RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 USP54Q70EL1 1684 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 FER1L4A9Z1Z3 1794 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 MYH13Q9UKX3 1938 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 MYH1P12882 1939 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MYH4Q9Y623 1939 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 NUP98P52948 1817 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ARFGEF2Q9Y6D5 1785 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 KIF1AQ12756 1690 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SLIT3O75094 1523 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF609O15014 1411 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 NPHP4O75161 1426 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CPDO75976 1380 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 JCADQ9P266 1359 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SALL1Q9NSC2 1324 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 A0A1W2PQJ5 194 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 GRID2IPA4D2P6 1211 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 A6NJR5 290 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 USP27XA6NNY8 438 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC188H7C350 402 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PSMD14O00487 310 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MAP2K7O14733 419 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 NDC80O14777 642 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CETN3O15182 167 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 GNPATO15228 680 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MAP3K13O43283 966 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CALUO43852 315 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MFAP3LO75121 409 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 TADA3O75528 432 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 RPS6KA5O75582 802 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZRANB2O95218 330 aaKnown RBP eCLIP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MBD4O95243 580 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SERPING1P05155 500 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PARP1P09874 1014 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 POTEJP0CG39 1038 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SCG2P13521 617 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 EZRP15311 586 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCNE1P24864 410 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ATP5DP30049 168 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 HIBADHP31937 336 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 GBP1P32455 592 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MCM7P33993 719 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ATP6V1AP38606 617 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 NOP2P46087 812 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 USP14P54578 494 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 EPHB4P54760 987 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 EIF3BP55884 814 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 STX17P56962 302 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ATP2C1P98194 919 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 FKBP3Q00688 224 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MAP2K1Q02750 393 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 LRRC63Q05C16 580 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CTDSPL2Q05D32 466 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 IFFO1Q0D2I5 559 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PAK2Q13177 524 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 NNTQ13423 1086 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 DRP2Q13474 957 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MTMR3Q13615 1198 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CASP8Q14790 479 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ARID5BQ14865 1188 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 NCAPHQ15003 741 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 TNIP1Q15025 636 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 NONOQ15233 471 aaKnown RBP eCLIP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PTPAQ15257 358 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 AMHR2Q16671 573 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PFKFB3Q16875 520 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SKIDA1Q1XH10 827 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC40Q4G0X9 1142 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 GRIPAP1Q4V328 841 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 TMEM259Q4ZIN3 620 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SBK1Q52WX2 424 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 FIGNQ5HY92 759 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 EPHA10Q5JZY3 1008 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SFMBT2Q5VUG0 894 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CHRDL2Q6WN34 429 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCNI2Q6ZMN8 369 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 PIK3AP1Q6ZUJ8 805 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC121Q6ZUS5 278 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 STOX1Q6ZVD7 989 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 CPLX4Q7Z7G2 160 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 USP37Q86T82 979 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 NLRP10Q86W26 655 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 DZIP1Q86YF9 867 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SULF1Q8IWU6 871 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 ANKRD13AQ8IZ07 590 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 FNBP4Q8N3X1 1017 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MMGT1Q8N4V1 131 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 EIF1ADQ8N9N8 165 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 TC2NQ8N9U0 490 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 MSANTD4Q8NCY6 345 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 C3orf20Q8ND61 904 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 IPO4Q8TEX9 1081 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 WHAMMQ8TF30 809 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 COG1Q8WTW3 980 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SYN2Q92777 582 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 P3H4Q92791 437 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SYMPKQ92797 1274 aaKnown RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SYTL4Q96C24 671 aaPredicted RBP2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 RUNDC3BQ96NL0 473 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SETDB2Q96T68 719 aa2.29□□□□□ -2.04
RNU1-40P-201ENST00000516816 SLF1Q9BQI6 1058 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms