RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 CYP4F22Q6NT55 531 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 STAG2Q8N3U4 1231 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 MB21D1Q8N884 522 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 NECAB1Q8N987 351 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 WASF1Q92558 559 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 RRP36Q96EU6 259 aaKnown RBP14.41□□□□□ -0.1
SNX17-208ENST00000493711 NUP88Q99567 741 aaPredicted RBP14.41□□□□□ -0.1
SNX17-208ENST00000493711 RIOX1Q9H6W3 641 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 FAM217BQ9NTX9 383 aaPredicted RBP14.41□□□□□ -0.1
SNX17-208ENST00000493711 PPP1R9AQ9ULJ8 1098 aa14.41□□□□□ -0.1
SNX17-208ENST00000493711 ZBED4O75132 1171 aa14.4□□□□□ -0.1
SNX17-208ENST00000493711 LARGE1O95461 756 aa14.4□□□□□ -0.1
SNX17-208ENST00000493711 RGS19P49795 217 aa14.4□□□□□ -0.1
SNX17-208ENST00000493711 SSRP1Q08945 709 aaKnown RBP14.4□□□□□ -0.1
SNX17-208ENST00000493711 MKRN3Q13064 507 aaKnown RBP14.4□□□□□ -0.1
SNX17-208ENST00000493711 TREML2Q5T2D2 321 aa14.4□□□□□ -0.1
SNX17-208ENST00000493711 GPAT2Q6NUI2 795 aa14.4□□□□□ -0.1
SNX17-208ENST00000493711 LBX2Q6XYB7 198 aa14.4□□□□□ -0.1
SNX17-208ENST00000493711 RAB11FIP4Q86YS3 637 aa14.4□□□□□ -0.1
SNX17-208ENST00000493711 CCDC83Q8IWF9 413 aa14.4□□□□□ -0.1
SNX17-208ENST00000493711 FAM177A1Q8N128 213 aaPredicted RBP14.4□□□□□ -0.1
SNX17-208ENST00000493711 PARK7Q99497 189 aaKnown RBP14.4□□□□□ -0.1
SNX17-208ENST00000493711 RNF26Q9BY78 433 aaPredicted RBP14.4□□□□□ -0.1
SNX17-208ENST00000493711 NCOA5Q9HCD5 579 aaKnown RBP14.4□□□□□ -0.1
SNX17-208ENST00000493711 SEC63Q9UGP8 760 aaKnown RBP14.4□□□□□ -0.1
SNX17-208ENST00000493711 WDR33Q9C0J8 1336 aaKnown RBP14.4□□□□□ -0.1
SNX17-208ENST00000493711 STK36Q9NRP7 1315 aa14.4□□□□□ -0.1
SNX17-208ENST00000493711 MYH8P13535 1937 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 BTBD19C9JJ37 291 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 hCG_1984214I3L0E3 225 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 PDHXO00330 501 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 PRPF3O43395 683 aaKnown RBP14.39□□□□□ -0.11
SNX17-208ENST00000493711 PLEKHA8P1O95397 391 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 FMNL1O95466 1100 aaPredicted RBP14.39□□□□□ -0.11
SNX17-208ENST00000493711 HSPA8P11142 646 aaKnown RBP14.39□□□□□ -0.11
SNX17-208ENST00000493711 GCLCP48506 637 aaPredicted RBP14.39□□□□□ -0.11
SNX17-208ENST00000493711 KIF23Q02241 960 aaPredicted RBP14.39□□□□□ -0.11
SNX17-208ENST00000493711 FUT2Q10981 343 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 NTRK3Q16288 839 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 ADGRF4Q8IZF3 695 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 SRBD1Q8N5C6 995 aaKnown RBP14.39□□□□□ -0.11
SNX17-208ENST00000493711 ZNF713Q8N859 430 aaPredicted RBP14.39□□□□□ -0.11
SNX17-208ENST00000493711 KIFC2Q96AC6 838 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 UBA5Q9GZZ9 404 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 PRR12Q9ULL5 1215 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 OTOFQ9HC10 1997 aa14.39□□□□□ -0.11
SNX17-208ENST00000493711 PNMA6FA0A0J9YX94 578 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 ZBTB5O15062 677 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 DEXIO95424 95 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 PDIA4P13667 645 aaKnown RBP14.38□□□□□ -0.11
SNX17-208ENST00000493711 SLC16A2P36021 539 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 PSEN1P49768 467 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 OAZ1P54368 228 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 GRM1Q13255 1194 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 DGKZQ13574 1117 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 TTBK2Q6IQ55 1244 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 TEX2Q8IWB9 1127 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 NSUN7Q8NE18 718 aaKnown RBP14.38□□□□□ -0.11
SNX17-208ENST00000493711 MTMR8Q96EF0 704 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 ASCC2Q9H1I8 757 aaPredicted RBP14.38□□□□□ -0.11
SNX17-208ENST00000493711 JMJD4Q9H9V9 463 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 ADAMTS5Q9UNA0 930 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 SMC3Q9UQE7 1217 aa14.38□□□□□ -0.11
SNX17-208ENST00000493711 PTPDC1A2A3K4 754 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 CCDC85CA6NKD9 419 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 VWA5AO00534 786 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 XBP1P17861 261 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 COPB2P35606 906 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 HERVK_113P62684 666 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 MAP2K1Q02750 393 aaPredicted RBP14.37□□□□□ -0.11
SNX17-208ENST00000493711 RASGRP2Q7LDG7 609 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 NBPF11Q86T75 865 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 RGS22Q8NE09 1264 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 SMARCC2Q8TAQ2 1214 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 SMCR8Q8TEV9 937 aaPredicted RBP14.37□□□□□ -0.11
SNX17-208ENST00000493711 CCDC12Q8WUD4 166 aaPredicted RBP14.37□□□□□ -0.11
SNX17-208ENST00000493711 SLC26A6Q9BXS9 759 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 MAF1Q9H063 256 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 RANBP17Q9H2T7 1088 aaKnown RBP14.37□□□□□ -0.11
SNX17-208ENST00000493711 SLC38A10Q9HBR0 1119 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 VAT1LQ9HCJ6 419 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 FBXO28Q9NVF7 368 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 RABGAP1Q9Y3P9 1069 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 V9GY48 417 aaPredicted RBP14.37□□□□□ -0.11
SNX17-208ENST00000493711 CNTNAP5Q8WYK1 1306 aa14.37□□□□□ -0.11
SNX17-208ENST00000493711 ATAD5Q96QE3 1844 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 SPDYE16A6NNV3 312 aaPredicted RBP14.36□□□□□ -0.11
SNX17-208ENST00000493711 ATP2A1O14983 1001 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 CYTH3O43739 400 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 CTDNEP1O95476 244 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 PDCP20941 246 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 CDC37Q16543 378 aaPredicted RBP14.36□□□□□ -0.11
SNX17-208ENST00000493711 TKFCQ3LXA3 575 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 FAM43AQ8N2R8 423 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 CCDC82Q8N4S0 544 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 FAM184AQ8NB25 1140 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 P2RX7Q99572 595 aaKnown RBP14.36□□□□□ -0.11
SNX17-208ENST00000493711 PTPN18Q99952 460 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
SNX17-208ENST00000493711 ZFYVE28Q9HCC9 887 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms