RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 KLRF2D3W0D1 207 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 ADCY3O60266 1144 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 SLC16A2P36021 539 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 GNAQP50148 359 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 KCTD2Q14681 263 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 PPP2R5BQ15173 497 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 C8orf34Q49A92 452 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 WDR78Q5VTH9 848 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 NFXL1Q6ZNB6 911 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 CTCFLQ8NI51 663 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-212ENST00000489728 LZTS2Q9BRK4 669 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 AGXT2Q9BYV1 514 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 RAVER2Q9HCJ3 691 aaKnown RBP12.91□□□□□ -0.34
CPSF7-212ENST00000489728 MAD2L2Q9UI95 211 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 DIS3Q9Y2L1 958 aaKnown RBP12.91□□□□□ -0.34
CPSF7-212ENST00000489728 GTF3C3Q9Y5Q9 886 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 SLC12A7Q9Y666 1083 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 DOCK3Q8IZD9 2030 aa12.91□□□□□ -0.34
CPSF7-212ENST00000489728 PFASO15067 1338 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 RBBP6Q7Z6E9 1792 aaKnown RBP12.9□□□□□ -0.34
CPSF7-212ENST00000489728 HMGCRP04035 888 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 GOLGA8HP0CJ92 632 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 CAPN2P17655 700 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 CASTP20810 708 aaKnown RBP12.9□□□□□ -0.34
CPSF7-212ENST00000489728 RPS6KB1P23443 525 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 ADORA2AP29274 412 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 UBXN2AP68543 259 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 SYNE3Q6ZMZ3 975 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 RUFY3Q7L099 469 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 ADGRF4Q8IZF3 695 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 CPXCR1Q8N123 301 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 ZNF333Q96JL9 665 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 MMP19Q99542 508 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 SPZ1Q9BXG8 430 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 ACAD9Q9H845 621 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 CCPG1Q9ULG6 757 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 CYP46A1Q9Y6A2 500 aa12.9□□□□□ -0.34
CPSF7-212ENST00000489728 FGD1P98174 961 aa12.89□□□□□ -0.35
CPSF7-212ENST00000489728 COL9A3Q14050 684 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-212ENST00000489728 OLFML2BQ68BL8 750 aa12.89□□□□□ -0.35
CPSF7-212ENST00000489728 APOA5Q6Q788 366 aa12.89□□□□□ -0.35
CPSF7-212ENST00000489728 MSL3Q8N5Y2 521 aaKnown RBP12.89□□□□□ -0.35
CPSF7-212ENST00000489728 MTMR8Q96EF0 704 aa12.89□□□□□ -0.35
CPSF7-212ENST00000489728 RIOX1Q9H6W3 641 aa12.89□□□□□ -0.35
CPSF7-212ENST00000489728 RNF146Q9NTX7 359 aa12.89□□□□□ -0.35
CPSF7-212ENST00000489728 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
CPSF7-212ENST00000489728 NID2Q14112 1375 aa12.89□□□□□ -0.35
CPSF7-212ENST00000489728 DNAJC25-GNG10A0A024R161 153 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 ECM2O94769 699 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-212ENST00000489728 EVCP57679 992 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 CDC37Q16543 378 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-212ENST00000489728 CCDC174Q6PII3 467 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 ZNF467Q7Z7K2 595 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-212ENST00000489728 DPP9Q86TI2 863 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 FANCBQ8NB91 859 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 RGS22Q8NE09 1264 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 TRERF1Q96PN7 1200 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 UBA5Q9GZZ9 404 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 JMJD4Q9H9V9 463 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
CPSF7-212ENST00000489728 RIPK3Q9Y572 518 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 ABCB11O95342 1321 aa12.88□□□□□ -0.35
CPSF7-212ENST00000489728 LOC102724159A0A0B4J2E5 919 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 CCDC196A0A1B0GTZ2 297 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 ZBTB5O15062 677 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 ZBTB43O43298 467 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
CPSF7-212ENST00000489728 IGHA2P01877 340 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 ALAS1P13196 640 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 CYP2B6P20813 491 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 PWP2Q15269 919 aaKnown RBP12.87□□□□□ -0.35
CPSF7-212ENST00000489728 ZNF792Q3KQV3 632 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 MAP3K21Q5TCX8 1036 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 MFSD14CQ5VZR4 134 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 FBXO11Q86XK2 927 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 ANKRD35Q8N283 1001 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 SAMD3Q8N6K7 520 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 IL27Q8NEV9 243 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 SH3TC2Q8TF17 1288 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 NUP133Q8WUM0 1156 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 TRIB2Q92519 343 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 DDX11Q96FC9 970 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 AMNQ9BXJ7 453 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 LRRC2Q9BYS8 371 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 ALDH8A1Q9H2A2 487 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-212ENST00000489728 NRBP1Q9UHY1 535 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 PLXNA1Q9UIW2 1896 aa12.87□□□□□ -0.35
CPSF7-212ENST00000489728 CENPFP49454 3210 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 MYH6P13533 1939 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 ZNFX1Q9P2E3 1918 aaKnown RBP12.86□□□□□ -0.35
CPSF7-212ENST00000489728 KLF18A0A0U1RQI7 1052 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 COBLO75128 1261 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 INHAP05111 366 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 ELNP15502 786 aa12.86□□□□□ -0.35
CPSF7-212ENST00000489728 QRICH1Q2TAL8 776 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms