RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 JAKMIP1Q96N16 626 aaKnown RBP22.33■■□□□ 1.17
DDX55-211ENST00000544429 LRRC2Q9BYS8 371 aa22.33■■□□□ 1.17
DDX55-211ENST00000544429 AGXT2Q9BYV1 514 aa22.33■■□□□ 1.17
DDX55-211ENST00000544429 CPVLQ9H3G5 476 aa22.33■■□□□ 1.17
DDX55-211ENST00000544429 IVNS1ABPQ9Y6Y0 642 aa22.33■■□□□ 1.17
DDX55-211ENST00000544429 EIF5BO60841 1220 aaKnown RBP22.32■■□□□ 1.16
DDX55-211ENST00000544429 ADORA2AP29274 412 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 RGS2P41220 211 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 SNAP25P60880 206 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 WDR78Q5VTH9 848 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 CHST13Q8NET6 341 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 SH3TC2Q8TF17 1288 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 MTMR8Q96EF0 704 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 TCEANC2Q96MN5 208 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 APBA2Q99767 749 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 TM6SF1Q9BZW5 370 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 UBA5Q9GZZ9 404 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 ZSWIM6Q9HCJ5 1215 aa22.32■■□□□ 1.16
DDX55-211ENST00000544429 BAZ2BQ9UIF8 2168 aaKnown RBP22.32■■□□□ 1.16
DDX55-211ENST00000544429 DNAJC25-GNG10A0A024R161 153 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 KLRF2D3W0D1 207 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 FCER1AP12319 257 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 CPA1P15085 419 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 ELNP15502 786 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 CYP2B6P20813 491 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 TKFCQ3LXA3 575 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 NBPF11Q86T75 865 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 ADGRF4Q8IZF3 695 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 TRIB2Q92519 343 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 JMJD4Q9H9V9 463 aa22.31■■□□□ 1.16
DDX55-211ENST00000544429 LCTP09848 1927 aa22.3■■□□□ 1.16
DDX55-211ENST00000544429 COBLO75128 1261 aa22.3■■□□□ 1.16
DDX55-211ENST00000544429 RPS6KB1P23443 525 aa22.3■■□□□ 1.16
DDX55-211ENST00000544429 PSMA5P28066 241 aa22.3■■□□□ 1.16
DDX55-211ENST00000544429 ANAPC15P60006 121 aa22.3■■□□□ 1.16
DDX55-211ENST00000544429 BLOC1S2Q6QNY1 142 aa22.3■■□□□ 1.16
DDX55-211ENST00000544429 NPLOC4Q8TAT6 608 aa22.3■■□□□ 1.16
DDX55-211ENST00000544429 RIOX1Q9H6W3 641 aa22.3■■□□□ 1.16
DDX55-211ENST00000544429 FBXO40Q9UH90 709 aa22.3■■□□□ 1.16
DDX55-211ENST00000544429 CTDP1Q9Y5B0 961 aaPredicted RBP22.3■■□□□ 1.16
DDX55-211ENST00000544429 KIAA0100Q14667 2235 aaKnown RBP22.3■■□□□ 1.16
DDX55-211ENST00000544429 CYTH3O43739 400 aa22.29■■□□□ 1.16
DDX55-211ENST00000544429 MAP3K21Q5TCX8 1036 aa22.29■■□□□ 1.16
DDX55-211ENST00000544429 CCDC174Q6PII3 467 aa22.29■■□□□ 1.16
DDX55-211ENST00000544429 APOA5Q6Q788 366 aa22.29■■□□□ 1.16
DDX55-211ENST00000544429 TRMT44Q8IYL2 757 aaKnown RBP22.29■■□□□ 1.16
DDX55-211ENST00000544429 MMP19Q99542 508 aa22.29■■□□□ 1.16
DDX55-211ENST00000544429 MYL10Q9BUA6 226 aa22.29■■□□□ 1.16
DDX55-211ENST00000544429 CWC22Q9HCG8 908 aaKnown RBP22.29■■□□□ 1.16
DDX55-211ENST00000544429 PNMA2Q9UL42 364 aa22.29■■□□□ 1.16
DDX55-211ENST00000544429 BRPF3Q9ULD4 1205 aa22.29■■□□□ 1.16
DDX55-211ENST00000544429 CCDC69A6NI79 296 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 HMGCRP04035 888 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 CALM1P0DP23 149 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 CALM2P0DP24 149 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 CALM3P0DP25 149 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 CASTP20810 708 aaKnown RBP22.28■■□□□ 1.16
DDX55-211ENST00000544429 CCL14Q16627 93 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 RUFY3Q7L099 469 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 ACAD9Q9H845 621 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 RNF146Q9NTX7 359 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 FLRT1Q9NZU1 646 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 CCPG1Q9ULG6 757 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 DIS3Q9Y2L1 958 aaKnown RBP22.28■■□□□ 1.16
DDX55-211ENST00000544429 SLC12A7Q9Y666 1083 aa22.28■■□□□ 1.16
DDX55-211ENST00000544429 INHAP05111 366 aa22.27■■□□□ 1.16
DDX55-211ENST00000544429 SMARCA1P28370 1054 aa22.27■■□□□ 1.16
DDX55-211ENST00000544429 RCAN1P53805 252 aa22.27■■□□□ 1.16
DDX55-211ENST00000544429 EVCP57679 992 aa22.27■■□□□ 1.16
DDX55-211ENST00000544429 KCTD2Q14681 263 aa22.27■■□□□ 1.16
DDX55-211ENST00000544429 CDC37Q16543 378 aaPredicted RBP22.27■■□□□ 1.16
DDX55-211ENST00000544429 ZNF792Q3KQV3 632 aa22.27■■□□□ 1.16
DDX55-211ENST00000544429 MUM1L1Q5H9M0 696 aa22.27■■□□□ 1.16
DDX55-211ENST00000544429 NFXL1Q6ZNB6 911 aa22.27■■□□□ 1.16
DDX55-211ENST00000544429 TRERF1Q96PN7 1200 aa22.27■■□□□ 1.16
DDX55-211ENST00000544429 ALAS1P13196 640 aa22.26■■□□□ 1.15
DDX55-211ENST00000544429 TAL1P17542 331 aaPredicted RBP22.26■■□□□ 1.15
DDX55-211ENST00000544429 KIF5BP33176 963 aa22.26■■□□□ 1.15
DDX55-211ENST00000544429 QRICH1Q2TAL8 776 aa22.26■■□□□ 1.15
DDX55-211ENST00000544429 OLFML2BQ68BL8 750 aa22.26■■□□□ 1.15
DDX55-211ENST00000544429 NUP133Q8WUM0 1156 aa22.26■■□□□ 1.15
DDX55-211ENST00000544429 CLEC4DQ8WXI8 215 aa22.26■■□□□ 1.15
DDX55-211ENST00000544429 SPZ1Q9BXG8 430 aa22.26■■□□□ 1.15
DDX55-211ENST00000544429 NID2Q14112 1375 aa22.25■■□□□ 1.15
DDX55-211ENST00000544429 PGK2P07205 417 aa22.25■■□□□ 1.15
DDX55-211ENST00000544429 TRIM32Q13049 653 aa22.25■■□□□ 1.15
DDX55-211ENST00000544429 MTFR1Q15390 333 aa22.25■■□□□ 1.15
DDX55-211ENST00000544429 Q6ZUG5 572 aa22.25■■□□□ 1.15
DDX55-211ENST00000544429 DPP9Q86TI2 863 aa22.25■■□□□ 1.15
DDX55-211ENST00000544429 FANCBQ8NB91 859 aa22.25■■□□□ 1.15
DDX55-211ENST00000544429 CTCFLQ8NI51 663 aaPredicted RBP22.25■■□□□ 1.15
DDX55-211ENST00000544429 MAML3Q96JK9 1138 aa22.25■■□□□ 1.15
DDX55-211ENST00000544429 FGD4Q96M96 766 aa22.25■■□□□ 1.15
DDX55-211ENST00000544429 A1CFQ9NQ94 594 aaKnown RBP22.25■■□□□ 1.15
DDX55-211ENST00000544429 HOMER2Q9NSB8 354 aa22.25■■□□□ 1.15
DDX55-211ENST00000544429 CCDC85CA6NKD9 419 aa22.24■■□□□ 1.15
DDX55-211ENST00000544429 PPP1R11O60927 126 aaPredicted RBP22.24■■□□□ 1.15
DDX55-211ENST00000544429 RXRAP19793 462 aa22.24■■□□□ 1.15
DDX55-211ENST00000544429 FAM133AQ8N9E0 248 aa22.24■■□□□ 1.15
DDX55-211ENST00000544429 LZTS2Q9BRK4 669 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms