RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 LARGE1O95461 756 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 FMNL1O95466 1100 aaPredicted RBP8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 HSP90AA1P07900 732 aaKnown RBP8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 COPB2P35606 906 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 HERVK_113P62684 666 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 CUL4AQ13619 759 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 TAF1CQ15572 869 aaPredicted RBP8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 NTRK3Q16288 839 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 SAMD1Q6SPF0 538 aaPredicted RBP8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 CCDC82Q8N4S0 544 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 SMCR8Q8TEV9 937 aaPredicted RBP8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 MTMR8Q96EF0 704 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 SLC26A6Q9BXS9 759 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 RANBP17Q9H2T7 1088 aaKnown RBP8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 JMJD4Q9H9V9 463 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 SLC38A10Q9HBR0 1119 aa8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 RBM19Q9Y4C8 960 aaKnown RBP8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 V9GY48 417 aaPredicted RBP8.18□□□□□ -1.1
SCARNA6-201ENST00000515982 SPDYE16A6NNV3 312 aaPredicted RBP8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 IGF2BP3O00425 579 aaKnown RBP eCLIP8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 ATP2A1O14983 1001 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 ZBTB5O15062 677 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 CYTH3O43739 400 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 DEXIO95424 95 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 XBP1P17861 261 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 STAT3P40763 770 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 CCNA1P78396 465 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 FUT2Q10981 343 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 CDC37Q16543 378 aaPredicted RBP8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 TKFCQ3LXA3 575 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 RASGRP2Q7LDG7 609 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 NBPF11Q86T75 865 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 FBXO11Q86XK2 927 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 CPXCR1Q8N123 301 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 FAM177A1Q8N128 213 aaPredicted RBP8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 CMTR1Q8N1G2 835 aaKnown RBP8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 FAM184AQ8NB25 1140 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 GPRC5AQ8NFJ5 357 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 ATG4CQ96DT6 458 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 PIGSQ96S52 555 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 AMNQ9BXJ7 453 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 ORC3Q9UBD5 711 aaPredicted RBP8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 SMC3Q9UQE7 1217 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 STK36Q9NRP7 1315 aa8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 BAZ2BQ9UIF8 2168 aaKnown RBP8.17□□□□□ -1.1
SCARNA6-201ENST00000515982 hCG_1984214I3L0E3 225 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 TLR2O60603 784 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 CTDNEP1O95476 244 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 SLC25A27O95847 323 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 ICAM1P05362 532 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 CYP2C8P10632 490 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 SCG2P13521 617 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 PDIA4P13667 645 aaKnown RBP8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 TMEM132BQ14DG7 1078 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 PFKFB3Q16875 520 aaPredicted RBP8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 QRICH1Q2TAL8 776 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 CCDC174Q6PII3 467 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 HOMER1Q86YM7 354 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 TEX2Q8IWB9 1127 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 CCAR1Q8IX12 1150 aaKnown RBP8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 SAMD3Q8N6K7 520 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 ZNF713Q8N859 430 aaPredicted RBP8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 NSUN7Q8NE18 718 aaKnown RBP8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 SMARCC2Q8TAQ2 1214 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 CCDC12Q8WUD4 166 aaPredicted RBP8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 PIBF1Q8WXW3 757 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 CNTNAP5Q8WYK1 1306 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 PHKBQ93100 1093 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 CFHR5Q9BXR6 569 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 TEX13BQ9BXU2 312 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 MAF1Q9H063 256 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 GLT8D2Q9H1C3 349 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 CPVLQ9H3G5 476 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 CWC22Q9HCG8 908 aaKnown RBP8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 SH3GLB2Q9NR46 395 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 RBPJLQ9UBG7 517 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 MORF4L1Q9UBU8 362 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 CCPG1Q9ULG6 757 aa8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 MRPL11Q9Y3B7 192 aaKnown RBP8.16□□□□□ -1.1
SCARNA6-201ENST00000515982 ABCB11O95342 1321 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 PTPDC1A2A3K4 754 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 TRPA1O75762 1119 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 PDCP20941 246 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 MRPL12P52815 198 aaKnown RBP8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 ERVK-9P63128 1117 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 ERVK-24P63145 666 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 ST3GAL1Q11201 340 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 TRIM29Q14134 588 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 PLS1Q14651 629 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 FAM110CQ1W6H9 321 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 SLC35G1Q2M3R5 365 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 C17orf99Q6UX52 265 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 MCF2L2Q86YR7 1114 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 RIOX2Q8IUF8 465 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 ANKRD13CQ8N6S4 541 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 RGS22Q8NE09 1264 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 SHCBP1Q8NEM2 672 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 CHST13Q8NET6 341 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 REPS2Q8NFH8 660 aa8.15□□□□□ -1.1
SCARNA6-201ENST00000515982 DDX11Q96FC9 970 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms