RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SERTAD1Q9UHV2 236 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 ABCC12Q96J65 1359 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 PDE4DIPQ5VU43 2346 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 WDR19Q8NEZ3 1342 aa5.85□□□□□ -1.47
PROM1-220ENST00000540805 GOLGA8AA7E2F4 631 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 AP1G2O75843 785 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 ERCC5P28715 1186 aaPredicted RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 PEX19P40855 299 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 IL15P40933 162 aaPredicted RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 PPM1FP49593 454 aaPredicted RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 CTSWP56202 376 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 SPECC1Q5M775 1068 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 SLF2Q8IX21 1173 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 NOA1Q8NC60 698 aaKnown RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 N4BP2L2Q92802 583 aaPredicted RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 OSBP2Q969R2 916 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 CTAGE1Q96RT6 745 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 MYO6Q9UM54 1294 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 RTL9Q8NET4 1388 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 LOC102724428A0A0B4J2F2 783 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 WTIPA6NIX2 430 aaPredicted RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 ONECUT3O60422 494 aaPredicted RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 LGR5O75473 907 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 ERLIN2O94905 339 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 SIK1P57059 783 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 SF3A3Q12874 501 aaKnown RBP eCLIP5.84□□□□□ -1.47
PROM1-220ENST00000540805 NT5DC1Q5TFE4 455 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 KANK3Q6NY19 840 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 PI16Q6UXB8 463 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 SMIM5Q71RC9 77 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 PIK3R5Q8WYR1 880 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 CENPHQ9H3R5 247 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 QTRT2Q9H974 415 aaKnown RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 SYNRGQ9UMZ2 1314 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 IRS2Q9Y4H2 1338 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 DLEC1Q9Y238 1755 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 POLR2DO15514 142 aaKnown RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 CAND2O75155 1236 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 PRPF6O94906 941 aaKnown RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 SYF2O95926 243 aaKnown RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 CASP14P31944 242 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 USP8P40818 1118 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 SARSP49591 514 aaKnown RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 STIM1Q13586 685 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 SWT1Q5T5J6 900 aaKnown RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 NCAPH2Q6IBW4 605 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 MFSD6Q6ZSS7 791 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 TMTC1Q8IUR5 882 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 LARGE2Q8N3Y3 721 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 CAGE1Q8TC20 777 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 ZNF512BQ96KM6 892 aaPredicted RBP5.84□□□□□ -1.47
PROM1-220ENST00000540805 CRACR2AQ9BSW2 395 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 ZCWPW1Q9H0M4 648 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 HPCAL4Q9UM19 191 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 TACC3Q9Y6A5 838 aa5.84□□□□□ -1.47
PROM1-220ENST00000540805 MYH8P13535 1937 aa5.84□□□□□ -1.48
PROM1-220ENST00000540805 NRXN2Q9P2S2 1712 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 TCRBV5S4A2TA0A5A2 114 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 TRIM37O94972 964 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 FGAP02671 866 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 RPSAP08865 295 aaKnown RBP5.83□□□□□ -1.48
PROM1-220ENST00000540805 BAG6P46379 1132 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 DNA2P51530 1060 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 USP14P54578 494 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 EIF6P56537 245 aaKnown RBP5.83□□□□□ -1.48
PROM1-220ENST00000540805 CCDC181Q5TID7 509 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 SPATA1Q5VX52 437 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 CATIPQ7Z7H3 387 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 FAM76AQ8TAV0 307 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 MCM9Q9NXL9 1143 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 HDAC9Q9UKV0 1011 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 G3BP2Q9UN86 482 aaKnown RBP5.83□□□□□ -1.48
PROM1-220ENST00000540805 SLC4A4Q9Y6R1 1079 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 EBAG9O00559 213 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 ZFYP08048 801 aaPredicted RBP5.83□□□□□ -1.48
PROM1-220ENST00000540805 RXRAP19793 462 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 PBX1P40424 430 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 IARSP41252 1262 aaKnown RBP5.83□□□□□ -1.48
PROM1-220ENST00000540805 MCAMP43121 646 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 TNIP1Q15025 636 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 EAPPQ56P03 285 aaPredicted RBP5.83□□□□□ -1.48
PROM1-220ENST00000540805 SLC51AQ86UW1 340 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 GRAMD1CQ8IYS0 662 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 CUL5Q93034 780 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 PHKBQ93100 1093 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 KAT14Q9H8E8 782 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 ANGEL1Q9UNK9 670 aaKnown RBP5.83□□□□□ -1.48
PROM1-220ENST00000540805 LRRC37AA6NMS7 1700 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 CCDC196A0A1B0GTZ2 297 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 ITGA6P23229 1130 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 STX17P56962 302 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 AMPD2Q01433 879 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 CYP26C1Q6V0L0 522 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 POTEDQ86YR6 584 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 MIEF2Q96C03 454 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 MED15Q96RN5 788 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 SLC26A6Q9BXS9 759 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 ADD3Q9UEY8 706 aaKnown RBP5.83□□□□□ -1.48
PROM1-220ENST00000540805 GINS2Q9Y248 185 aa5.83□□□□□ -1.48
PROM1-220ENST00000540805 CDK5RAP2Q96SN8 1893 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms