RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 TCP1P17987 556 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 ZNF827Q17R98 1081 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 FAM102BQ5T8I3 360 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 MCF2L2Q86YR7 1114 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 RASEFQ8IZ41 740 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 DESI2Q9BSY9 194 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 PPANQ9NQ55 473 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 P3H4Q92791 437 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 EFCAB8A8MWE9 144 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 ADCK5Q3MIX3 580 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 ARHGEF16Q5VV41 709 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 CCDC62Q6P9F0 684 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 LRRC47Q8N1G4 583 aaKnown RBP18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 GLG1Q92896 1179 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 RNF26Q9BY78 433 aaPredicted RBP18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 BCL2L12Q9HB09 334 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 TRPC6Q9Y210 931 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 TRPM1Q7Z4N2 1603 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 I3L4J1 428 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 FOSP01100 380 aaPredicted RBP18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 KRT26Q7Z3Y9 468 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 ARHGAP24Q8N264 748 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 GSDMAQ96QA5 445 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 FAM26FQ5R3K3 315 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 GKAP1Q5VSY0 366 aaPredicted RBP18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 ZNF804BA4D1E1 1349 aa18.19■□□□□ 0.5
PCDHA1-203ENST00000504120 KCNK3O14649 394 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 GOLGA8HP0CJ92 632 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 ICA1Q05084 483 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 FAM178BQ8IXR5 827 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 CARD10Q9BWT7 1032 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 LARSQ9P2J5 1176 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 ATP10DQ9P241 1426 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 CDK12Q9NYV4 1490 aaPredicted RBP18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 TESPA1A2RU30 521 aaPredicted RBP18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 IL6STP40189 918 aaPredicted RBP18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 TEKT3Q9BXF9 490 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 PSDA5PKW4 1024 aaPredicted RBP18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 M0QZ92 97 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 PROSER3Q2NL68 480 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 PROCA1Q8NCQ7 364 aaPredicted RBP18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 MCUR1Q96AQ8 359 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 ATG3Q9NT62 314 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 POLR3EQ9NVU0 708 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 ADORA1P30542 326 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 GBP1P32455 592 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 GRK7Q8WTQ7 553 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 PUS3Q9BZE2 481 aaKnown RBP18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 HAUS2Q9NVX0 235 aa18.18■□□□□ 0.5
PCDHA1-203ENST00000504120 KRIT1O00522 736 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 FMNL1O95466 1100 aaPredicted RBP18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 ABCB4P21439 1286 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 CDC25BP30305 580 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 NSMCE1Q8WV22 266 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 K7ENM7 598 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 APBA3O96018 575 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 CYP21A2P08686 494 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 ADAM9Q13443 819 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 APOA5Q6Q788 366 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 ZBTB8OSQ8IWT0 167 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 HACE1Q8IYU2 909 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 ZNF408Q9H9D4 720 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 VPS37BQ9H9H4 285 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 GIPC1O14908 333 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 TBC1D8O95759 1140 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 LIG4P49917 911 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 ZNF131P52739 623 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 PRKG1Q13976 671 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 TDRD7Q8NHU6 1098 aaKnown RBP18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 ALAS1P13196 640 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 CTNNA1P35221 906 aaKnown RBP18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 SIK1P57059 783 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 SLFN13Q68D06 897 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 SRGAP1Q7Z6B7 1085 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 ARHGEF25Q86VW2 580 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 SLC39A2Q9NP94 309 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 C1orf112Q9NSG2 853 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 TLR7Q9NYK1 1049 aaKnown RBP18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 RNF17Q9BXT8 1623 aaKnown RBP18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 CARMIL3Q8ND23 1372 aa18.17■□□□□ 0.5
PCDHA1-203ENST00000504120 RGS16O15492 202 aaPredicted RBP18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 TRIM37O94972 964 aa18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 XKR9Q5GH70 373 aa18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 SDCCAG8Q86SQ7 713 aaPredicted RBP18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 RAB20Q9NX57 234 aa18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 POLR2FP61218 127 aaKnown RBP18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 CCDC17Q96LX7 622 aa18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 LEMD3Q9Y2U8 911 aa18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 SPHKAPQ2M3C7 1700 aa18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 COPB1P53618 953 aaKnown RBP18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 DCAF15Q66K64 600 aa18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 CASC4Q6P4E1 433 aa18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 PLA2G4DQ86XP0 818 aa18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 NSUN7Q8NE18 718 aaKnown RBP18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 MLXIPQ9HAP2 919 aa18.16■□□□□ 0.5
PCDHA1-203ENST00000504120 EPN1Q9Y6I3 576 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms