RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 CPXCR1Q8N123 301 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 STAG2Q8N3U4 1231 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 RRP36Q96EU6 259 aaKnown RBP13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 SPZ1Q9BXG8 430 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 UBA5Q9GZZ9 404 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 TXNRD2Q9NNW7 524 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 FBXO40Q9UH90 709 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 ZNF214Q9UL59 606 aaPredicted RBP13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 CCPG1Q9ULG6 757 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 CPLX1O14810 134 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 CNMDO75829 334 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 ICAM1P05362 532 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 PSMC4P43686 418 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 SLC4A3P48751 1232 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 CDC37Q16543 378 aaPredicted RBP13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 CCDC174Q6PII3 467 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 TMTC3Q6ZXV5 915 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 NCAPG2Q86XI2 1143 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 RAB11FIP4Q86YS3 637 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 REPS2Q8NFH8 660 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 CD99L2Q8TCZ2 262 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 MOV10L1Q9BXT6 1211 aaKnown RBP13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 SLKQ9H2G2 1235 aaPredicted RBP13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 EFCC1Q9HA90 598 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 RAVER2Q9HCJ3 691 aaKnown RBP13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 VAT1LQ9HCJ6 419 aa13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 RBM27Q9P2N5 1060 aaKnown RBP13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 COL11A1P12107 1806 aaPredicted RBP13.73□□□□□ -0.21
PPFIA1-220ENST00000532024 ZBTB5O15062 677 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 STRNO43815 780 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 CDKL5O76039 1030 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 PDIA3P30101 505 aaKnown RBP13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 MCM2P49736 904 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 PRMT2P55345 433 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 AKAP17AQ02040 695 aaKnown RBP13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 PLEKHH3Q7Z736 793 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 FBXO11Q86XK2 927 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 HOMER1Q86YM7 354 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 CHST13Q8NET6 341 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 SOCS4Q8WXH5 440 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 RIOX1Q9H6W3 641 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 JMJD4Q9H9V9 463 aa13.72□□□□□ -0.21
PPFIA1-220ENST00000532024 PNMA6FA0A0J9YX94 578 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 PLEKHA8P1O95397 391 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 FCER1AP12319 257 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 ALAS1P13196 640 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 ERCC3P19447 782 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 KCTD2Q14681 263 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 NOL8Q76FK4 1167 aaKnown RBP13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 CTU1Q7Z7A3 348 aaKnown RBP13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 TRIM22Q8IYM9 498 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 TRIM47Q96LD4 638 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 ZSCAN31Q96LW9 406 aaPredicted RBP13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 KIF2CQ99661 725 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 AMNQ9BXJ7 453 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 PORCNQ9H237 461 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 CPVLQ9H3G5 476 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 ACAD9Q9H845 621 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 SLC5A4Q9NY91 659 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 LIMCH1Q9UPQ0 1083 aa13.71□□□□□ -0.21
PPFIA1-220ENST00000532024 ABCB11O95342 1321 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 SNAP25P60880 206 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 STK3Q13188 491 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 QRICH1Q2TAL8 776 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 Q3C1V9 767 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 POTEEQ6S8J3 1075 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 GPR142Q7Z601 462 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 ABRAQ8N0Z2 381 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 AGBL1Q96MI9 1066 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 TRERF1Q96PN7 1200 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 PIGSQ96S52 555 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 NUDT12Q9BQG2 462 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 HOMER2Q9NSB8 354 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 RNF146Q9NTX7 359 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 TPCN1Q9ULQ1 816 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 HPS5Q9UPZ3 1129 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 TRIM17Q9Y577 477 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 MGAMO43451 1857 aa13.7□□□□□ -0.22
PPFIA1-220ENST00000532024 PFASO15067 1338 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 ZNF536O15090 1300 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 SLC15A5A6NIM6 579 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 hCG_1984214I3L0E3 225 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 PEX10O60683 326 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 PFKFB2O60825 505 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 ECM2O94769 699 aaPredicted RBP13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 CCT2P78371 535 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 PKN2Q16513 984 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 USH1GQ495M9 461 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 ANKRD35Q8N283 1001 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 CCDC82Q8N4S0 544 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 SRBD1Q8N5C6 995 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 ZNF713Q8N859 430 aaPredicted RBP13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 MTMR8Q96EF0 704 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 MMP19Q99542 508 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 LARP6Q9BRS8 491 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 MAF1Q9H063 256 aa13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 SH2B1Q9NRF2 756 aaPredicted RBP13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 MRPL11Q9Y3B7 192 aaKnown RBP13.69□□□□□ -0.22
PPFIA1-220ENST00000532024 ZNF236Q9UL36 1845 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 1035 ms