RNA–Protein interactions for RNA: ENST00000520462.5

TSNARE1-206, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-206ENST00000520462 NECTIN1Q15223 517 aa18.08■□□□□ 0.48
TSNARE1-206ENST00000520462 SNRNP48Q6IEG0 339 aaKnown RBP18.08■□□□□ 0.48
TSNARE1-206ENST00000520462 STOX1Q6ZVD7 989 aa18.08■□□□□ 0.48
TSNARE1-206ENST00000520462 RASGRP2Q7LDG7 609 aa18.08■□□□□ 0.48
TSNARE1-206ENST00000520462 REPS2Q8NFH8 660 aa18.08■□□□□ 0.48
TSNARE1-206ENST00000520462 ANKS1AQ92625 1134 aa18.08■□□□□ 0.48
TSNARE1-206ENST00000520462 SLC38A10Q9HBR0 1119 aa18.08■□□□□ 0.48
TSNARE1-206ENST00000520462 SLC5A4Q9NY91 659 aa18.08■□□□□ 0.48
TSNARE1-206ENST00000520462 ZNF214Q9UL59 606 aaPredicted RBP18.08■□□□□ 0.48
TSNARE1-206ENST00000520462 TAF6LQ9Y6J9 622 aa18.08■□□□□ 0.48
TSNARE1-206ENST00000520462 SOX1O00570 391 aaPredicted RBP18.07■□□□□ 0.48
TSNARE1-206ENST00000520462 REC8O95072 547 aa18.07■□□□□ 0.48
TSNARE1-206ENST00000520462 FCER1AP12319 257 aa18.07■□□□□ 0.48
TSNARE1-206ENST00000520462 GPATCH4Q5T3I0 446 aaKnown RBP18.07■□□□□ 0.48
TSNARE1-206ENST00000520462 DPP9Q86TI2 863 aa18.07■□□□□ 0.48
TSNARE1-206ENST00000520462 RAVER2Q9HCJ3 691 aaKnown RBP18.07■□□□□ 0.48
TSNARE1-206ENST00000520462 PRR12Q9ULL5 1215 aa18.07■□□□□ 0.48
TSNARE1-206ENST00000520462 ATP2A1O14983 1001 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 OAZ1P54368 228 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 ZNF543Q08ER8 600 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 GRB14Q14449 540 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 KCTD2Q14681 263 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 WTAPQ15007 396 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 TMEM67Q5HYA8 995 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 SYDE2Q5VT97 1194 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 MFSD14CQ5VZR4 134 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 TTBK2Q6IQ55 1244 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 LRCH3Q96II8 777 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 MMP19Q99542 508 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 ZNF236Q9UL36 1845 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 MYH6P13533 1939 aa18.06■□□□□ 0.48
TSNARE1-206ENST00000520462 SNHG28P0DPA3 235 aa18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 ADORA2AP29274 412 aa18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 MCM5P33992 734 aa18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 SLC16A2P36021 539 aa18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 SEC23AQ15436 765 aa18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 CCDC174Q6PII3 467 aa18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 CHST3Q7LGC8 479 aa18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 MB21D2Q8IYB1 491 aaPredicted RBP18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 ABRAQ8N0Z2 381 aa18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 GDF15Q99988 308 aa18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 PLXNA1Q9UIW2 1896 aa18.05■□□□□ 0.48
TSNARE1-206ENST00000520462 PFASO15067 1338 aa18.04■□□□□ 0.48
TSNARE1-206ENST00000520462 PRC1O43663 620 aa18.04■□□□□ 0.48
TSNARE1-206ENST00000520462 PARP1P09874 1014 aaKnown RBP18.04■□□□□ 0.48
TSNARE1-206ENST00000520462 CNGA1P29973 690 aa18.04■□□□□ 0.48
TSNARE1-206ENST00000520462 KRT32Q14532 448 aa18.04■□□□□ 0.48
TSNARE1-206ENST00000520462 ASPRV1Q53RT3 343 aa18.04■□□□□ 0.48
TSNARE1-206ENST00000520462 LHX8Q68G74 356 aa18.04■□□□□ 0.48
TSNARE1-206ENST00000520462 BTNL9Q6UXG8 535 aa18.04■□□□□ 0.48
TSNARE1-206ENST00000520462 FLRT1Q9NZU1 646 aa18.04■□□□□ 0.48
TSNARE1-206ENST00000520462 FBXO40Q9UH90 709 aa18.04■□□□□ 0.48
TSNARE1-206ENST00000520462 GOLGA8HP0CJ92 632 aa18.03■□□□□ 0.48
TSNARE1-206ENST00000520462 BMP8BP34820 402 aa18.03■□□□□ 0.48
TSNARE1-206ENST00000520462 MAGEA10P43363 369 aaPredicted RBP18.03■□□□□ 0.48
TSNARE1-206ENST00000520462 CHST13Q8NET6 341 aa18.03■□□□□ 0.48
TSNARE1-206ENST00000520462 DDX11Q96FC9 970 aa18.03■□□□□ 0.48
TSNARE1-206ENST00000520462 MTA3Q9BTC8 594 aa18.03■□□□□ 0.48
TSNARE1-206ENST00000520462 DHX16O60231 1041 aaKnown RBP18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 HOXC6P09630 235 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 ALAS1P13196 640 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 ANTXR2P58335 489 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 SNAP25P60880 206 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 TKFCQ3LXA3 575 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 NFXL1Q6ZNB6 911 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 CATIPQ7Z7H3 387 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 TMEM87BQ96K49 555 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 NEK1Q96PY6 1258 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 RANBP17Q9H2T7 1088 aaKnown RBP18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 HOMER2Q9NSB8 354 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 PNMA2Q9UL42 364 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 CCPG1Q9ULG6 757 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 LAMA3Q16787 3333 aa18.02■□□□□ 0.48
TSNARE1-206ENST00000520462 COL6A1P12109 1028 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 CYP2C19P33261 490 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 LRRC26Q2I0M4 334 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 ANKRD35Q8N283 1001 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 TMTC2Q8N394 836 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 NPLOC4Q8TAT6 608 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 AGBL1Q96MI9 1066 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 UBE2OQ9C0C9 1292 aaKnown RBP18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 UBA5Q9GZZ9 404 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 ACAD9Q9H845 621 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 RNF146Q9NTX7 359 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 RIPK3Q9Y572 518 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 SMCHD1A6NHR9 2005 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 CUL9Q8IWT3 2517 aa18.01■□□□□ 0.47
TSNARE1-206ENST00000520462 CCDC69A6NI79 296 aa18■□□□□ 0.47
TSNARE1-206ENST00000520462 ICAM1P05362 532 aa18■□□□□ 0.47
TSNARE1-206ENST00000520462 TSGA10IPQ3SY00 556 aa18■□□□□ 0.47
TSNARE1-206ENST00000520462 IGDCC4Q8TDY8 1250 aa18■□□□□ 0.47
TSNARE1-206ENST00000520462 TRERF1Q96PN7 1200 aa18■□□□□ 0.47
TSNARE1-206ENST00000520462 SENP6Q9GZR1 1112 aaPredicted RBP18■□□□□ 0.47
TSNARE1-206ENST00000520462 DDX20Q9UHI6 824 aaKnown RBP18■□□□□ 0.47
TSNARE1-206ENST00000520462 ZNF536O15090 1300 aa17.99■□□□□ 0.47
TSNARE1-206ENST00000520462 EPB41L2O43491 1005 aaKnown RBP17.99■□□□□ 0.47
TSNARE1-206ENST00000520462 COBLO75128 1261 aa17.99■□□□□ 0.47
TSNARE1-206ENST00000520462 PGK2P07205 417 aa17.99■□□□□ 0.47
TSNARE1-206ENST00000520462 HMGB1P09429 215 aaKnown RBP17.99■□□□□ 0.47
TSNARE1-206ENST00000520462 HSPA4P34932 840 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms