RNA–Protein interactions for RNA: ENST00000527845.1

CKLF-CMTM1-202, Transcript of CKLF-CMTM1 readthrough, humanhuman

TSL 3

Gene CKLF-CMTM1, Length 504 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-CMTM1-202ENST00000527845 TSPY2A6NKD2 308 aa20.74■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 PQBP1O60828 265 aaKnown RBP20.74■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 RAG1P15918 1043 aa20.74■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 SLC1A4P43007 532 aa20.74■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 IKQ13123 557 aaPredicted RBP20.74■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 SH3RF1Q7Z6J0 888 aa20.74■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 STAG1Q8WVM7 1258 aa20.74■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 GLT1D1Q96MS3 346 aa20.74■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 ELP1O95163 1332 aa20.74■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 MCM3APO60318 1980 aa20.74■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 C9orf50Q5SZB4 431 aa20.73■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 ARMCX2Q7L311 632 aa20.73■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 LENG1Q96BZ8 264 aaPredicted RBP20.73■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 EVI5LQ96CN4 794 aa20.73■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 UPF3AQ9H1J1 476 aaKnown RBP20.73■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 TMEM39AQ9NV64 488 aa20.73■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.73■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 SALL3Q9BXA9 1300 aa20.73■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 TMEM265A0A087WTH1 108 aa20.72■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 KCNA10Q16322 511 aa20.72■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 CCSAPQ6IQ19 270 aaPredicted RBP20.72■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 OTUD7AQ8TE49 926 aaPredicted RBP20.72■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 GUCD1Q96NT3 240 aa20.72■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 ANAPC4Q9UJX5 808 aa20.72■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 STX8Q9UNK0 236 aa20.72■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 ASB14A6NK59 587 aa20.71■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 C6orf222P0C671 652 aaPredicted RBP20.71■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 RRP1P56182 461 aaKnown RBP20.71■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 GJA9P57773 515 aa20.71■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 FPGSQ05932 587 aa20.71■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 CCDC144BQ3MJ40 725 aa20.71■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 RNPC3Q96LT9 517 aaKnown RBP20.71■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 HELLSQ9NRZ9 838 aa20.71■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 HOMER2Q9NSB8 354 aa20.71■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 RNF146Q9NTX7 359 aa20.71■□□□□ 0.91
CKLF-CMTM1-202ENST00000527845 FAAP100Q0VG06 881 aa20.7■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 RCSD1Q6JBY9 416 aa20.7■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 CCDC174Q6PII3 467 aa20.7■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 CCDC144CPQ8IYA2 1237 aa20.7■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 FAM133AQ8N9E0 248 aa20.7■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 FGD4Q96M96 766 aa20.7■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 LRRC37A2A6NM11 1700 aa20.7■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 A0A0U1RQG5 324 aaPredicted RBP20.69■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ORC4O43929 436 aa20.69■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ASGR1P07306 291 aa20.69■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 MCCP23508 829 aa20.69■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 NKX3-2P78367 333 aa20.69■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ALX1Q15699 326 aa20.69■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ANKRD45Q5TZF3 282 aa20.69■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 A1CFQ9NQ94 594 aaKnown RBP20.69■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ZNF536O15090 1300 aa20.69■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 TLR3O15455 904 aaKnown RBP20.68■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 RANBP6O60518 1105 aaKnown RBP20.68■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ITGB8P26012 769 aa20.68■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 CTDSPL2Q05D32 466 aa20.68■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 CCDC129Q6ZRS4 1044 aa20.68■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 DCAF4Q8WV16 495 aa20.68■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 FAM161BQ96MY7 647 aa20.68■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 TRERF1Q96PN7 1200 aa20.68■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 SEZ6LQ9BYH1 1024 aa20.68■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ZMYM6O95789 1325 aa20.68■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 MYADML2A6NDP7 307 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 FOXP2O15409 715 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 TIMP1P01033 207 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ALAS1P13196 640 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 NOVP48745 357 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 HDAC1Q13547 482 aaPredicted RBP20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 AAMPQ13685 434 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 GNASQ5JWF2 1037 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 KCTD1Q719H9 257 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 VTI1AQ96AJ9 217 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 AGBL1Q96MI9 1066 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 KATNBL1Q9H079 304 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 SEMA6BQ9H3T3 888 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 IL17RBQ9NRM6 502 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 TBX21Q9UL17 535 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 PNMA2Q9UL42 364 aa20.67■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ARVCFO00192 962 aa20.66■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ADCY6O43306 1168 aa20.66■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 CABYRO75952 493 aa20.66■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 FGRP09769 529 aa20.66■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 CDK7P50613 346 aa20.66■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 PDE1AP54750 535 aa20.66■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 CNTN2Q02246 1040 aa20.66■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 TNFAIP2Q03169 654 aa20.66■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 PPIGQ13427 754 aaKnown RBP eCLIP20.66■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 PRR12Q9ULL5 1215 aa20.66■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 LOC102724159A0A0B4J2E5 919 aa20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ZEB2O60315 1214 aa20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 ICAM1P05362 532 aa20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 PCP11498 1178 aaKnown RBP20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 PWP2Q15269 919 aaKnown RBP20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 CCDC96Q2M329 555 aa20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 MCMDC2Q4G0Z9 681 aa20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 MFSD5Q6N075 450 aa20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 CDX2Q99626 313 aaPredicted RBP20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 TOMM22Q9NS69 142 aa20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 CCPG1Q9ULG6 757 aa20.65■□□□□ 0.9
CKLF-CMTM1-202ENST00000527845 Q9Y3F1 56 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms