RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 LIFRP42702 1097 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 NTRK3Q16288 839 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 SUPT20HL1Q3ZLR7 823 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 PHKBQ93100 1093 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 LAMB1P07942 1786 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 GOLGA8AA7E2F4 631 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 TSPY3P0CV98 308 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 TSPY8P0CW00 308 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 TATDN1Q6P1N9 297 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 ZNF397Q8NF99 534 aaPredicted RBP20.84■□□□□ 0.93
COL16A1-215ENST00000488897 PPP1R13BQ96KQ4 1090 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 ELP3Q9H9T3 547 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 LY9Q9HBG7 655 aa20.84■□□□□ 0.93
COL16A1-215ENST00000488897 STK36Q9NRP7 1315 aa20.83■□□□□ 0.93
COL16A1-215ENST00000488897 RXRAP19793 462 aa20.83■□□□□ 0.93
COL16A1-215ENST00000488897 ECE1P42892 770 aa20.83■□□□□ 0.93
COL16A1-215ENST00000488897 MYL5Q02045 173 aa20.83■□□□□ 0.93
COL16A1-215ENST00000488897 TMEM67Q5HYA8 995 aa20.83■□□□□ 0.93
COL16A1-215ENST00000488897 WASF1Q92558 559 aa20.83■□□□□ 0.93
COL16A1-215ENST00000488897 DDX41Q9UJV9 622 aaKnown RBP20.83■□□□□ 0.93
COL16A1-215ENST00000488897 VGLL4Q14135 290 aa20.83■□□□□ 0.92
COL16A1-215ENST00000488897 MYL10Q9BUA6 226 aa20.83■□□□□ 0.92
COL16A1-215ENST00000488897 CAP2P40123 477 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 SSRP1Q08945 709 aaKnown RBP20.82■□□□□ 0.92
COL16A1-215ENST00000488897 ABCB5Q2M3G0 1257 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 ELOA2Q8IYF1 753 aaPredicted RBP20.82■□□□□ 0.92
COL16A1-215ENST00000488897 ACER1Q8TDN7 264 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 CEP95Q96GE4 821 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 EHD4Q9H223 541 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 PPP1R12BO60237 982 aaPredicted RBP20.82■□□□□ 0.92
COL16A1-215ENST00000488897 UBASH3AP57075 661 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 ISM2Q6H9L7 571 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 METTL16Q86W50 562 aaKnown RBP20.82■□□□□ 0.92
COL16A1-215ENST00000488897 SMC1BQ8NDV3 1235 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 HSD3B7Q9H2F3 369 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 CNNM2Q9H8M5 875 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 FAM217BQ9NTX9 383 aaPredicted RBP20.82■□□□□ 0.92
COL16A1-215ENST00000488897 STX8Q9UNK0 236 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 SLC12A7Q9Y666 1083 aa20.82■□□□□ 0.92
COL16A1-215ENST00000488897 SIAH1Q8IUQ4 282 aa20.81■□□□□ 0.92
COL16A1-215ENST00000488897 L2HGDHQ9H9P8 463 aa20.81■□□□□ 0.92
COL16A1-215ENST00000488897 HERC5Q9UII4 1024 aaKnown RBP20.81■□□□□ 0.92
COL16A1-215ENST00000488897 ROBO3Q96MS0 1386 aa20.81■□□□□ 0.92
COL16A1-215ENST00000488897 SERPINC1P01008 464 aa20.8■□□□□ 0.92
COL16A1-215ENST00000488897 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.8■□□□□ 0.92
COL16A1-215ENST00000488897 ZNF341Q9BYN7 854 aa20.8■□□□□ 0.92
COL16A1-215ENST00000488897 GBA2Q9HCG7 927 aaPredicted RBP20.8■□□□□ 0.92
COL16A1-215ENST00000488897 HOOK1Q9UJC3 728 aaKnown RBP20.8■□□□□ 0.92
COL16A1-215ENST00000488897 MORC2Q9Y6X9 1032 aaPredicted RBP20.8■□□□□ 0.92
COL16A1-215ENST00000488897 IFIT3O14879 490 aaKnown RBP20.8■□□□□ 0.92
COL16A1-215ENST00000488897 FGRP09769 529 aa20.8■□□□□ 0.92
COL16A1-215ENST00000488897 ATP1A3P13637 1013 aa20.8■□□□□ 0.92
COL16A1-215ENST00000488897 PNOCQ13519 176 aa20.8■□□□□ 0.92
COL16A1-215ENST00000488897 KRBA2Q6ZNG9 492 aa20.8■□□□□ 0.92
COL16A1-215ENST00000488897 LRRC47Q8N1G4 583 aaKnown RBP20.8■□□□□ 0.92
COL16A1-215ENST00000488897 CNNM3Q8NE01 707 aa20.8■□□□□ 0.92
COL16A1-215ENST00000488897 KRT23Q9C075 422 aa20.8■□□□□ 0.92
COL16A1-215ENST00000488897 KCNH3Q9ULD8 1083 aa20.8■□□□□ 0.92
COL16A1-215ENST00000488897 PPP2R3BQ9Y5P8 575 aa20.8■□□□□ 0.92
COL16A1-215ENST00000488897 A0A1W2PRG0 241 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 FMNL1O95466 1100 aaPredicted RBP20.79■□□□□ 0.92
COL16A1-215ENST00000488897 MAP3K10Q02779 954 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 KRI1Q8N9T8 703 aaKnown RBP20.79■□□□□ 0.92
COL16A1-215ENST00000488897 CLIC6Q96NY7 704 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 ZBTB21Q9ULJ3 1066 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 PASKQ96RG2 1323 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 MYH8P13535 1937 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 TRIM75PA6NK02 468 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 NF2P35240 595 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 SAFBQ15424 915 aaKnown RBP eCLIP20.79■□□□□ 0.92
COL16A1-215ENST00000488897 SPICE1Q8N0Z3 855 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 ESR2Q92731 530 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 OTUD5Q96G74 571 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 SLC26A6Q9BXS9 759 aa20.79■□□□□ 0.92
COL16A1-215ENST00000488897 TBC1D12O60347 775 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 IFNAR1P17181 557 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 ZHX2Q9Y6X8 837 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 TNKSO95271 1327 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 ORC4O43929 436 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 HUNKP57058 714 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 LONRF3Q496Y0 759 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 KIAA1755Q5JYT7 1200 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 DCAF15Q66K64 600 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 SYT10Q6XYQ8 523 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 NOSTRINQ8IVI9 506 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 ENAHQ8N8S7 591 aaPredicted RBP20.78■□□□□ 0.92
COL16A1-215ENST00000488897 RNF41Q9H4P4 317 aaPredicted RBP20.78■□□□□ 0.92
COL16A1-215ENST00000488897 TAOK2Q9UL54 1235 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 SNCAIPQ9Y6H5 919 aa20.78■□□□□ 0.92
COL16A1-215ENST00000488897 NID2Q14112 1375 aa20.77■□□□□ 0.92
COL16A1-215ENST00000488897 EEF2P13639 858 aaKnown RBP20.77■□□□□ 0.92
COL16A1-215ENST00000488897 KMT5BQ4FZB7 885 aa20.77■□□□□ 0.92
COL16A1-215ENST00000488897 RCSD1Q6JBY9 416 aa20.77■□□□□ 0.92
COL16A1-215ENST00000488897 VSTM4Q8IW00 320 aa20.77■□□□□ 0.92
COL16A1-215ENST00000488897 SWAP70Q9UH65 585 aa20.77■□□□□ 0.92
COL16A1-215ENST00000488897 ABT1Q9ULW3 272 aaKnown RBP20.77■□□□□ 0.92
COL16A1-215ENST00000488897 MAP3K9P80192 1104 aa20.77■□□□□ 0.92
COL16A1-215ENST00000488897 SAMD1Q6SPF0 538 aaPredicted RBP20.77■□□□□ 0.92
COL16A1-215ENST00000488897 PCDHA5Q9Y5H7 936 aa20.77■□□□□ 0.92
COL16A1-215ENST00000488897 ELF2Q15723 593 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms