RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 WASF1Q92558 559 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 MKNK2Q9HBH9 465 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 SAMSN1Q9NSI8 373 aaKnown RBP16.97■□□□□ 0.31
CHFR-223ENST00000544268 IMPACTQ9P2X3 320 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 CD2APQ9Y5K6 639 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 GTF2A1P52655 376 aaPredicted RBP16.97■□□□□ 0.31
CHFR-223ENST00000544268 RBM5P52756 815 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHFR-223ENST00000544268 NPY5RQ15761 445 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 RILPL1Q5EBL4 403 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 C10orf67Q8IYJ2 551 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 SMARCE1Q969G3 411 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 MRIQ9BWK5 157 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 TMX1Q9H3N1 280 aa16.97■□□□□ 0.31
CHFR-223ENST00000544268 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHFR-223ENST00000544268 TFAP4Q01664 338 aa16.96■□□□□ 0.31
CHFR-223ENST00000544268 SRBD1Q8N5C6 995 aaKnown RBP16.96■□□□□ 0.31
CHFR-223ENST00000544268 MTMR7Q9Y216 660 aa16.96■□□□□ 0.31
CHFR-223ENST00000544268 PSME4Q14997 1843 aa16.96■□□□□ 0.31
CHFR-223ENST00000544268 PSMD14O00487 310 aa16.96■□□□□ 0.3
CHFR-223ENST00000544268 STX17P56962 302 aa16.96■□□□□ 0.3
CHFR-223ENST00000544268 HDLBPQ00341 1268 aaKnown RBP16.96■□□□□ 0.3
CHFR-223ENST00000544268 NFIAQ12857 509 aa16.96■□□□□ 0.3
CHFR-223ENST00000544268 ICE2Q659A1 982 aa16.96■□□□□ 0.3
CHFR-223ENST00000544268 FAM43BQ6ZT52 329 aaPredicted RBP16.96■□□□□ 0.3
CHFR-223ENST00000544268 NFE2L3Q9Y4A8 694 aa16.96■□□□□ 0.3
CHFR-223ENST00000544268 SRPRBQ9Y5M8 271 aaKnown RBP16.96■□□□□ 0.3
CHFR-223ENST00000544268 RASA1P20936 1047 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 CDK8P49336 464 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 CACNB3P54284 484 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 KLHL10Q6JEL2 608 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 C16orf86Q6ZW13 317 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 PHF20Q9BVI0 1012 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 SERPINA10Q9UK55 444 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 BCS1LQ9Y276 419 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 LOC102724159A0A0B4J2E5 919 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 CCDC196A0A1B0GTZ2 297 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 TRIM66O15016 1216 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 CD44P16070 742 aaKnown RBP16.95■□□□□ 0.3
CHFR-223ENST00000544268 ADKP55263 362 aaKnown RBP16.95■□□□□ 0.3
CHFR-223ENST00000544268 PWP2Q15269 919 aaKnown RBP16.95■□□□□ 0.3
CHFR-223ENST00000544268 RSBN1LQ6PCB5 846 aaPredicted RBP16.95■□□□□ 0.3
CHFR-223ENST00000544268 RASGRP2Q7LDG7 609 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 FAM177A1Q8N128 213 aaPredicted RBP16.95■□□□□ 0.3
CHFR-223ENST00000544268 CCDC150Q8NCX0 1101 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 VPS33BQ9H267 617 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 TAOK3Q9H2K8 898 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 MYH6P13533 1939 aa16.95■□□□□ 0.3
CHFR-223ENST00000544268 FER1L6Q2WGJ9 1857 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 CDC25AP30304 524 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 AKAP17AQ02040 695 aaKnown RBP16.94■□□□□ 0.3
CHFR-223ENST00000544268 CATIPQ7Z7H3 387 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 VSTM4Q8IW00 320 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
CHFR-223ENST00000544268 GOLGA5Q8TBA6 731 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 SYMPKQ92797 1274 aaKnown RBP16.94■□□□□ 0.3
CHFR-223ENST00000544268 RNF26Q9BY78 433 aaPredicted RBP16.94■□□□□ 0.3
CHFR-223ENST00000544268 NFKBIEO00221 500 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 VIL1P09327 827 aaKnown RBP16.94■□□□□ 0.3
CHFR-223ENST00000544268 SARSP49591 514 aaKnown RBP16.94■□□□□ 0.3
CHFR-223ENST00000544268 RCSD1Q6JBY9 416 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 NIM1KQ8IY84 436 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 NLGN2Q8NFZ4 835 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 UBXN4Q92575 508 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 LCMT1Q9UIC8 334 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 ZNRF3Q9ULT6 936 aa16.94■□□□□ 0.3
CHFR-223ENST00000544268 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
CHFR-223ENST00000544268 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
CHFR-223ENST00000544268 RCAN1P53805 252 aa16.93■□□□□ 0.3
CHFR-223ENST00000544268 MORC3Q14149 939 aa16.93■□□□□ 0.3
CHFR-223ENST00000544268 SRLQ86TD4 932 aa16.93■□□□□ 0.3
CHFR-223ENST00000544268 ZFPM1Q8IX07 1006 aa16.93■□□□□ 0.3
CHFR-223ENST00000544268 BRMS1Q9HCU9 246 aa16.93■□□□□ 0.3
CHFR-223ENST00000544268 ZBTB12Q9Y330 459 aaPredicted RBP16.93■□□□□ 0.3
CHFR-223ENST00000544268 VWA3AA6NCI4 1184 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 TRIM75PA6NK02 468 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 TPM1P09493 284 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 KRT2P35908 639 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 RASGRP4Q8TDF6 673 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 ZNF287Q9HBT7 754 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 PSD3Q9NYI0 1048 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 TOP1P11387 765 aaKnown RBP16.92■□□□□ 0.3
CHFR-223ENST00000544268 TMTC3Q6ZXV5 915 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 TMEM139Q8IV31 216 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 GOLGA6L1Q8N7Z2 621 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 GMLQ99445 158 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 BLZF1Q9H2G9 400 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 CNTNAP5Q8WYK1 1306 aa16.92■□□□□ 0.3
CHFR-223ENST00000544268 TCP10Q12799 353 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 DPYDQ12882 1025 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 IL17AQ16552 155 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 PIK3AP1Q6ZUJ8 805 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 GPKOWQ92917 476 aaPredicted RBP eCLIP16.91■□□□□ 0.3
CHFR-223ENST00000544268 TNFRSF25Q93038 417 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 PRMT6Q96LA8 375 aaPredicted RBP16.91■□□□□ 0.3
CHFR-223ENST00000544268 MYO3BQ8WXR4 1341 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 TEX33O43247 280 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 PRPF3O43395 683 aaKnown RBP16.91■□□□□ 0.3
CHFR-223ENST00000544268 ZNF18P17022 549 aa16.91■□□□□ 0.3
CHFR-223ENST00000544268 OAS2P29728 719 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms