K31 380 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 NUP88Q99567 741 aaPredicted RBP9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 UBA5Q9GZZ9 404 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 RIOX1Q9H6W3 641 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 GPCPD1Q9NPB8 672 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 GINM1Q9NU53 330 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 V9GY48 417 aaPredicted RBP9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 LOC285556D6RIA3 1793 aa9.37□□□□□ -0.91
DEPDC4-207ENST00000549249 KIF28PB7ZC32 967 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 BAG4O95429 457 aaKnown RBP9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 PTPRAP18433 802 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 SMARCA1P28370 1054 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 SLC1A4P43007 532 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 DGKZQ13574 1117 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 ZYXQ15942 572 aaKnown RBP9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 PFKFB3Q16875 520 aaPredicted RBP9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 GPATCH4Q5T3I0 446 aaKnown RBP9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 MAP1SQ66K74 1059 aaPredicted RBP9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 KRT40Q6A162 431 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 MOB2Q70IA6 237 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 FERMT3Q86UX7 667 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 RGS22Q8NE09 1264 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 WASF1Q92558 559 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 LZTS2Q9BRK4 669 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 VCPKMTQ9H867 229 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 VPS54Q9P1Q0 977 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 SNCAIPQ9Y6H5 919 aa9.36□□□□□ -0.91
DEPDC4-207ENST00000549249 COL11A1P12107 1806 aaPredicted RBP9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 H3BQV1 296 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 TRAF5O00463 557 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 ADAMTS3O15072 1205 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 MAP3K7O43318 606 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 RAD21O60216 631 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 HSPA1AP0DMV8 641 aaKnown RBP9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 HSPA1BP0DMV9 641 aaKnown RBP9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 SCG2P13521 617 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 PDIA4P13667 645 aaKnown RBP9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 SLC16A2P36021 539 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 AKAP17AQ02040 695 aaKnown RBP9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 KIF23Q02241 960 aaPredicted RBP9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 VGLL4Q14135 290 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 NFKBIBQ15653 356 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 NPY5RQ15761 445 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 MAP3K11Q16584 847 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 COL13A1Q5TAT6 717 aaPredicted RBP9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 WWC2Q6AWC2 1192 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 FAM173BQ6P4H8 233 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 ADGRF4Q8IZF3 695 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 SPICE1Q8N0Z3 855 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 GPKOWQ92917 476 aaPredicted RBP eCLIP9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 MTMR8Q96EF0 704 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 PIGSQ96S52 555 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 JMJD4Q9H9V9 463 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 KCNJ14Q9UNX9 436 aa9.35□□□□□ -0.91
DEPDC4-207ENST00000549249 GOLGA8CPA6NN73 597 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 PPP1R3GB7ZBB8 358 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 USP17L10C9JJH3 530 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 BHMG1C9JSJ3 638 aaPredicted RBP9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 STXBP3O00186 592 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 PPP1R11O60927 126 aaPredicted RBP9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 MMP1P03956 469 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 BMP3P12645 472 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 COL9A1P20849 921 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 MCM4P33991 863 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 FAM83BQ5T0W9 1011 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 C6orf132Q5T0Z8 1188 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 BTNL9Q6UXG8 535 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 WDR18Q9BV38 432 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 PHF20Q9BVI0 1012 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 KIAA1683Q9H0B3 1180 aa9.34□□□□□ -0.91
DEPDC4-207ENST00000549249 VAT1LQ9HCJ6 419 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms