RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 SLC38A10Q9HBR0 1119 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 FLRT1Q9NZU1 646 aa11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ZNF214Q9UL59 606 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-214ENST00000543048 MCM3APO60318 1980 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 MYH6P13533 1939 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 FARP2O94887 1054 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 KCTD2Q14681 263 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 IMMTQ16891 758 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CCDC178Q5BJE1 867 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 PRPF38BQ5VTL8 546 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 OLFML2BQ68BL8 750 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 SNRNP48Q6IEG0 339 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 UBE2Q1Q7Z7E8 422 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CPXCR1Q8N123 301 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 DCAF4Q8WV16 495 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ESR2Q92731 530 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CHMP4CQ96CF2 233 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TMEM47Q9BQJ4 181 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TEX13BQ9BXU2 312 aa11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ISY1Q9ULR0 285 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-214ENST00000543048 RAD50Q92878 1312 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 IGHA2P01877 340 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CCND3P30281 292 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 STAT2P52630 851 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 OAZ1P54368 228 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 IKQ13123 557 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 ERICH6BQ5W0A0 696 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 KCTD1Q719H9 257 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 CENPQQ7L2Z9 268 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 TBC1D10CQ8IV04 446 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 DPF3Q92784 378 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 HTATIP2Q9BUP3 242 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 RAVER2Q9HCJ3 691 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 OGDHLQ9ULD0 1010 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 MTMR7Q9Y216 660 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 DIS3Q9Y2L1 958 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 RIPK3Q9Y572 518 aa11.46□□□□□ -0.57
TNFRSF1A-214ENST00000543048 FRMPD3Q5JV73 1810 aa11.46□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CNGA1P29973 690 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CYP2C19P33261 490 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ZNF792Q3KQV3 632 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 NECAB2Q7Z6G3 386 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 IQCA1Q86XH1 822 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 DGKHQ86XP1 1220 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CHST13Q8NET6 341 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 DDX11Q96FC9 970 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 PAWRQ96IZ0 340 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 MAML3Q96JK9 1138 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 KRT23Q9C075 422 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CNNM2Q9H8M5 875 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ZSWIM5Q9P217 1185 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 FBXO40Q9UH90 709 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ALPK3Q96L96 1907 aa11.45□□□□□ -0.58
TNFRSF1A-214ENST00000543048 B4E1Z4 1266 aa11.44□□□□□ -0.58
TNFRSF1A-214ENST00000543048 KDM4AO75164 1064 aa11.44□□□□□ -0.58
TNFRSF1A-214ENST00000543048 PGK2P07205 417 aa11.44□□□□□ -0.58
TNFRSF1A-214ENST00000543048 BTNL9Q6UXG8 535 aa11.44□□□□□ -0.58
TNFRSF1A-214ENST00000543048 TRPV1Q8NER1 839 aa11.44□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ANKS1AQ92625 1134 aa11.44□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ZKSCAN3Q9BRR0 538 aa11.44□□□□□ -0.58
TNFRSF1A-214ENST00000543048 IL25Q9H293 177 aa11.44□□□□□ -0.58
TNFRSF1A-214ENST00000543048 PRR12Q9ULL5 1215 aa11.44□□□□□ -0.58
TNFRSF1A-214ENST00000543048 NEDD4P46934 1319 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 SGSM2O43147 1006 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 MSCO60682 206 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 PTH1RQ03431 593 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 TKFCQ3LXA3 575 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 TTBK2Q6IQ55 1244 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ANKRD35Q8N283 1001 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 AGBL1Q96MI9 1066 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ZSCAN10Q96SZ4 725 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 TINF2Q9BSI4 451 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 GPCPD1Q9NPB8 672 aa11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 DDX20Q9UHI6 824 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 BAZ2BQ9UIF8 2168 aaKnown RBP11.43□□□□□ -0.58
TNFRSF1A-214ENST00000543048 ZNF536O15090 1300 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 DNAJC25-GNG10A0A024R161 153 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 PDHBP11177 359 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CYBAP13498 195 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 SLC16A2P36021 539 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 SNAP25P60880 206 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 TRDNQ13061 729 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 SYDE2Q5VT97 1194 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 CCDC174Q6PII3 467 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 KIAA1211Q6ZU35 1233 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 MSL3Q8N5Y2 521 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 DIS3LQ8TF46 1054 aaKnown RBP11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 MAP4K1Q92918 833 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 TRERF1Q96PN7 1200 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 C11orf49Q9H6J7 331 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 KAT14Q9H8E8 782 aa11.42□□□□□ -0.58
TNFRSF1A-214ENST00000543048 NRBP1Q9UHY1 535 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms