RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 ZNF865P0CJ78 1059 aaPredicted RBP23.85■■□□□ 1.41
DDB1-220ENST00000542337 MAGEA10P43363 369 aaPredicted RBP23.85■■□□□ 1.41
DDB1-220ENST00000542337 TTC14Q96N46 770 aa23.85■■□□□ 1.41
DDB1-220ENST00000542337 LBHD1Q9BQE6 289 aaPredicted RBP23.85■■□□□ 1.41
DDB1-220ENST00000542337 UBE2OQ9C0C9 1292 aaKnown RBP23.85■■□□□ 1.41
DDB1-220ENST00000542337 FAM184BQ9ULE4 1060 aa23.85■■□□□ 1.41
DDB1-220ENST00000542337 TAL1P17542 331 aaPredicted RBP23.84■■□□□ 1.41
DDB1-220ENST00000542337 NT5C2P49902 561 aa23.84■■□□□ 1.41
DDB1-220ENST00000542337 RTP1P59025 263 aa23.84■■□□□ 1.41
DDB1-220ENST00000542337 CCDC174Q6PII3 467 aa23.84■■□□□ 1.41
DDB1-220ENST00000542337 SLC39A5Q6ZMH5 540 aa23.84■■□□□ 1.41
DDB1-220ENST00000542337 ESR2Q92731 530 aa23.84■■□□□ 1.41
DDB1-220ENST00000542337 AGBL1Q96MI9 1066 aa23.84■■□□□ 1.41
DDB1-220ENST00000542337 TRERF1Q96PN7 1200 aa23.84■■□□□ 1.41
DDB1-220ENST00000542337 TMEM47Q9BQJ4 181 aa23.84■■□□□ 1.41
DDB1-220ENST00000542337 RNF146Q9NTX7 359 aa23.84■■□□□ 1.41
DDB1-220ENST00000542337 ZHX1Q9UKY1 873 aaPredicted RBP23.84■■□□□ 1.41
DDB1-220ENST00000542337 PRR12Q9ULL5 1215 aa23.84■■□□□ 1.41
DDB1-220ENST00000542337 POTEB2H3BUK9 544 aa23.83■■□□□ 1.41
DDB1-220ENST00000542337 ALAS1P13196 640 aa23.83■■□□□ 1.41
DDB1-220ENST00000542337 ADCYAP1R1P41586 468 aa23.83■■□□□ 1.41
DDB1-220ENST00000542337 CTNNA3Q9UI47 895 aa23.83■■□□□ 1.41
DDB1-220ENST00000542337 ATP11BQ9Y2G3 1177 aa23.83■■□□□ 1.41
DDB1-220ENST00000542337 SNAI1O95863 264 aaPredicted RBP23.82■■□□□ 1.4
DDB1-220ENST00000542337 PGK1P00558 417 aa23.82■■□□□ 1.4
DDB1-220ENST00000542337 ACVR2BQ13705 512 aa23.82■■□□□ 1.4
DDB1-220ENST00000542337 CCDC178Q5BJE1 867 aa23.82■■□□□ 1.4
DDB1-220ENST00000542337 FERMT2Q96AC1 680 aa23.82■■□□□ 1.4
DDB1-220ENST00000542337 ABHD16BQ9H3Z7 469 aa23.82■■□□□ 1.4
DDB1-220ENST00000542337 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.82■■□□□ 1.4
DDB1-220ENST00000542337 ZNFX1Q9P2E3 1918 aaKnown RBP23.82■■□□□ 1.4
DDB1-220ENST00000542337 ALPK3Q96L96 1907 aa23.81■■□□□ 1.4
DDB1-220ENST00000542337 SPC25Q9HBM1 224 aa23.81■■□□□ 1.4
DDB1-220ENST00000542337 PNMA2Q9UL42 364 aa23.81■■□□□ 1.4
DDB1-220ENST00000542337 CCPG1Q9ULG6 757 aa23.81■■□□□ 1.4
DDB1-220ENST00000542337 ZNF536O15090 1300 aa23.81■■□□□ 1.4
DDB1-220ENST00000542337 SNAP25P60880 206 aa23.8■■□□□ 1.4
DDB1-220ENST00000542337 MDM2Q00987 491 aaPredicted RBP23.8■■□□□ 1.4
DDB1-220ENST00000542337 IMMTQ16891 758 aaKnown RBP23.8■■□□□ 1.4
DDB1-220ENST00000542337 SYDE2Q5VT97 1194 aa23.8■■□□□ 1.4
DDB1-220ENST00000542337 IQCA1Q86XH1 822 aa23.8■■□□□ 1.4
DDB1-220ENST00000542337 TBC1D10CQ8IV04 446 aa23.8■■□□□ 1.4
DDB1-220ENST00000542337 TSEN34Q9BSV6 310 aaKnown RBP23.8■■□□□ 1.4
DDB1-220ENST00000542337 DSCC1Q9BVC3 393 aa23.8■■□□□ 1.4
DDB1-220ENST00000542337 GPCPD1Q9NPB8 672 aa23.8■■□□□ 1.4
DDB1-220ENST00000542337 PHF24Q9UPV7 400 aa23.8■■□□□ 1.4
DDB1-220ENST00000542337 ASB14A6NK59 587 aa23.79■■□□□ 1.4
DDB1-220ENST00000542337 ICAM1P05362 532 aa23.79■■□□□ 1.4
DDB1-220ENST00000542337 BTNL9Q6UXG8 535 aa23.79■■□□□ 1.4
DDB1-220ENST00000542337 ARMCX2Q7L311 632 aa23.79■■□□□ 1.4
DDB1-220ENST00000542337 TDHQ8IZJ6 230 aa23.79■■□□□ 1.4
DDB1-220ENST00000542337 A1CFQ9NQ94 594 aaKnown RBP23.79■■□□□ 1.4
DDB1-220ENST00000542337 RANBP2P49792 3224 aaKnown RBP23.79■■□□□ 1.4
DDB1-220ENST00000542337 FRMPD3Q5JV73 1810 aa23.78■■□□□ 1.4
DDB1-220ENST00000542337 DUSP11O75319 330 aaKnown RBP23.78■■□□□ 1.4
DDB1-220ENST00000542337 SLC16A2P36021 539 aa23.78■■□□□ 1.4
DDB1-220ENST00000542337 TTBK2Q6IQ55 1244 aa23.78■■□□□ 1.4
DDB1-220ENST00000542337 DGKHQ86XP1 1220 aa23.78■■□□□ 1.4
DDB1-220ENST00000542337 CCDC144CPQ8IYA2 1237 aa23.78■■□□□ 1.4
DDB1-220ENST00000542337 FAM133AQ8N9E0 248 aa23.78■■□□□ 1.4
DDB1-220ENST00000542337 NUP133Q8WUM0 1156 aa23.78■■□□□ 1.4
DDB1-220ENST00000542337 RANBP17Q9H2T7 1088 aaKnown RBP23.78■■□□□ 1.4
DDB1-220ENST00000542337 FRMPD2Q68DX3 1309 aaPredicted RBP23.78■■□□□ 1.4
DDB1-220ENST00000542337 IRX6P78412 446 aaPredicted RBP23.77■■□□□ 1.4
DDB1-220ENST00000542337 CNTN2Q02246 1040 aa23.77■■□□□ 1.4
DDB1-220ENST00000542337 TRIM60Q495X7 471 aa23.77■■□□□ 1.4
DDB1-220ENST00000542337 C1orf53Q5VUE5 145 aa23.77■■□□□ 1.4
DDB1-220ENST00000542337 RASGRP2Q7LDG7 609 aa23.77■■□□□ 1.4
DDB1-220ENST00000542337 PRDM5Q9NQX1 630 aaPredicted RBP23.77■■□□□ 1.4
DDB1-220ENST00000542337 PDHBP11177 359 aa23.76■■□□□ 1.39
DDB1-220ENST00000542337 SNX17Q15036 470 aa23.76■■□□□ 1.39
DDB1-220ENST00000542337 CCDC144BQ3MJ40 725 aa23.76■■□□□ 1.39
DDB1-220ENST00000542337 TTC22Q5TAA0 569 aa23.76■■□□□ 1.39
DDB1-220ENST00000542337 NSMFQ6X4W1 530 aa23.76■■□□□ 1.39
DDB1-220ENST00000542337 RUFY2Q8WXA3 655 aa23.76■■□□□ 1.39
DDB1-220ENST00000542337 LENG1Q96BZ8 264 aaPredicted RBP23.76■■□□□ 1.39
DDB1-220ENST00000542337 FGD4Q96M96 766 aa23.76■■□□□ 1.39
DDB1-220ENST00000542337 KRT23Q9C075 422 aa23.76■■□□□ 1.39
DDB1-220ENST00000542337 PLXNA1Q9UIW2 1896 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 MOXD2PA6NHM9 499 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 KDM4AO75164 1064 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 ADAMTS4O75173 837 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 ZNF543Q08ER8 600 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 GPATCH4Q5T3I0 446 aaKnown RBP23.75■■□□□ 1.39
DDB1-220ENST00000542337 NOL8Q76FK4 1167 aaKnown RBP23.75■■□□□ 1.39
DDB1-220ENST00000542337 PCSK9Q8NBP7 692 aaKnown RBP23.75■■□□□ 1.39
DDB1-220ENST00000542337 ZKSCAN3Q9BRR0 538 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 KAT14Q9H8E8 782 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 CNNM2Q9H8M5 875 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 CYP39A1Q9NYL5 469 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 NEDD4P46934 1319 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 SYNRGQ9UMZ2 1314 aa23.75■■□□□ 1.39
DDB1-220ENST00000542337 A0A1W2PQ45 241 aaPredicted RBP23.74■■□□□ 1.39
DDB1-220ENST00000542337 A0A1W2PQY0 241 aa23.74■■□□□ 1.39
DDB1-220ENST00000542337 C6orf222P0C671 652 aaPredicted RBP23.74■■□□□ 1.39
DDB1-220ENST00000542337 ACLYP53396 1101 aa23.74■■□□□ 1.39
DDB1-220ENST00000542337 LRIT3Q3SXY7 679 aa23.74■■□□□ 1.39
DDB1-220ENST00000542337 MUM1L1Q5H9M0 696 aa23.74■■□□□ 1.39
DDB1-220ENST00000542337 STARD7Q9NQZ5 370 aa23.74■■□□□ 1.39
DDB1-220ENST00000542337 SOWAHBA6NEL2 793 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms