RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 THEGQ9P2T0 379 aa14.14□□□□□ -0.15
GABPB1-206ENST00000543881 MROH7Q68CQ1 1323 aa14.14□□□□□ -0.15
GABPB1-206ENST00000543881 MYADML2A6NDP7 307 aa14.13□□□□□ -0.15
GABPB1-206ENST00000543881 F5H6K3 240 aa14.13□□□□□ -0.15
GABPB1-206ENST00000543881 SNAI1O95863 264 aaPredicted RBP14.13□□□□□ -0.15
GABPB1-206ENST00000543881 CSF2RAP15509 400 aa14.13□□□□□ -0.15
GABPB1-206ENST00000543881 CDK7P50613 346 aa14.13□□□□□ -0.15
GABPB1-206ENST00000543881 KLRC3Q07444 240 aa14.13□□□□□ -0.15
GABPB1-206ENST00000543881 RASIP1Q5U651 963 aa14.13□□□□□ -0.15
GABPB1-206ENST00000543881 MSL3Q8N5Y2 521 aaKnown RBP14.13□□□□□ -0.15
GABPB1-206ENST00000543881 ADAMTS19Q8TE59 1207 aa14.13□□□□□ -0.15
GABPB1-206ENST00000543881 GLT1D1Q96MS3 346 aa14.13□□□□□ -0.15
GABPB1-206ENST00000543881 ZHX1Q9UKY1 873 aaPredicted RBP14.13□□□□□ -0.15
GABPB1-206ENST00000543881 ELP1O95163 1332 aa14.13□□□□□ -0.15
GABPB1-206ENST00000543881 SYNGAP1Q96PV0 1343 aa14.13□□□□□ -0.15
GABPB1-206ENST00000543881 DUSP11O75319 330 aaKnown RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 NDUFB10O96000 172 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 IRX5P78411 483 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 MRPS5P82675 430 aaKnown RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 HDAC1Q13547 482 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 LRRFIP1Q32MZ4 808 aaKnown RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 ZNF444Q8N0Y2 327 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 TMEM199Q8N511 208 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 DDX11Q96FC9 970 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 CEP95Q96GE4 821 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 YTHDC1Q96MU7 727 aaKnown RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 CLIP2Q9UDT6 1046 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 ASGR1P07306 291 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 C6orf222P0C671 652 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 ACRP10323 421 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 CST5P28325 142 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 ADGRE1Q14246 886 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 CCDC85BQ15834 202 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 MAMDC4Q6UXC1 1216 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 ZNF365Q70YC5 407 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 PCSK9Q8NBP7 692 aaKnown RBP14.12□□□□□ -0.15
GABPB1-206ENST00000543881 MKL1Q969V6 931 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 VTI1AQ96AJ9 217 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 TEX13BQ9BXU2 312 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 PPP1R12CQ9BZL4 782 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 MTMR4Q9NYA4 1195 aa14.12□□□□□ -0.15
GABPB1-206ENST00000543881 ARVCFO00192 962 aa14.11□□□□□ -0.15
GABPB1-206ENST00000543881 IGFBP4P22692 258 aa14.11□□□□□ -0.15
GABPB1-206ENST00000543881 PDE1AP54750 535 aa14.11□□□□□ -0.15
GABPB1-206ENST00000543881 PPARAQ07869 468 aa14.11□□□□□ -0.15
GABPB1-206ENST00000543881 SNRNP48Q6IEG0 339 aaKnown RBP14.11□□□□□ -0.15
GABPB1-206ENST00000543881 PSRC1Q6PGN9 363 aaPredicted RBP14.11□□□□□ -0.15
GABPB1-206ENST00000543881 UHRF1Q96T88 793 aaPredicted RBP14.11□□□□□ -0.15
GABPB1-206ENST00000543881 NACAP1Q9BZK3 213 aa14.11□□□□□ -0.15
GABPB1-206ENST00000543881 NAPBQ9H115 298 aa14.11□□□□□ -0.15
GABPB1-206ENST00000543881 SPC25Q9HBM1 224 aa14.11□□□□□ -0.15
GABPB1-206ENST00000543881 MSRAQ9UJ68 235 aa14.11□□□□□ -0.15
GABPB1-206ENST00000543881 RIPK3Q9Y572 518 aa14.11□□□□□ -0.15
GABPB1-206ENST00000543881 MYH4Q9Y623 1939 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 PLIN4Q96Q06 1357 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 DNAJC25-GNG10A0A024R161 153 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 A0A0U1RQG5 324 aaPredicted RBP14.1□□□□□ -0.15
GABPB1-206ENST00000543881 TLR3O15455 904 aaKnown RBP14.1□□□□□ -0.15
GABPB1-206ENST00000543881 ACVR2BQ13705 512 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 RAB30Q15771 203 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 GNASQ5JWF2 1037 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 VPS53Q5VIR6 699 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 FAM126BQ8IXS8 530 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 LRRC47Q8N1G4 583 aaKnown RBP14.1□□□□□ -0.15
GABPB1-206ENST00000543881 IL27Q8NEV9 243 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 NEDD1Q8NHV4 660 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 SLF1Q9BQI6 1058 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 ZNF287Q9HBT7 754 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 INCENPQ9NQS7 918 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 MCM3APO60318 1980 aa14.1□□□□□ -0.15
GABPB1-206ENST00000543881 CHD9Q3L8U1 2897 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 ADCY6O43306 1168 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 TTLL1O95922 423 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 SLC4A3P48751 1232 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 GJA9P57773 515 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 TFAP4Q01664 338 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 PDE4BQ07343 736 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 CCDC144BQ3MJ40 725 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 ZNF467Q7Z7K2 595 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-206ENST00000543881 HERVK_113Q902F9 699 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 EVI5LQ96CN4 794 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 UPF3AQ9H1J1 476 aaKnown RBP14.09□□□□□ -0.15
GABPB1-206ENST00000543881 NKX2-4Q9H2Z4 354 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-206ENST00000543881 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.09□□□□□ -0.15
GABPB1-206ENST00000543881 GBF1Q92538 1859 aa14.09□□□□□ -0.15
GABPB1-206ENST00000543881 TSPY3P0CV98 308 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 TSPY8P0CW00 308 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 CYP2C18P33260 490 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 PLA2G5P39877 138 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 CTDSPL2Q05D32 466 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 CPXCR1Q8N123 301 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 PRPF38AQ8NAV1 312 aaKnown RBP14.08□□□□□ -0.16
GABPB1-206ENST00000543881 GMCL1P1Q8NEA9 526 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 FAM227BQ96M60 508 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 MTIF3Q9H2K0 278 aaKnown RBP14.08□□□□□ -0.16
GABPB1-206ENST00000543881 ABHD16BQ9H3Z7 469 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 IL23AQ9NPF7 189 aa14.08□□□□□ -0.16
GABPB1-206ENST00000543881 CXXC1Q9P0U4 656 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms