RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 ARL8AQ96BM9 186 aa19.24■□□□□ 0.67
C2CD3-213ENST00000539061 GREM2Q9H772 168 aa19.24■□□□□ 0.67
C2CD3-213ENST00000539061 SLC4A4Q9Y6R1 1079 aa19.24■□□□□ 0.67
C2CD3-213ENST00000539061 C1orf167Q5SNV9 1468 aa19.24■□□□□ 0.67
C2CD3-213ENST00000539061 hCG_1642624A0A1W2PR95 340 aa19.24■□□□□ 0.67
C2CD3-213ENST00000539061 TACC1O75410 805 aa19.24■□□□□ 0.67
C2CD3-213ENST00000539061 CABS1Q96KC9 395 aa19.24■□□□□ 0.67
C2CD3-213ENST00000539061 TTYH3Q9C0H2 523 aa19.24■□□□□ 0.67
C2CD3-213ENST00000539061 CHD4Q14839 1912 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 NUTM2BA6NNL0 878 aaPredicted RBP19.23■□□□□ 0.67
C2CD3-213ENST00000539061 NUTM2EB1AL46 878 aaPredicted RBP19.23■□□□□ 0.67
C2CD3-213ENST00000539061 H0YHG0 523 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 USO1O60763 962 aaKnown RBP19.23■□□□□ 0.67
C2CD3-213ENST00000539061 FUT2Q10981 343 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 TTMPQ5BVD1 217 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 SPATA5Q8NB90 893 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 TRIM47Q96LD4 638 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 EXOC1Q9NV70 894 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 CYP27A1Q02318 531 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 SEC23AQ15436 765 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 SPA17Q15506 151 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
C2CD3-213ENST00000539061 TNKSO95271 1327 aa19.23■□□□□ 0.67
C2CD3-213ENST00000539061 B4DLN1 442 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 MEFVO15553 781 aaPredicted RBP19.22■□□□□ 0.67
C2CD3-213ENST00000539061 FSBPO95073 299 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 ATP6V1AP38606 617 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 MMP14P50281 582 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 PMS1P54277 932 aaKnown RBP19.22■□□□□ 0.67
C2CD3-213ENST00000539061 PDCLQ13371 301 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 TSEN2Q8NCE0 465 aaKnown RBP19.22■□□□□ 0.67
C2CD3-213ENST00000539061 NOC3LQ8WTT2 800 aaKnown RBP19.22■□□□□ 0.67
C2CD3-213ENST00000539061 CAVIN3Q969G5 261 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 CHRM1P11229 460 aaPredicted RBP19.22■□□□□ 0.67
C2CD3-213ENST00000539061 TRAPPC10P48553 1259 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 CDK17Q00537 523 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 PPARAQ07869 468 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 MICALCLQ6ZW33 695 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 STIM2Q9P246 746 aa19.22■□□□□ 0.67
C2CD3-213ENST00000539061 PSMA7O14818 248 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 FNTAP49354 379 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 SLC7A5Q01650 507 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 TBC1D8BQ0IIM8 1120 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 CCDC96Q2M329 555 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 PAXIP1Q6ZW49 1069 aaPredicted RBP19.21■□□□□ 0.67
C2CD3-213ENST00000539061 RPAINQ86UA6 219 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 SYNE4Q8N205 404 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 LCORLQ8N3X6 602 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 ESR2Q92731 530 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 CCDC42Q96M95 316 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 TUBGCP2Q9BSJ2 902 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 LRWD1Q9UFC0 647 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 SOS2Q07890 1332 aaPredicted RBP19.21■□□□□ 0.67
C2CD3-213ENST00000539061 TRPM3Q9HCF6 1732 aaPredicted RBP19.21■□□□□ 0.67
C2CD3-213ENST00000539061 PNPLA7Q6ZV29 1317 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 TCP1P17987 556 aaKnown RBP19.21■□□□□ 0.67
C2CD3-213ENST00000539061 STAT6P42226 847 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 NPY5RQ15761 445 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 IL17AQ16552 155 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 LPIN2Q92539 896 aa19.21■□□□□ 0.67
C2CD3-213ENST00000539061 RBM28Q9NW13 759 aaKnown RBP19.21■□□□□ 0.67
C2CD3-213ENST00000539061 MYH6P13533 1939 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 TNFRSF8P28908 595 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 MCM7P33993 719 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 MATR3P43243 847 aaKnown RBP eCLIP19.2■□□□□ 0.66
C2CD3-213ENST00000539061 NNTQ13423 1086 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 CCDC181Q5TID7 509 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 KIF6Q6ZMV9 814 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 A1CFQ9NQ94 594 aaKnown RBP19.2■□□□□ 0.66
C2CD3-213ENST00000539061 RASSF10A6NK89 507 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 ERVV-2B6SEH9 535 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 ZEB2O60315 1214 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 PLEKHA8P1O95397 391 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 LONP1P36776 959 aaKnown RBP19.2■□□□□ 0.66
C2CD3-213ENST00000539061 CTSWP56202 376 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 DDR1Q08345 913 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 KCNB1Q14721 858 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 PUM3Q15397 648 aaKnown RBP19.2■□□□□ 0.66
C2CD3-213ENST00000539061 CATIPQ7Z7H3 387 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 PCMTD1Q96MG8 357 aaPredicted RBP19.2■□□□□ 0.66
C2CD3-213ENST00000539061 OSBPL9Q96SU4 736 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 HYOU1Q9Y4L1 999 aa19.2■□□□□ 0.66
C2CD3-213ENST00000539061 ARL6IP4Q66PJ3 421 aaKnown RBP19.19■□□□□ 0.66
C2CD3-213ENST00000539061 ZIM3Q96PE6 472 aa19.19■□□□□ 0.66
C2CD3-213ENST00000539061 SPATA31A3Q5VYP0 1347 aa19.19■□□□□ 0.66
C2CD3-213ENST00000539061 PAFAH1B1P43034 410 aa19.19■□□□□ 0.66
C2CD3-213ENST00000539061 APBA1Q02410 837 aa19.19■□□□□ 0.66
C2CD3-213ENST00000539061 HAUS3Q68CZ6 603 aa19.19■□□□□ 0.66
C2CD3-213ENST00000539061 PIK3AP1Q6ZUJ8 805 aa19.19■□□□□ 0.66
C2CD3-213ENST00000539061 SMCR8Q8TEV9 937 aaPredicted RBP19.19■□□□□ 0.66
C2CD3-213ENST00000539061 SH2D4AQ9H788 454 aa19.19■□□□□ 0.66
C2CD3-213ENST00000539061 CAPN6Q9Y6Q1 641 aa19.19■□□□□ 0.66
C2CD3-213ENST00000539061 MYO1FO00160 1098 aa19.18■□□□□ 0.66
C2CD3-213ENST00000539061 MRPS25P82663 173 aaKnown RBP19.18■□□□□ 0.66
C2CD3-213ENST00000539061 RASGRF1Q13972 1273 aa19.18■□□□□ 0.66
C2CD3-213ENST00000539061 TTI2Q6NXR4 508 aa19.18■□□□□ 0.66
C2CD3-213ENST00000539061 YTHDF3Q7Z739 585 aaKnown RBP19.18■□□□□ 0.66
C2CD3-213ENST00000539061 PAGR1Q9BTK6 254 aa19.18■□□□□ 0.66
C2CD3-213ENST00000539061 A0A1W2PQJ5 194 aa19.18■□□□□ 0.66
C2CD3-213ENST00000539061 ZNF263O14978 683 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms