RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 THAP9Q9H5L6 903 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 VEZTQ9HBM0 779 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 KLC4Q9NSK0 619 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 TAB2Q9NYJ8 693 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 STIM2Q9P246 746 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 PDS5AQ29RF7 1337 aaKnown RBP17.73■□□□□ 0.43
SCLT1-208ENST00000506368 NUP188Q5SRE5 1749 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 B4E1Z4 1266 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 ATP5J2-PTCD1G3V325 749 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 PTCD1O75127 700 aaKnown RBP17.73■□□□□ 0.43
SCLT1-208ENST00000506368 RASSF9O75901 435 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 MRPL12P52815 198 aaKnown RBP17.73■□□□□ 0.43
SCLT1-208ENST00000506368 IFFO1Q0D2I5 559 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 LRRC24Q50LG9 513 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 FIGNQ5HY92 759 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 P3H4Q92791 437 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 SYMPKQ92797 1274 aaKnown RBP17.73■□□□□ 0.43
SCLT1-208ENST00000506368 RNF26Q9BY78 433 aaPredicted RBP17.73■□□□□ 0.43
SCLT1-208ENST00000506368 JADE2Q9NQC1 790 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 TSKSQ9UJT2 592 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 RNF225M0QZC1 329 aaPredicted RBP17.72■□□□□ 0.43
SCLT1-208ENST00000506368 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
SCLT1-208ENST00000506368 SRGAP2O75044 1071 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 RXRAP19793 462 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 LSP1P33241 339 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 SLC39A6Q13433 755 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 SKIDA1Q1XH10 827 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 CCDC40Q4G0X9 1142 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 NAA35Q5VZE5 725 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 ARMC9Q7Z3E5 817 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 CREG2Q8IUH2 290 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 CRACR2BQ8N4Y2 399 aaPredicted RBP17.72■□□□□ 0.43
SCLT1-208ENST00000506368 NELFBQ8WX92 580 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 AIDAQ96BJ3 306 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 ZNF496Q96IT1 587 aaPredicted RBP17.72■□□□□ 0.43
SCLT1-208ENST00000506368 TMOD3Q9NYL9 352 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 TRIM10Q9UDY6 481 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 BCL9O00512 1426 aa17.72■□□□□ 0.43
SCLT1-208ENST00000506368 PPP1R37O75864 691 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 SPATA4Q8NEY3 305 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 ZNF507Q8TCN5 953 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 ASAP1Q9ULH1 1129 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 A0A1W2PQJ5 194 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 HMGB1P1B2RPK0 211 aaPredicted RBP17.71■□□□□ 0.43
SCLT1-208ENST00000506368 ERVV-2B6SEH9 535 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 MYL1P05976 194 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 PAFAH1B1P43034 410 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 ZAP70P43403 619 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 ZBED6P86452 979 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 CRYMQ14894 314 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 TTMPQ5BVD1 217 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 WDR59Q6PJI9 974 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 USP49Q70CQ1 688 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 IFT20Q8IY31 132 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 ALS2CR12Q96Q35 445 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 CABP5Q9NP86 173 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 HYOU1Q9Y4L1 999 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 TNS1Q9HBL0 1735 aaKnown RBP17.71■□□□□ 0.43
SCLT1-208ENST00000506368 CHD4Q14839 1912 aa17.71■□□□□ 0.43
SCLT1-208ENST00000506368 PDE2AO00408 941 aaPredicted RBP17.7■□□□□ 0.42
SCLT1-208ENST00000506368 KIF3CO14782 793 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 FAM107AO95990 144 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 GCFC2P16383 781 aaKnown RBP17.7■□□□□ 0.42
SCLT1-208ENST00000506368 CDC25AP30304 524 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 C2orf54Q08AI8 447 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 SPA17Q15506 151 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 CEP85LQ5SZL2 805 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 PPP4R3AQ6IN85 833 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 GSPT2Q8IYD1 628 aaKnown RBP17.7■□□□□ 0.42
SCLT1-208ENST00000506368 ZNF473Q8WTR7 871 aaKnown RBP17.7■□□□□ 0.42
SCLT1-208ENST00000506368 GDAP1L1Q96MZ0 367 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 KCNJ14Q9UNX9 436 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 SAMM50Q9Y512 469 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 A0A087X0B3 334 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 ERICH2A1L162 156 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 ZMYND10O75800 440 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 PARP1P09874 1014 aaKnown RBP17.7■□□□□ 0.42
SCLT1-208ENST00000506368 KRT2P35908 639 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 CCDC57Q2TAC2 916 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 CFAP58Q5T655 872 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 EIF1ADQ8N9N8 165 aaKnown RBP17.7■□□□□ 0.42
SCLT1-208ENST00000506368 TBC1D22AQ8WUA7 517 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 MIEF2Q96C03 454 aa17.7■□□□□ 0.42
SCLT1-208ENST00000506368 MAGEC2Q9UBF1 373 aaPredicted RBP17.7■□□□□ 0.42
SCLT1-208ENST00000506368 MYH13Q9UKX3 1938 aa17.69■□□□□ 0.42
SCLT1-208ENST00000506368 MYO1FO00160 1098 aa17.69■□□□□ 0.42
SCLT1-208ENST00000506368 SRGNP10124 158 aa17.69■□□□□ 0.42
SCLT1-208ENST00000506368 SLC8A1P32418 973 aa17.69■□□□□ 0.42
SCLT1-208ENST00000506368 PAK2Q13177 524 aa17.69■□□□□ 0.42
SCLT1-208ENST00000506368 PDCLQ13371 301 aa17.69■□□□□ 0.42
SCLT1-208ENST00000506368 PTGISQ16647 500 aa17.69■□□□□ 0.42
SCLT1-208ENST00000506368 FMNL3Q8IVF7 1028 aa17.69■□□□□ 0.42
SCLT1-208ENST00000506368 EPSTI1Q96J88 318 aa17.69■□□□□ 0.42
SCLT1-208ENST00000506368 XDHP47989 1333 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 PPP1R2P41236 205 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 TRAPPC10P48553 1259 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 KCNQ4P56696 695 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 NR5A1Q13285 461 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 SNCBQ16143 134 aa17.68■□□□□ 0.42
SCLT1-208ENST00000506368 CCDC181Q5TID7 509 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 735.7 ms