RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 BMP3P12645 472 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 ZNF165P49910 485 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 ORC2Q13416 577 aaPredicted RBP10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 CDC37Q16543 378 aaPredicted RBP10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 KIF4BQ2VIQ3 1234 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 SYDE2Q5VT97 1194 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 C11orf57Q6ZUT1 292 aaPredicted RBP10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 CDAN1Q8IWY9 1227 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 NAT10Q9H0A0 1025 aaKnown RBP10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 GLT8D2Q9H1C3 349 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 SH2D4AQ9H788 454 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 GOPCQ9HD26 462 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 RIC8AQ9NPQ8 531 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 PGAP2Q9UHJ9 254 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 USP25Q9UHP3 1055 aa10.41□□□□□ -0.74
SMARCC1-208ENST00000492896 VWA3AA6NCI4 1184 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 POLR2DO15514 142 aaKnown RBP10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 PPP1R11O60927 126 aaPredicted RBP10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 LONP1P36776 959 aaKnown RBP10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 CAP2P40123 477 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 NLRP12P59046 1061 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 IKQ13123 557 aaPredicted RBP10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 RASA3Q14644 834 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 QRICH1Q2TAL8 776 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 LONRF3Q496Y0 759 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 JAKMIP3Q5VZ66 844 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 KANK3Q6NY19 840 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 NEK8Q86SG6 692 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 LUZP1Q86V48 1076 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 SYMPKQ92797 1274 aaKnown RBP10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 ERCC4Q92889 916 aaPredicted RBP10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 CUL5Q93034 780 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 NUP88Q99567 741 aaPredicted RBP10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 PYM1Q9BRP8 204 aaKnown RBP10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 BIN2Q9UBW5 565 aaPredicted RBP10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 SERTAD1Q9UHV2 236 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 CNOT7Q9UIV1 285 aaKnown RBP10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 TUBE1Q9UJT0 475 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 TMX2Q9Y320 296 aa10.4□□□□□ -0.74
SMARCC1-208ENST00000492896 PARP14Q460N5 1801 aa10.4□□□□□ -0.75
SMARCC1-208ENST00000492896 A0A1W2PRG0 241 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 GOLGA6L19H0YKK7 550 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 ACTN4O43707 911 aaKnown RBP10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 NEMFO60524 1076 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 EGFRP00533 1210 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 ASNSP08243 561 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 OR52Z1P0C646 297 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 TXLNAP40222 546 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 PRPHP41219 470 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 ECE1P42892 770 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 MRPL12P52815 198 aaKnown RBP10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 MAP3K10Q02779 954 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 PNOCQ13519 176 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 POSTNQ15063 836 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 LETM2Q2VYF4 491 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 TBC1D10BQ4KMP7 808 aaPredicted RBP10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 BTNL9Q6UXG8 535 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 DTHD1Q6ZMT9 781 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 USP49Q70CQ1 688 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 MIGA2Q7L4E1 593 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 SAMD7Q7Z3H4 446 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 C4orf32Q8N8J7 132 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 ACER1Q8TDN7 264 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 TBCKQ8TEA7 893 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 DHX58Q96C10 678 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 GINM1Q9NU53 330 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 TMEM260Q9NX78 707 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 HACL1Q9UJ83 578 aa10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 POLR2AP24928 1970 aaKnown RBP10.39□□□□□ -0.75
SMARCC1-208ENST00000492896 PHIPQ8WWQ0 1821 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 A0A087WWV3 80 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 BECN2A8MW95 431 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 TMEM232C9JQI7 657 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 H7C1D1 291 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 BIN1O00499 593 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 CCNT1O60563 726 aaKnown RBP10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 ADCY5O95622 1261 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 LMNB1P20700 586 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 CLK2P49760 499 aaKnown RBP10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 PLCB2Q00722 1185 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 IQCB1Q15051 598 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 IL17AQ16552 155 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 UBE2SQ16763 222 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 DPCR1Q3MIW9 517 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 ARHGAP27Q6ZUM4 889 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 APOBEC3FQ8IUX4 373 aaKnown RBP10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 PDILTQ8N807 584 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 EPSTI1Q96J88 318 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 TEPSINQ96N21 525 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 BPIFA3Q9BQP9 254 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 AMNQ9BXJ7 453 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 TMEM60Q9H2L4 133 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 VCPKMTQ9H867 229 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 SMCHD1A6NHR9 2005 aa10.38□□□□□ -0.75
SMARCC1-208ENST00000492896 A0A087X0B3 334 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 SLFN14P0C7P3 912 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 STAT2P52630 851 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 TRAF1Q13077 416 aa10.37□□□□□ -0.75
SMARCC1-208ENST00000492896 HS1BP3Q53T59 392 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms