RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FGD4Q96M96 766 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 TMEM47Q9BQJ4 181 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 RNF41Q9H4P4 317 aaPredicted RBP10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 TOMM22Q9NS69 142 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 RBM27Q9P2N5 1060 aaKnown RBP10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 FBXO40Q9UH90 709 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 PRR12Q9ULL5 1215 aa10.71□□□□□ -0.69
PDLIM5-209ENST00000506632 SMCHD1A6NHR9 2005 aa10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 SYNGAP1Q96PV0 1343 aa10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 SNHG28P0DPA3 235 aa10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 TAL1P17542 331 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 FXR1P51114 621 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 LRRC26Q2I0M4 334 aa10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 C7orf61Q8IZ16 206 aa10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 ESR2Q92731 530 aa10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 DDX11Q96FC9 970 aa10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 TTC14Q96N46 770 aa10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 CTDP1Q9Y5B0 961 aaPredicted RBP10.7□□□□□ -0.7
PDLIM5-209ENST00000506632 RAD50Q92878 1312 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 ZNF213O14771 459 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 SNAI1O95863 264 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 PDHBP11177 359 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 IKQ13123 557 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 NBR1Q14596 966 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 LRRC41Q15345 812 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 TKFCQ3LXA3 575 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 ANO1Q5XXA6 986 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 TTBK2Q6IQ55 1244 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 FAM133AQ8N9E0 248 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 ARRDC4Q8NCT1 418 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 CHMP4CQ96CF2 233 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 AGBL1Q96MI9 1066 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 GDF15Q99988 308 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 RANBP17Q9H2T7 1088 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 ACAD9Q9H845 621 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 RNF146Q9NTX7 359 aa10.69□□□□□ -0.7
PDLIM5-209ENST00000506632 RANBP2P49792 3224 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 A0A1W2PPC1 479 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 ICAM1P05362 532 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 AKR1A1P14550 325 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 CHMLP26374 656 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 SLC4A3P48751 1232 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 CNTN2Q02246 1040 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 ZNF543Q08ER8 600 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 SNX17Q15036 470 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 IMMTQ16891 758 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 CCDC96Q2M329 555 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 GJC2Q5T442 439 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 DGKHQ86XP1 1220 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 ANKRD35Q8N283 1001 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 ANKS1AQ92625 1134 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 SENP6Q9GZR1 1112 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 A1CFQ9NQ94 594 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 HOMER2Q9NSB8 354 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 CTNNA3Q9UI47 895 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 ISY1Q9ULR0 285 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 ZMYND8Q9ULU4 1186 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 CNPY2Q9Y2B0 182 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 MCM3APO60318 1980 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 LCTP09848 1927 aa10.68□□□□□ -0.7
PDLIM5-209ENST00000506632 ASTN1O14525 1302 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 FRMPD2Q68DX3 1309 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 B4E1Z4 1266 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 KBTBD13C9JR72 458 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 KDM4AO75164 1064 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 ADAMTS4O75173 837 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 RARBP10826 455 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 ALAS1P13196 640 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 BMP8BP34820 402 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 SLC16A2P36021 539 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 SNAP25P60880 206 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 MUM1L1Q5H9M0 696 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 SYDE2Q5VT97 1194 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 CCDC174Q6PII3 467 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 TRERF1Q96PN7 1200 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 KATNBL1Q9H079 304 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 XPNPEP3Q9NQH7 507 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 PHF24Q9UPV7 400 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 MTMR7Q9Y216 660 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 LRRC37A2A6NM11 1700 aa10.67□□□□□ -0.7
PDLIM5-209ENST00000506632 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 POTEB2H3BUK9 544 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 SYN1P17600 705 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 ACVR2BQ13705 512 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 GPATCH4Q5T3I0 446 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 C1orf53Q5VUE5 145 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 SLC39A5Q6ZMH5 540 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 ARMCX2Q7L311 632 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 IQCA1Q86XH1 822 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 CCDC144CPQ8IYA2 1237 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 ENAHQ8N8S7 591 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 LENG1Q96BZ8 264 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 ZSCAN10Q96SZ4 725 aaPredicted RBP10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 ZKSCAN3Q9BRR0 538 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 ABHD16BQ9H3Z7 469 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 GPCPD1Q9NPB8 672 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 CYP39A1Q9NYL5 469 aa10.66□□□□□ -0.7
PDLIM5-209ENST00000506632 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms