RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SLC39A5Q6ZMH5 540 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 MFSD6Q6ZSS7 791 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 FAM160B2Q86V87 743 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 TMEM47Q9BQJ4 181 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 GPCPD1Q9NPB8 672 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 PRR12Q9ULL5 1215 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 SYNPO2Q9UMS6 1093 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 ATP11BQ9Y2G3 1177 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 LAMA3Q16787 3333 aa11.34□□□□□ -0.59
MSH5-218ENST00000494646 ZNF213O14771 459 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 SNAI1O95863 264 aaPredicted RBP11.33□□□□□ -0.6
MSH5-218ENST00000494646 PGK1P00558 417 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 RARBP10826 455 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 ALAS1P13196 640 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 SLC16A2P36021 539 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 RTP1P59025 263 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 CNTN2Q02246 1040 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 CCDC96Q2M329 555 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 PPP4R3BQ5MIZ7 849 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 AKNAD1Q5T1N1 836 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 CHST13Q8NET6 341 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 LENG1Q96BZ8 264 aaPredicted RBP11.33□□□□□ -0.6
MSH5-218ENST00000494646 GMCL1Q96IK5 515 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 TRERF1Q96PN7 1200 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 ZKSCAN3Q9BRR0 538 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 XPNPEP3Q9NQH7 507 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 DIAPH3Q9NSV4 1193 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 ZHX1Q9UKY1 873 aaPredicted RBP11.33□□□□□ -0.6
MSH5-218ENST00000494646 CNPY2Q9Y2B0 182 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 LAMA2P24043 3122 aaKnown RBP11.33□□□□□ -0.6
MSH5-218ENST00000494646 ZNF536O15090 1300 aa11.33□□□□□ -0.6
MSH5-218ENST00000494646 FRMPD2Q68DX3 1309 aaPredicted RBP11.33□□□□□ -0.6
MSH5-218ENST00000494646 DNAJC25-GNG10A0A024R161 153 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 POTEB2H3BUK9 544 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 SOX1O00570 391 aaPredicted RBP11.32□□□□□ -0.6
MSH5-218ENST00000494646 FDX1P10109 184 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 PDE4AP27815 886 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 BMP8BP34820 402 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 OAZ1P54368 228 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 MFAP1P55081 439 aaKnown RBP11.32□□□□□ -0.6
MSH5-218ENST00000494646 IRX5P78411 483 aaPredicted RBP11.32□□□□□ -0.6
MSH5-218ENST00000494646 ACVR2BQ13705 512 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 TICAM2Q86XR7 235 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 DCAF4Q8WV16 495 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 LRCH3Q96II8 777 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 UBE2OQ9C0C9 1292 aaKnown RBP11.32□□□□□ -0.6
MSH5-218ENST00000494646 RNF146Q9NTX7 359 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 FBXO40Q9UH90 709 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 NRBP1Q9UHY1 535 aa11.32□□□□□ -0.6
MSH5-218ENST00000494646 PLA2G6O60733 806 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 TOP1P11387 765 aaKnown RBP11.31□□□□□ -0.6
MSH5-218ENST00000494646 AKR1A1P14550 325 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 NOVP48745 357 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 MUM1L1Q5H9M0 696 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 MAMDC4Q6UXC1 1216 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 RNF180Q86T96 592 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 TBC1D10CQ8IV04 446 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 CCDC144CPQ8IYA2 1237 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 FGD4Q96M96 766 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 PURBQ96QR8 312 aaKnown RBP11.31□□□□□ -0.6
MSH5-218ENST00000494646 ACAD9Q9H845 621 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 TCP11L1Q9NUJ3 509 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.31□□□□□ -0.6
MSH5-218ENST00000494646 FAM184BQ9ULE4 1060 aa11.31□□□□□ -0.6
MSH5-218ENST00000494646 DDX49Q9Y6V7 483 aaKnown RBP11.31□□□□□ -0.6
MSH5-218ENST00000494646 A0A1W2PPC1 479 aa11.3□□□□□ -0.6
MSH5-218ENST00000494646 SOWAHBA6NEL2 793 aa11.3□□□□□ -0.6
MSH5-218ENST00000494646 HIP1O00291 1037 aa11.3□□□□□ -0.6
MSH5-218ENST00000494646 TRIM60Q495X7 471 aa11.3□□□□□ -0.6
MSH5-218ENST00000494646 ZNF467Q7Z7K2 595 aaPredicted RBP11.3□□□□□ -0.6
MSH5-218ENST00000494646 MSL3Q8N5Y2 521 aaKnown RBP11.3□□□□□ -0.6
MSH5-218ENST00000494646 LBHD1Q9BQE6 289 aaPredicted RBP11.3□□□□□ -0.6
MSH5-218ENST00000494646 A1CFQ9NQ94 594 aaKnown RBP11.3□□□□□ -0.6
MSH5-218ENST00000494646 PRDM5Q9NQX1 630 aaPredicted RBP11.3□□□□□ -0.6
MSH5-218ENST00000494646 PRKAG2Q9UGJ0 569 aa11.3□□□□□ -0.6
MSH5-218ENST00000494646 CCPG1Q9ULG6 757 aa11.3□□□□□ -0.6
MSH5-218ENST00000494646 NEDD4P46934 1319 aa11.3□□□□□ -0.6
MSH5-218ENST00000494646 SYNGAP1Q96PV0 1343 aa11.3□□□□□ -0.6
MSH5-218ENST00000494646 MYH6P13533 1939 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 B4E1Z4 1266 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 KDM4AO75164 1064 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 ADAMTS4O75173 837 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 GOLGA8HP0CJ92 632 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 TLE2Q04725 743 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 KCNA10Q16322 511 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 TKFCQ3LXA3 575 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 CCDC144BQ3MJ40 725 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 SYDE2Q5VT97 1194 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 NSMFQ6X4W1 530 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.29□□□□□ -0.6
MSH5-218ENST00000494646 ARMCX2Q7L311 632 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 SH3RF1Q7Z6J0 888 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 TDHQ8IZJ6 230 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 FAM133AQ8N9E0 248 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 ESR2Q92731 530 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 TTC14Q96N46 770 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 UBA5Q9GZZ9 404 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 IL25Q9H293 177 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 CPVLQ9H3G5 476 aa11.29□□□□□ -0.6
MSH5-218ENST00000494646 ABHD16BQ9H3Z7 469 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms