RNA–Protein interactions for RNA: ENST00000542142.1

MMP17-208, Transcript of matrix metallopeptidase 17, humanhuman

TSL 4

Gene MMP17, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-208ENST00000542142 PARP1P09874 1014 aaKnown RBP18.29■□□□□ 0.52
MMP17-208ENST00000542142 PRKAR2AP13861 404 aaKnown RBP18.29■□□□□ 0.52
MMP17-208ENST00000542142 MCM5P33992 734 aa18.29■□□□□ 0.52
MMP17-208ENST00000542142 CACNB2Q08289 660 aaPredicted RBP18.29■□□□□ 0.52
MMP17-208ENST00000542142 WTAPQ15007 396 aa18.29■□□□□ 0.52
MMP17-208ENST00000542142 TKFCQ3LXA3 575 aa18.29■□□□□ 0.52
MMP17-208ENST00000542142 MFSD14CQ5VZR4 134 aa18.29■□□□□ 0.52
MMP17-208ENST00000542142 OLFML2BQ68BL8 750 aa18.29■□□□□ 0.52
MMP17-208ENST00000542142 CCDC174Q6PII3 467 aa18.29■□□□□ 0.52
MMP17-208ENST00000542142 IGDCC4Q8TDY8 1250 aa18.29■□□□□ 0.52
MMP17-208ENST00000542142 HMX1Q9NP08 348 aaPredicted RBP18.29■□□□□ 0.52
MMP17-208ENST00000542142 PRC1O43663 620 aa18.28■□□□□ 0.52
MMP17-208ENST00000542142 PGK2P07205 417 aa18.28■□□□□ 0.52
MMP17-208ENST00000542142 GJA8P48165 433 aa18.28■□□□□ 0.52
MMP17-208ENST00000542142 MLLT1Q03111 559 aaPredicted RBP18.28■□□□□ 0.52
MMP17-208ENST00000542142 TSGA10IPQ3SY00 556 aa18.28■□□□□ 0.52
MMP17-208ENST00000542142 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
MMP17-208ENST00000542142 MAML3Q96JK9 1138 aa18.28■□□□□ 0.52
MMP17-208ENST00000542142 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.52
MMP17-208ENST00000542142 ACAD9Q9H845 621 aa18.28■□□□□ 0.52
MMP17-208ENST00000542142 HOMER2Q9NSB8 354 aa18.28■□□□□ 0.52
MMP17-208ENST00000542142 CCPG1Q9ULG6 757 aa18.28■□□□□ 0.52
MMP17-208ENST00000542142 DIS3Q9Y2L1 958 aaKnown RBP18.28■□□□□ 0.52
MMP17-208ENST00000542142 RBBP6Q7Z6E9 1792 aaKnown RBP18.27■□□□□ 0.52
MMP17-208ENST00000542142 ALAS1P13196 640 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 CAPN2P17655 700 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 ZNF792Q3KQV3 632 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 ANKRD35Q8N283 1001 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 U2AF1L4Q8WU68 220 aaKnown RBP18.27■□□□□ 0.52
MMP17-208ENST00000542142 TMEM87BQ96K49 555 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 DEFB118Q96PH6 123 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 TRERF1Q96PN7 1200 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 UBA5Q9GZZ9 404 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 SENP2Q9HC62 589 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 RNF146Q9NTX7 359 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 PNMA2Q9UL42 364 aa18.27■□□□□ 0.52
MMP17-208ENST00000542142 DNAJC25-GNG10A0A024R161 153 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 SGPL1O95470 568 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 CYP2C19P33261 490 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 KRT32Q14532 448 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 CATIPQ7Z7H3 387 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 RASEFQ8IZ41 740 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 TMTC2Q8N394 836 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 NEK1Q96PY6 1258 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 CPVLQ9H3G5 476 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 LY9Q9HBG7 655 aa18.26■□□□□ 0.51
MMP17-208ENST00000542142 EPB41L2O43491 1005 aaKnown RBP18.25■□□□□ 0.51
MMP17-208ENST00000542142 HSPA4P34932 840 aa18.25■□□□□ 0.51
MMP17-208ENST00000542142 TROAPQ12815 778 aa18.25■□□□□ 0.51
MMP17-208ENST00000542142 COL9A3Q14050 684 aaPredicted RBP18.25■□□□□ 0.51
MMP17-208ENST00000542142 ADGRF4Q8IZF3 695 aa18.25■□□□□ 0.51
MMP17-208ENST00000542142 KCNB2Q92953 911 aa18.25■□□□□ 0.51
MMP17-208ENST00000542142 MAD2L2Q9UI95 211 aa18.25■□□□□ 0.51
MMP17-208ENST00000542142 WDR19Q8NEZ3 1342 aa18.24■□□□□ 0.51
MMP17-208ENST00000542142 PALM3A6NDB9 673 aaPredicted RBP18.24■□□□□ 0.51
MMP17-208ENST00000542142 KLRF2D3W0D1 207 aa18.24■□□□□ 0.51
MMP17-208ENST00000542142 SH2B2O14492 632 aaPredicted RBP18.24■□□□□ 0.51
MMP17-208ENST00000542142 CCND3P30281 292 aaPredicted RBP18.24■□□□□ 0.51
MMP17-208ENST00000542142 LIFRP42702 1097 aa18.24■□□□□ 0.51
MMP17-208ENST00000542142 GRM4Q14833 912 aa18.24■□□□□ 0.51
MMP17-208ENST00000542142 STAG2Q8N3U4 1231 aa18.24■□□□□ 0.51
MMP17-208ENST00000542142 CRISPLD2Q9H0B8 497 aa18.24■□□□□ 0.51
MMP17-208ENST00000542142 A1CFQ9NQ94 594 aaKnown RBP18.24■□□□□ 0.51
MMP17-208ENST00000542142 GPHNQ9NQX3 736 aaPredicted RBP18.24■□□□□ 0.51
MMP17-208ENST00000542142 PFASO15067 1338 aa18.23■□□□□ 0.51
MMP17-208ENST00000542142 TFRCP02786 760 aaKnown RBP18.23■□□□□ 0.51
MMP17-208ENST00000542142 ADCK5Q3MIX3 580 aa18.23■□□□□ 0.51
MMP17-208ENST00000542142 MUM1L1Q5H9M0 696 aa18.23■□□□□ 0.51
MMP17-208ENST00000542142 ZNF467Q7Z7K2 595 aaPredicted RBP18.23■□□□□ 0.51
MMP17-208ENST00000542142 MSL3Q8N5Y2 521 aaKnown RBP18.23■□□□□ 0.51
MMP17-208ENST00000542142 MAP3K14Q99558 947 aa18.23■□□□□ 0.51
MMP17-208ENST00000542142 TINF2Q9BSI4 451 aa18.23■□□□□ 0.51
MMP17-208ENST00000542142 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
MMP17-208ENST00000542142 CCDC69A6NI79 296 aa18.22■□□□□ 0.51
MMP17-208ENST00000542142 DHX16O60231 1041 aaKnown RBP18.22■□□□□ 0.51
MMP17-208ENST00000542142 DDAH1O94760 285 aa18.22■□□□□ 0.51
MMP17-208ENST00000542142 HMGB1P09429 215 aaKnown RBP18.22■□□□□ 0.51
MMP17-208ENST00000542142 CYBAP13498 195 aa18.22■□□□□ 0.51
MMP17-208ENST00000542142 TAL1P17542 331 aaPredicted RBP18.22■□□□□ 0.51
MMP17-208ENST00000542142 EXOSC10Q01780 885 aaKnown RBP18.22■□□□□ 0.51
MMP17-208ENST00000542142 CDC37Q16543 378 aaPredicted RBP18.22■□□□□ 0.51
MMP17-208ENST00000542142 NFXL1Q6ZNB6 911 aa18.22■□□□□ 0.51
MMP17-208ENST00000542142 DHX32Q7L7V1 743 aaKnown RBP18.22■□□□□ 0.51
MMP17-208ENST00000542142 ZNF654Q8IZM8 581 aa18.22■□□□□ 0.51
MMP17-208ENST00000542142 NRBP1Q9UHY1 535 aa18.22■□□□□ 0.51
MMP17-208ENST00000542142 KIAA0100Q14667 2235 aaKnown RBP18.22■□□□□ 0.51
MMP17-208ENST00000542142 MKI67P46013 3256 aaKnown RBP18.21■□□□□ 0.51
MMP17-208ENST00000542142 POTEB2H3BUK9 544 aa18.21■□□□□ 0.51
MMP17-208ENST00000542142 MAMDC4Q6UXC1 1216 aa18.21■□□□□ 0.51
MMP17-208ENST00000542142 FAM133AQ8N9E0 248 aa18.21■□□□□ 0.51
MMP17-208ENST00000542142 TRPV1Q8NER1 839 aa18.21■□□□□ 0.51
MMP17-208ENST00000542142 LRRC2Q9BYS8 371 aa18.21■□□□□ 0.51
MMP17-208ENST00000542142 VAT1LQ9HCJ6 419 aa18.21■□□□□ 0.51
MMP17-208ENST00000542142 CYP39A1Q9NYL5 469 aa18.21■□□□□ 0.51
MMP17-208ENST00000542142 SNX14Q9Y5W7 946 aa18.21■□□□□ 0.51
MMP17-208ENST00000542142 SYNGAP1Q96PV0 1343 aa18.21■□□□□ 0.51
MMP17-208ENST00000542142 NFIBO00712 420 aa18.2■□□□□ 0.5
MMP17-208ENST00000542142 MSCO60682 206 aa18.2■□□□□ 0.5
MMP17-208ENST00000542142 CNGA1P29973 690 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms