RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 ARMCX2Q7L311 632 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 CHST13Q8NET6 341 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 MKL1Q969V6 931 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 GPATCH3Q96I76 525 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 UPF3AQ9H1J1 476 aaKnown RBP14.71□□□□□ -0.05
SAMM50-205ENST00000493621 ZNF576Q9H609 170 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 ZNF287Q9HBT7 754 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 HOMER2Q9NSB8 354 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 MTMR4Q9NYA4 1195 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 FBXO40Q9UH90 709 aa14.71□□□□□ -0.05
SAMM50-205ENST00000493621 ISY1Q9ULR0 285 aaKnown RBP14.71□□□□□ -0.05
SAMM50-205ENST00000493621 SPTBN5Q9NRC6 3674 aaKnown RBP14.71□□□□□ -0.06
SAMM50-205ENST00000493621 GBF1Q92538 1859 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
SAMM50-205ENST00000493621 M0R2C6 588 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 TTLL1O95922 423 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 BMP3P12645 472 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 GNAT2P19087 354 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 PPIGQ13427 754 aaKnown RBP eCLIP14.7□□□□□ -0.06
SAMM50-205ENST00000493621 GNASQ5JWF2 1037 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 C20orf194Q5TEA3 1177 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 CCDC144CPQ8IYA2 1237 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 GMCL1P1Q8NEA9 526 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 TIFAQ96CG3 184 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 PPP1R12CQ9BZL4 782 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 RCAN3Q9UKA8 241 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 MYO9BQ13459 2157 aa14.7□□□□□ -0.06
SAMM50-205ENST00000493621 LRRC37A2A6NM11 1700 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 GRXCR1A8MXD5 290 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 ARVCFO00192 962 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 TLR3O15455 904 aaKnown RBP14.69□□□□□ -0.06
SAMM50-205ENST00000493621 ZFYP08048 801 aaPredicted RBP14.69□□□□□ -0.06
SAMM50-205ENST00000493621 CSF2RAP15509 400 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 OAZ1P54368 228 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 CNTN2Q02246 1040 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 TMEM240Q5SV17 173 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 DIEXFQ68CQ4 756 aaKnown RBP14.69□□□□□ -0.06
SAMM50-205ENST00000493621 SLFN13Q68D06 897 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 CCDC174Q6PII3 467 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 CCDC129Q6ZRS4 1044 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 C16orf59Q7L2K0 433 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 IFNL3Q8IZI9 196 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 USP38Q8NB14 1042 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 CHMP4CQ96CF2 233 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 SYNPO2Q9UMS6 1093 aa14.69□□□□□ -0.06
SAMM50-205ENST00000493621 PATL2C9JE40 543 aaKnown RBP14.68□□□□□ -0.06
SAMM50-205ENST00000493621 TMEM232C9JQI7 657 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 TSPY3P0CV98 308 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 TSPY8P0CW00 308 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 ACRP10323 421 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 PBX2P40425 430 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 BEX3Q00994 111 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 NOL8Q76FK4 1167 aaKnown RBP14.68□□□□□ -0.06
SAMM50-205ENST00000493621 FAM126BQ8IXS8 530 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 TMEM199Q8N511 208 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 NEDD1Q8NHV4 660 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 SYMPKQ92797 1274 aaKnown RBP14.68□□□□□ -0.06
SAMM50-205ENST00000493621 KATNBL1Q9H079 304 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 ACAD9Q9H845 621 aa14.68□□□□□ -0.06
SAMM50-205ENST00000493621 CHD9Q3L8U1 2897 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 TTC28Q96AY4 2481 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.67□□□□□ -0.06
SAMM50-205ENST00000493621 CTAGE5O15320 804 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 FDX1P10109 184 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 STAT2P52630 851 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 TNFAIP2Q03169 654 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 PDE4BQ07343 736 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 IKQ13123 557 aaPredicted RBP14.67□□□□□ -0.06
SAMM50-205ENST00000493621 ZNF365Q70YC5 407 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 FAM133AQ8N9E0 248 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 AGBL1Q96MI9 1066 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 SEC62Q99442 399 aaKnown RBP14.67□□□□□ -0.06
SAMM50-205ENST00000493621 PBX4Q9BYU1 374 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 NACAP1Q9BZK3 213 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 DCTPP1Q9H773 170 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 RNF146Q9NTX7 359 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 PLIN4Q96Q06 1357 aa14.67□□□□□ -0.06
SAMM50-205ENST00000493621 SOWAHBA6NEL2 793 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 CYP2C18P33260 490 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 TFAP4Q01664 338 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 RASIP1Q5U651 963 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 PSRC1Q6PGN9 363 aaPredicted RBP14.66□□□□□ -0.06
SAMM50-205ENST00000493621 FAM160B2Q86V87 743 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 CHURC1Q8WUH1 139 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 PPM1EQ8WY54 764 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 GAS2L1Q99501 681 aaPredicted RBP14.66□□□□□ -0.06
SAMM50-205ENST00000493621 A1CFQ9NQ94 594 aaKnown RBP14.66□□□□□ -0.06
SAMM50-205ENST00000493621 PRDM6Q9NQX0 595 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 LCTP09848 1927 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 ASTN1O14525 1302 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 ZNF536O15090 1300 aa14.66□□□□□ -0.06
SAMM50-205ENST00000493621 ASB14A6NK59 587 aa14.65□□□□□ -0.06
SAMM50-205ENST00000493621 CD4P01730 458 aa14.65□□□□□ -0.06
SAMM50-205ENST00000493621 SLC3A2P08195 630 aaKnown RBP14.65□□□□□ -0.06
SAMM50-205ENST00000493621 ALAS1P13196 640 aa14.65□□□□□ -0.06
SAMM50-205ENST00000493621 MCCP23508 829 aa14.65□□□□□ -0.06
SAMM50-205ENST00000493621 SLC1A4P43007 532 aa14.65□□□□□ -0.06
SAMM50-205ENST00000493621 SNAP25P60880 206 aa14.65□□□□□ -0.06
SAMM50-205ENST00000493621 NKX3-2P78367 333 aa14.65□□□□□ -0.06
SAMM50-205ENST00000493621 PPARAQ07869 468 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms