RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 ZFYP08048 801 aaPredicted RBP25.43■■□□□ 1.66
SSH3-211ENST00000534112 OAZ1P54368 228 aa25.43■■□□□ 1.66
SSH3-211ENST00000534112 GRIN2CQ14957 1233 aa25.43■■□□□ 1.66
SSH3-211ENST00000534112 TSHZ3Q63HK5 1081 aa25.43■■□□□ 1.66
SSH3-211ENST00000534112 VTI1AQ96AJ9 217 aa25.43■■□□□ 1.66
SSH3-211ENST00000534112 GPATCH3Q96I76 525 aa25.43■■□□□ 1.66
SSH3-211ENST00000534112 MROH7Q68CQ1 1323 aa25.42■■□□□ 1.66
SSH3-211ENST00000534112 DNAJB2P25686 324 aa25.42■■□□□ 1.66
SSH3-211ENST00000534112 GJA9P57773 515 aa25.42■■□□□ 1.66
SSH3-211ENST00000534112 MFSD5Q6N075 450 aa25.42■■□□□ 1.66
SSH3-211ENST00000534112 ARMCX2Q7L311 632 aa25.42■■□□□ 1.66
SSH3-211ENST00000534112 LRRC47Q8N1G4 583 aaKnown RBP25.42■■□□□ 1.66
SSH3-211ENST00000534112 GMCL1P1Q8NEA9 526 aa25.42■■□□□ 1.66
SSH3-211ENST00000534112 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.42■■□□□ 1.66
SSH3-211ENST00000534112 UPF3AQ9H1J1 476 aaKnown RBP25.42■■□□□ 1.66
SSH3-211ENST00000534112 MYH7P12883 1935 aa25.41■■□□□ 1.66
SSH3-211ENST00000534112 TTC28Q96AY4 2481 aa25.41■■□□□ 1.66
SSH3-211ENST00000534112 PATL2C9JE40 543 aaKnown RBP25.41■■□□□ 1.66
SSH3-211ENST00000534112 M0R2C6 588 aa25.41■■□□□ 1.66
SSH3-211ENST00000534112 GNASQ5JWF2 1037 aa25.41■■□□□ 1.66
SSH3-211ENST00000534112 SLFN13Q68D06 897 aa25.41■■□□□ 1.66
SSH3-211ENST00000534112 ARVCFO00192 962 aa25.4■■□□□ 1.66
SSH3-211ENST00000534112 BMP3P12645 472 aa25.4■■□□□ 1.66
SSH3-211ENST00000534112 C16orf59Q7L2K0 433 aa25.4■■□□□ 1.66
SSH3-211ENST00000534112 CCDC144CPQ8IYA2 1237 aa25.4■■□□□ 1.66
SSH3-211ENST00000534112 IFNL3Q8IZI9 196 aa25.4■■□□□ 1.66
SSH3-211ENST00000534112 DCTPP1Q9H773 170 aa25.4■■□□□ 1.66
SSH3-211ENST00000534112 HOMER2Q9NSB8 354 aa25.4■■□□□ 1.66
SSH3-211ENST00000534112 A0A0U1RQG5 324 aaPredicted RBP25.39■■□□□ 1.66
SSH3-211ENST00000534112 CNTN2Q02246 1040 aa25.39■■□□□ 1.66
SSH3-211ENST00000534112 PPIGQ13427 754 aaKnown RBP eCLIP25.39■■□□□ 1.66
SSH3-211ENST00000534112 NEDD1Q8NHV4 660 aa25.39■■□□□ 1.66
SSH3-211ENST00000534112 TIFAQ96CG3 184 aa25.39■■□□□ 1.66
SSH3-211ENST00000534112 KATNBL1Q9H079 304 aa25.39■■□□□ 1.66
SSH3-211ENST00000534112 ZNF576Q9H609 170 aa25.39■■□□□ 1.66
SSH3-211ENST00000534112 TMEM232C9JQI7 657 aa25.38■■□□□ 1.65
SSH3-211ENST00000534112 CTAGE5O15320 804 aa25.38■■□□□ 1.65
SSH3-211ENST00000534112 FDX1P10109 184 aa25.38■■□□□ 1.65
SSH3-211ENST00000534112 TMEM240Q5SV17 173 aa25.38■■□□□ 1.65
SSH3-211ENST00000534112 CCDC174Q6PII3 467 aa25.38■■□□□ 1.65
SSH3-211ENST00000534112 TSPY3P0CV98 308 aa25.37■■□□□ 1.65
SSH3-211ENST00000534112 TSPY8P0CW00 308 aa25.37■■□□□ 1.65
SSH3-211ENST00000534112 CSF2RAP15509 400 aa25.37■■□□□ 1.65
SSH3-211ENST00000534112 NKX3-2P78367 333 aa25.37■■□□□ 1.65
SSH3-211ENST00000534112 FAM126BQ8IXS8 530 aa25.37■■□□□ 1.65
SSH3-211ENST00000534112 FAM133AQ8N9E0 248 aa25.37■■□□□ 1.65
SSH3-211ENST00000534112 NACAP1Q9BZK3 213 aa25.37■■□□□ 1.65
SSH3-211ENST00000534112 ACAD9Q9H845 621 aa25.37■■□□□ 1.65
SSH3-211ENST00000534112 PLIN4Q96Q06 1357 aa25.36■■□□□ 1.65
SSH3-211ENST00000534112 STAT2P52630 851 aa25.36■■□□□ 1.65
SSH3-211ENST00000534112 TFAP4Q01664 338 aa25.36■■□□□ 1.65
SSH3-211ENST00000534112 PDE4BQ07343 736 aa25.36■■□□□ 1.65
SSH3-211ENST00000534112 LRRFIP1Q32MZ4 808 aaKnown RBP25.36■■□□□ 1.65
SSH3-211ENST00000534112 RASIP1Q5U651 963 aa25.36■■□□□ 1.65
SSH3-211ENST00000534112 TMEM199Q8N511 208 aa25.36■■□□□ 1.65
SSH3-211ENST00000534112 CHURC1Q8WUH1 139 aa25.36■■□□□ 1.65
SSH3-211ENST00000534112 ISY1Q9ULR0 285 aaKnown RBP25.36■■□□□ 1.65
SSH3-211ENST00000534112 BEX3Q00994 111 aa25.35■■□□□ 1.65
SSH3-211ENST00000534112 TNFAIP2Q03169 654 aa25.35■■□□□ 1.65
SSH3-211ENST00000534112 USP38Q8NB14 1042 aa25.35■■□□□ 1.65
SSH3-211ENST00000534112 STAG1Q8WVM7 1258 aa25.35■■□□□ 1.65
SSH3-211ENST00000534112 SYMPKQ92797 1274 aaKnown RBP25.35■■□□□ 1.65
SSH3-211ENST00000534112 AGBL1Q96MI9 1066 aa25.35■■□□□ 1.65
SSH3-211ENST00000534112 SEC62Q99442 399 aaKnown RBP25.35■■□□□ 1.65
SSH3-211ENST00000534112 PPP1R12CQ9BZL4 782 aa25.35■■□□□ 1.65
SSH3-211ENST00000534112 A1CFQ9NQ94 594 aaKnown RBP25.35■■□□□ 1.65
SSH3-211ENST00000534112 ZNF536O15090 1300 aa25.35■■□□□ 1.65
SSH3-211ENST00000534112 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.34■■□□□ 1.65
SSH3-211ENST00000534112 SOWAHBA6NEL2 793 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 GRXCR1A8MXD5 290 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 TLR3O15455 904 aaKnown RBP25.34■■□□□ 1.65
SSH3-211ENST00000534112 SLC3A2P08195 630 aaKnown RBP25.34■■□□□ 1.65
SSH3-211ENST00000534112 ACRP10323 421 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 PBX2P40425 430 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 SLC1A4P43007 532 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 ZNF365Q70YC5 407 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 NOL8Q76FK4 1167 aaKnown RBP25.34■■□□□ 1.65
SSH3-211ENST00000534112 FAM160B2Q86V87 743 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 GMCL1Q96IK5 515 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 PBX4Q9BYU1 374 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 RNF146Q9NTX7 359 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 ASTN1O14525 1302 aa25.34■■□□□ 1.65
SSH3-211ENST00000534112 ASB14A6NK59 587 aa25.33■■□□□ 1.65
SSH3-211ENST00000534112 CD4P01730 458 aa25.33■■□□□ 1.65
SSH3-211ENST00000534112 MCCP23508 829 aa25.33■■□□□ 1.65
SSH3-211ENST00000534112 PPARAQ07869 468 aa25.33■■□□□ 1.65
SSH3-211ENST00000534112 IKQ13123 557 aaPredicted RBP25.33■■□□□ 1.65
SSH3-211ENST00000534112 CCDC129Q6ZRS4 1044 aa25.33■■□□□ 1.65
SSH3-211ENST00000534112 CHMP4CQ96CF2 233 aa25.33■■□□□ 1.65
SSH3-211ENST00000534112 NAPBQ9H115 298 aa25.33■■□□□ 1.65
SSH3-211ENST00000534112 GNEQ9Y223 722 aaKnown RBP25.33■■□□□ 1.65
SSH3-211ENST00000534112 CYP2C18P33260 490 aa25.32■■□□□ 1.64
SSH3-211ENST00000534112 TKFCQ3LXA3 575 aa25.32■■□□□ 1.64
SSH3-211ENST00000534112 PSRC1Q6PGN9 363 aaPredicted RBP25.32■■□□□ 1.64
SSH3-211ENST00000534112 CXCL17Q6UXB2 119 aa25.32■■□□□ 1.64
SSH3-211ENST00000534112 SLC43A3Q8NBI5 491 aa25.32■■□□□ 1.64
SSH3-211ENST00000534112 TRERF1Q96PN7 1200 aa25.32■■□□□ 1.64
SSH3-211ENST00000534112 PLA2G6O60733 806 aa25.31■■□□□ 1.64
SSH3-211ENST00000534112 TTC41PQ6P2S7 1318 aa25.31■■□□□ 1.64
SSH3-211ENST00000534112 MUC3AQ02505 3323 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms