RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 PNMA1Q8ND90 353 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 HNRNPLLQ8WVV9 542 aaKnown RBP20.16■□□□□ 0.82
RAB40C-203ENST00000535977 MKNK2Q9HBH9 465 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 PCDHA4Q9UN74 947 aa20.16■□□□□ 0.82
RAB40C-203ENST00000535977 XDHP47989 1333 aa20.15■□□□□ 0.82
RAB40C-203ENST00000535977 A0A087WUV0 522 aaPredicted RBP20.15■□□□□ 0.82
RAB40C-203ENST00000535977 GTPBP6O43824 516 aaPredicted RBP20.15■□□□□ 0.82
RAB40C-203ENST00000535977 PHACTR2O75167 634 aa20.15■□□□□ 0.82
RAB40C-203ENST00000535977 EIF3JO75822 258 aaKnown RBP20.15■□□□□ 0.82
RAB40C-203ENST00000535977 CDKAL1Q5VV42 579 aa20.15■□□□□ 0.82
RAB40C-203ENST00000535977 CCDC148Q8NFR7 591 aa20.15■□□□□ 0.82
RAB40C-203ENST00000535977 KIFC2Q96AC6 838 aa20.15■□□□□ 0.82
RAB40C-203ENST00000535977 USP17L8P0C7I0 530 aa20.15■□□□□ 0.82
RAB40C-203ENST00000535977 TXNRD3Q86VQ6 643 aa20.15■□□□□ 0.82
RAB40C-203ENST00000535977 DAGLBQ8NCG7 672 aa20.15■□□□□ 0.82
RAB40C-203ENST00000535977 PPP1R3GB7ZBB8 358 aa20.14■□□□□ 0.82
RAB40C-203ENST00000535977 AKR1B15C9JRZ8 316 aaPredicted RBP20.14■□□□□ 0.82
RAB40C-203ENST00000535977 RFC4P35249 363 aa20.14■□□□□ 0.82
RAB40C-203ENST00000535977 ZNF444Q8N0Y2 327 aaPredicted RBP20.14■□□□□ 0.82
RAB40C-203ENST00000535977 ANKZF1Q9H8Y5 726 aa20.14■□□□□ 0.82
RAB40C-203ENST00000535977 PPFIA4O75335 1185 aa20.14■□□□□ 0.81
RAB40C-203ENST00000535977 SPAG1Q07617 926 aa20.14■□□□□ 0.81
RAB40C-203ENST00000535977 TRAPPC3LQ5T215 181 aa20.14■□□□□ 0.81
RAB40C-203ENST00000535977 PPFIBP1Q86W92 1011 aa20.14■□□□□ 0.81
RAB40C-203ENST00000535977 TRPC5Q9UL62 973 aaPredicted RBP20.14■□□□□ 0.81
RAB40C-203ENST00000535977 BTAF1O14981 1849 aa20.14■□□□□ 0.81
RAB40C-203ENST00000535977 WNT7AO00755 349 aa20.13■□□□□ 0.81
RAB40C-203ENST00000535977 KAT2BQ92831 832 aa20.13■□□□□ 0.81
RAB40C-203ENST00000535977 L1RE1Q9UN81 338 aa20.13■□□□□ 0.81
RAB40C-203ENST00000535977 LAD1O00515 517 aa20.13■□□□□ 0.81
RAB40C-203ENST00000535977 MCM7P33993 719 aa20.13■□□□□ 0.81
RAB40C-203ENST00000535977 PTPN21Q16825 1174 aa20.13■□□□□ 0.81
RAB40C-203ENST00000535977 DNAJC21Q5F1R6 531 aaKnown RBP20.13■□□□□ 0.81
RAB40C-203ENST00000535977 GJD4Q96KN9 370 aaPredicted RBP20.13■□□□□ 0.81
RAB40C-203ENST00000535977 PNKPQ96T60 521 aa20.13■□□□□ 0.81
RAB40C-203ENST00000535977 IL17RBQ9NRM6 502 aa20.13■□□□□ 0.81
RAB40C-203ENST00000535977 ADD3Q9UEY8 706 aaKnown RBP20.13■□□□□ 0.81
RAB40C-203ENST00000535977 NHSQ6T4R5 1651 aa20.13■□□□□ 0.81
RAB40C-203ENST00000535977 MYL1P05976 194 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 PDXDC2PQ6P474 469 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 CCDC102AQ96A19 550 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 CCDC51Q96ER9 411 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 ABCB6Q9NP58 842 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 RWDD2AQ9UIY3 292 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 KIF1CO43896 1103 aaKnown RBP20.12■□□□□ 0.81
RAB40C-203ENST00000535977 TSPY3P0CV98 308 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 TSPY8P0CW00 308 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 CD44P16070 742 aaKnown RBP20.12■□□□□ 0.81
RAB40C-203ENST00000535977 CHMP4BP1P59074 171 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 HSP90AA4PQ58FG1 418 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 ZNF772Q68DY9 489 aaPredicted RBP20.12■□□□□ 0.81
RAB40C-203ENST00000535977 APTXQ7Z2E3 356 aaKnown RBP20.12■□□□□ 0.81
RAB40C-203ENST00000535977 ITIH6Q6UXX5 1313 aa20.12■□□□□ 0.81
RAB40C-203ENST00000535977 LRRC10BA6NIK2 292 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 EVX2Q03828 476 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 SKIDA1Q1XH10 827 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 KLHL10Q6JEL2 608 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 SMIM5Q71RC9 77 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 MSL3Q8N5Y2 521 aaKnown RBP20.11■□□□□ 0.81
RAB40C-203ENST00000535977 C4orf32Q8N8J7 132 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 MED4Q9NPJ6 270 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 CCDC194A0A1B0GVG4 234 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 PLCG2P16885 1265 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 PBX1P40424 430 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 MNAT1P51948 309 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 FAM71BQ8TC56 605 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 SH3RF3Q8TEJ3 882 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-203ENST00000535977 FAM204AQ9H8W3 233 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 MAD2L2Q9UI95 211 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 ADRA2BP18089 450 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 ADKP55263 362 aaKnown RBP20.11■□□□□ 0.81
RAB40C-203ENST00000535977 HSP90B2PQ58FF3 399 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 ZNF658Q5TYW1 1059 aaPredicted RBP20.11■□□□□ 0.81
RAB40C-203ENST00000535977 RAB21Q9UL25 225 aa20.11■□□□□ 0.81
RAB40C-203ENST00000535977 M0R2N6 131 aa20.1■□□□□ 0.81
RAB40C-203ENST00000535977 FAM182BQ5T319 152 aa20.1■□□□□ 0.81
RAB40C-203ENST00000535977 SLF2Q8IX21 1173 aa20.1■□□□□ 0.81
RAB40C-203ENST00000535977 CNBD1Q8NA66 436 aa20.1■□□□□ 0.81
RAB40C-203ENST00000535977 CCDC12Q8WUD4 166 aaPredicted RBP20.1■□□□□ 0.81
RAB40C-203ENST00000535977 LIMA1Q9UHB6 759 aaKnown RBP20.1■□□□□ 0.81
RAB40C-203ENST00000535977 PUF60Q9UHX1 559 aaKnown RBP20.1■□□□□ 0.81
RAB40C-203ENST00000535977 DTHD1Q6ZMT9 781 aa20.1■□□□□ 0.81
RAB40C-203ENST00000535977 PTF1AQ7RTS3 328 aa20.1■□□□□ 0.81
RAB40C-203ENST00000535977 SRGAP1Q7Z6B7 1085 aa20.1■□□□□ 0.81
RAB40C-203ENST00000535977 CNGA4Q8IV77 575 aa20.1■□□□□ 0.81
RAB40C-203ENST00000535977 IGSF22Q8N9C0 903 aa20.1■□□□□ 0.81
RAB40C-203ENST00000535977 ERLIN1O75477 346 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 ERLIN2O94905 339 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 ATP2B4P23634 1241 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 SMARCA1P28370 1054 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 PRPHP41219 470 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 RRAGBQ5VZM2 374 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 TOGARAM2Q6ZUX3 1019 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 FAM212AQ96EL1 285 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 BARHL2Q9NY43 387 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 PALM3A6NDB9 673 aaPredicted RBP20.09■□□□□ 0.81
RAB40C-203ENST00000535977 PAK1Q13153 545 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 TRIM14Q14142 442 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 CASP8Q14790 479 aa20.09■□□□□ 0.81
RAB40C-203ENST00000535977 IL17AQ16552 155 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms