RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 ZNF589Q86UQ0 364 aaPredicted RBP15.44■□□□□ 0.06
ATPAF2-207ENST00000488753 DCAF4Q8WV16 495 aa15.44■□□□□ 0.06
ATPAF2-207ENST00000488753 RILPL2Q969X0 211 aa15.44■□□□□ 0.06
ATPAF2-207ENST00000488753 LRCH3Q96II8 777 aa15.44■□□□□ 0.06
ATPAF2-207ENST00000488753 ABHD16BQ9H3Z7 469 aa15.44■□□□□ 0.06
ATPAF2-207ENST00000488753 ATP11BQ9Y2G3 1177 aa15.44■□□□□ 0.06
ATPAF2-207ENST00000488753 TACC3Q9Y6A5 838 aa15.44■□□□□ 0.06
ATPAF2-207ENST00000488753 ZNF536O15090 1300 aa15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 ADAMTS4O75173 837 aa15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 DUSP11O75319 330 aaKnown RBP15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 PGK1P00558 417 aa15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 IGHDP01880 384 aa15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 TOP1P11387 765 aaKnown RBP15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 TRIM60Q495X7 471 aa15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 B4GALNT3Q6L9W6 998 aa15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 PLEKHM2Q8IWE5 1019 aa15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 FGD4Q96M96 766 aa15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 TOMM22Q9NS69 142 aa15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 RNF146Q9NTX7 359 aa15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
ATPAF2-207ENST00000488753 MOXD2PA6NHM9 499 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 SDSP20132 328 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 CST5P28325 142 aaPredicted RBP15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 ACVR2BQ13705 512 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 AKNAD1Q5T1N1 836 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 BTNL9Q6UXG8 535 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 KCTD1Q719H9 257 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 FAM133AQ8N9E0 248 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 EXOC6Q8TAG9 804 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 FERMT2Q96AC1 680 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 AGBL1Q96MI9 1066 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 TTC14Q96N46 770 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 RNF41Q9H4P4 317 aaPredicted RBP15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 A1CFQ9NQ94 594 aaKnown RBP15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 HOMER2Q9NSB8 354 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 ZHX1Q9UKY1 873 aaPredicted RBP15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 PRR12Q9ULL5 1215 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 ZNFX1Q9P2E3 1918 aaKnown RBP15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 SYNRGQ9UMZ2 1314 aa15.42■□□□□ 0.06
ATPAF2-207ENST00000488753 A0A1W2PQ45 241 aaPredicted RBP15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 A0A1W2PQY0 241 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 POTEB2H3BUK9 544 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 HIP1O00291 1037 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 RRP12Q5JTH9 1297 aaKnown RBP15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 MFSD6Q6ZSS7 791 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 ARMCX2Q7L311 632 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 KLHDC9Q8NEP7 349 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 NUP133Q8WUM0 1156 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 TRERF1Q96PN7 1200 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 TMEM47Q9BQJ4 181 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 PDLIM7Q9NR12 457 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 PNMA2Q9UL42 364 aa15.41■□□□□ 0.06
ATPAF2-207ENST00000488753 PLXNA1Q9UIW2 1896 aa15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 ASB14A6NK59 587 aa15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 ICAM1P05362 532 aa15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 ALAS1P13196 640 aa15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 ACLYP53396 1101 aa15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 CCDC96Q2M329 555 aa15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 CCDC144BQ3MJ40 725 aa15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 CCSAPQ6IQ19 270 aaPredicted RBP15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 CCDC144CPQ8IYA2 1237 aa15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 LENG1Q96BZ8 264 aaPredicted RBP15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 UPF3AQ9H1J1 476 aaKnown RBP15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 RANBP17Q9H2T7 1088 aaKnown RBP15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 SPC25Q9HBM1 224 aa15.4■□□□□ 0.06
ATPAF2-207ENST00000488753 HAND2P61296 217 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 NKX3-2P78367 333 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 CNTN2Q02246 1040 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 TLE2Q04725 743 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 CCDC174Q6PII3 467 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 ANKRD33Q7Z3H0 272 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 TBC1D10CQ8IV04 446 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 PCSK9Q8NBP7 692 aaKnown RBP15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 ESR2Q92731 530 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 TOX2Q96NM4 488 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 KATNBL1Q9H079 304 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 PRDM5Q9NQX1 630 aaPredicted RBP15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 DIAPH3Q9NSV4 1193 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 CYP39A1Q9NYL5 469 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 CCPG1Q9ULG6 757 aa15.39■□□□□ 0.05
ATPAF2-207ENST00000488753 SOWAHBA6NEL2 793 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 ZNF213O14771 459 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 CLTBP09497 229 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 PDHBP11177 359 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 GJA9P57773 515 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 KCNA10Q16322 511 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 SYDE2Q5VT97 1194 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 RASGRP2Q7LDG7 609 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 CHMP4CQ96CF2 233 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 GLT1D1Q96MS3 346 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 STARD7Q9NQZ5 370 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 MTMR7Q9Y216 660 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 ELP1O95163 1332 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 SMCHD1A6NHR9 2005 aa15.38■□□□□ 0.05
ATPAF2-207ENST00000488753 LOC102724159A0A0B4J2E5 919 aa15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 TRIM43BA6NCK2 446 aa15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 KIAA0355O15063 1070 aa15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 C6orf222P0C671 652 aaPredicted RBP15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 SNHG28P0DPA3 235 aa15.37■□□□□ 0.05
ATPAF2-207ENST00000488753 PWP2Q15269 919 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms