RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 C22orf23Q9BZE7 217 aa13.88□□□□□ -0.19
RPUSD4-203ENST00000526942 PPP1R12CQ9BZL4 782 aa13.88□□□□□ -0.19
RPUSD4-203ENST00000526942 BAZ2AQ9UIF9 1905 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 ARVCFO00192 962 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 RAD21O60216 631 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 ACVR2BQ13705 512 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 RAB30Q15771 203 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 CCDC85BQ15834 202 aaPredicted RBP13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 SLFNL1Q499Z3 407 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 BMP2KLQ5H9B9 411 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 L1TD1Q5T7N2 865 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 SNRNP48Q6IEG0 339 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 FAM126BQ8IXS8 530 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 AMOTL1Q8IY63 956 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 RHPN1Q8TCX5 695 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 DDX11Q96FC9 970 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 UPF3AQ9H1J1 476 aaKnown RBP13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 MSRAQ9UJ68 235 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 RIPK3Q9Y572 518 aa13.87□□□□□ -0.19
RPUSD4-203ENST00000526942 USP17L12C9JPN9 530 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 USP17L21D6R901 530 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 APBB1O00213 710 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 IGFBP4P22692 258 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 ADD2P35612 726 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 GJA9P57773 515 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 ZNF467Q7Z7K2 595 aaPredicted RBP13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 VTI1AQ96AJ9 217 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 SLF1Q9BQI6 1058 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 SPC25Q9HBM1 224 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 PLA2G5P39877 138 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 HSP90AB4PQ58FF6 505 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 HERVK_113Q902F9 699 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 NUP88Q99567 741 aaPredicted RBP13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 NKX2-4Q9H2Z4 354 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 IL23AQ9NPF7 189 aa13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 CXXC1Q9P0U4 656 aaPredicted RBP13.86□□□□□ -0.19
RPUSD4-203ENST00000526942 CYP2C18P33260 490 aa13.85□□□□□ -0.19
RPUSD4-203ENST00000526942 CCDC144BQ3MJ40 725 aa13.85□□□□□ -0.19
RPUSD4-203ENST00000526942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
RPUSD4-203ENST00000526942 FGD4Q96M96 766 aa13.85□□□□□ -0.19
RPUSD4-203ENST00000526942 LNPKQ9C0E8 428 aa13.85□□□□□ -0.19
RPUSD4-203ENST00000526942 ABHD16BQ9H3Z7 469 aa13.85□□□□□ -0.19
RPUSD4-203ENST00000526942 YBX2Q9Y2T7 364 aaKnown RBP13.85□□□□□ -0.19
RPUSD4-203ENST00000526942 GREB1LQ9C091 1923 aaPredicted RBP13.84□□□□□ -0.19
RPUSD4-203ENST00000526942 XIRP2A4UGR9 3374 aa13.84□□□□□ -0.19
RPUSD4-203ENST00000526942 ATP2A1O14983 1001 aa13.84□□□□□ -0.19
RPUSD4-203ENST00000526942 CD4P01730 458 aa13.84□□□□□ -0.19
RPUSD4-203ENST00000526942 GNASQ5JWF2 1037 aa13.84□□□□□ -0.19
RPUSD4-203ENST00000526942 CLASRPQ8N2M8 674 aaKnown RBP13.84□□□□□ -0.19
RPUSD4-203ENST00000526942 MTIF3Q9H2K0 278 aaKnown RBP13.84□□□□□ -0.19
RPUSD4-203ENST00000526942 SLC28A3Q9HAS3 691 aa13.84□□□□□ -0.19
RPUSD4-203ENST00000526942 PAG1Q9NWQ8 432 aa13.84□□□□□ -0.19
RPUSD4-203ENST00000526942 CTAGE5O15320 804 aa13.83□□□□□ -0.19
RPUSD4-203ENST00000526942 IFIT2P09913 472 aaKnown RBP13.83□□□□□ -0.19
RPUSD4-203ENST00000526942 RBM25P49756 843 aaKnown RBP13.83□□□□□ -0.19
RPUSD4-203ENST00000526942 MFAP1P55081 439 aaKnown RBP13.83□□□□□ -0.19
RPUSD4-203ENST00000526942 CTR9Q6PD62 1173 aa13.83□□□□□ -0.19
RPUSD4-203ENST00000526942 ARMCX2Q7L311 632 aa13.83□□□□□ -0.19
RPUSD4-203ENST00000526942 SIRT2Q8IXJ6 389 aa13.83□□□□□ -0.19
RPUSD4-203ENST00000526942 FAM122AQ96E09 287 aa13.83□□□□□ -0.19
RPUSD4-203ENST00000526942 BDP1A6H8Y1 2624 aa13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 NDUFB10O96000 172 aa13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 FGBP02675 491 aa13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 CHGBP05060 677 aa13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 CPXCR1Q8N123 301 aa13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 PRPF38AQ8NAV1 312 aaKnown RBP13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 KIF1BPQ96EK5 621 aa13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 KATNBL1Q9H079 304 aa13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 SLC4A4Q9Y6R1 1079 aa13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 REV3LO60673 3130 aa13.83□□□□□ -0.2
RPUSD4-203ENST00000526942 UMODL1Q5DID0 1318 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 GBF1Q92538 1859 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 F5H6K3 240 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 ZBED4O75132 1171 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 NKX3-2P78367 333 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 KLRC3Q07444 240 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 ANKRD45Q5TZF3 282 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 ANKRD35Q8N283 1001 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 SLC43A3Q8NBI5 491 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 NECAB3Q96P71 396 aaPredicted RBP13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 BOLA2Q9H3K6 86 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 HIPK3Q9H422 1215 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 RAVER2Q9HCJ3 691 aaKnown RBP13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 NYAP2Q9P242 653 aa13.82□□□□□ -0.2
RPUSD4-203ENST00000526942 RASA1P20936 1047 aa13.81□□□□□ -0.2
RPUSD4-203ENST00000526942 BEX3Q00994 111 aa13.81□□□□□ -0.2
RPUSD4-203ENST00000526942 UBE3CQ15386 1083 aa13.81□□□□□ -0.2
RPUSD4-203ENST00000526942 OTOP2Q7RTS6 562 aa13.81□□□□□ -0.2
RPUSD4-203ENST00000526942 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
RPUSD4-203ENST00000526942 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
RPUSD4-203ENST00000526942 SLC38A10Q9HBR0 1119 aa13.81□□□□□ -0.2
RPUSD4-203ENST00000526942 ARPP21Q9UBL0 812 aaPredicted RBP13.81□□□□□ -0.2
RPUSD4-203ENST00000526942 FBXO40Q9UH90 709 aa13.81□□□□□ -0.2
RPUSD4-203ENST00000526942 CTDP1Q9Y5B0 961 aaPredicted RBP13.81□□□□□ -0.2
RPUSD4-203ENST00000526942 ASTN1O14525 1302 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 232.3 ms