RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 FAM169AQ9Y6X4 670 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 A0A087X0B3 334 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 LRRC31Q6UY01 552 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 CCDC121Q6ZUS5 278 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 ENAHQ8N8S7 591 aaPredicted RBP14.42□□□□□ -0.1
MSH6-210ENST00000540021 NKX2-3Q8TAU0 364 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 COG1Q8WTW3 980 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 RIPOR2Q9Y4F9 1068 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 MROH5Q6ZUA9 1318 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 ERVV-2B6SEH9 535 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 KLK7P49862 253 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 EARS2Q5JPH6 523 aaKnown RBP14.42□□□□□ -0.1
MSH6-210ENST00000540021 CEP85LQ5SZL2 805 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 NELFCDQ8IXH7 590 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 NUP58Q9BVL2 599 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 MAP3K15Q6ZN16 1313 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 TNNI2P48788 182 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 NFRKBQ6P4R8 1299 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 WDR19Q8NEZ3 1342 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 HPS3Q969F9 1004 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 NOX5Q96PH1 765 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 STK36Q9NRP7 1315 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 ANKIB1Q9P2G1 1089 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 A0A087WUV0 522 aaPredicted RBP14.41□□□□□ -0.1
MSH6-210ENST00000540021 PPP1R3GB7ZBB8 358 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 DPYDQ12882 1025 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 CCDC91Q7Z6B0 441 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 IFT20Q8IY31 132 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 SH2D3CQ8N5H7 860 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 CPVLQ9H3G5 476 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 EPB41L5Q9HCM4 733 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 FAM217BQ9NTX9 383 aaPredicted RBP14.41□□□□□ -0.1
MSH6-210ENST00000540021 FBXW10Q5XX13 1052 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 EHD2Q9NZN4 543 aa14.41□□□□□ -0.1
MSH6-210ENST00000540021 RICTORQ6R327 1708 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 FTCDO95954 541 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 ATP6V1AP38606 617 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 EIF4A3P38919 411 aaKnown RBP14.4□□□□□ -0.1
MSH6-210ENST00000540021 LRRC41Q15345 812 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 B4GALNT4Q76KP1 1039 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 CPLX4Q7Z7G2 160 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 TICAM2Q86XR7 235 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 NBPF3Q9H094 633 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 HYOU1Q9Y4L1 999 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 G3V3G9 751 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 EHHADHQ08426 723 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 CFAP221Q4G0U5 840 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 DCAF8Q5TAQ9 597 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 SV2BQ7L1I2 683 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 KRT12Q99456 494 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 LRRC1Q9BTT6 524 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 ISCA1Q9BUE6 129 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 XRN1Q8IZH2 1706 aaKnown RBP14.4□□□□□ -0.1
MSH6-210ENST00000540021 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.4□□□□□ -0.1
MSH6-210ENST00000540021 CEP104O60308 925 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 HNRNPLLQ8WVV9 542 aaKnown RBP14.4□□□□□ -0.1
MSH6-210ENST00000540021 HPCAL4Q9UM19 191 aa14.4□□□□□ -0.1
MSH6-210ENST00000540021 SMIM22K7EJ46 135 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 EXOC5O00471 708 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 HGSO14964 777 aaPredicted RBP14.39□□□□□ -0.11
MSH6-210ENST00000540021 CHRNDQ07001 517 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 IFT88Q13099 833 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 STAG1Q8WVM7 1258 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 DYDC1Q8WWB3 177 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 RAB34Q9BZG1 259 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 EHD4Q9H223 541 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 PSD3Q9NYI0 1048 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 FAM184BQ9ULE4 1060 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 NFU1Q9UMS0 254 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 LGALS16A8MUM7 142 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 EIF6P56537 245 aaKnown RBP14.39□□□□□ -0.11
MSH6-210ENST00000540021 CADPS2Q86UW7 1296 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 FAM208AQ9UK61 1670 aaKnown RBP14.39□□□□□ -0.11
MSH6-210ENST00000540021 HEXIM1O94992 359 aaKnown RBP14.39□□□□□ -0.11
MSH6-210ENST00000540021 MAP2K2P36507 400 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 MDM2Q00987 491 aaPredicted RBP14.39□□□□□ -0.11
MSH6-210ENST00000540021 NNTQ13423 1086 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 PPP2R5BQ15173 497 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 TRMT1LQ7Z2T5 733 aaKnown RBP14.39□□□□□ -0.11
MSH6-210ENST00000540021 MSANTD4Q8NCY6 345 aa14.39□□□□□ -0.11
MSH6-210ENST00000540021 FOXP2O15409 715 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 PRPF3O43395 683 aaKnown RBP14.38□□□□□ -0.11
MSH6-210ENST00000540021 EEF1GP26641 437 aaKnown RBP14.38□□□□□ -0.11
MSH6-210ENST00000540021 CNNM4Q6P4Q7 775 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 PNMA1Q8ND90 353 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 SELENOSQ9BQE4 189 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 PLCD4Q9BRC7 762 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 LACRTQ9GZZ8 138 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 BIN2Q9UBW5 565 aaPredicted RBP14.38□□□□□ -0.11
MSH6-210ENST00000540021 GOLGA8KD6RF30 607 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 MPHOSPH10O00566 681 aaKnown RBP14.38□□□□□ -0.11
MSH6-210ENST00000540021 MAP2K7O14733 419 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 NF2P35240 595 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 PAK2Q13177 524 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 EZH2Q15910 746 aaKnown RBP14.38□□□□□ -0.11
MSH6-210ENST00000540021 JPH2Q9BR39 696 aaPredicted RBP14.38□□□□□ -0.11
MSH6-210ENST00000540021 JCADQ9P266 1359 aa14.38□□□□□ -0.11
MSH6-210ENST00000540021 RNF225M0QZC1 329 aaPredicted RBP14.38□□□□□ -0.11
MSH6-210ENST00000540021 SEMA3EO15041 775 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms