RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 TYW1Q9NV66 732 aaKnown RBP6.31□□□□□ -1.4
VPS13A-211ENST00000484581 TJP2Q9UDY2 1190 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 CORINQ9Y5Q5 1042 aa6.31□□□□□ -1.4
VPS13A-211ENST00000484581 NCANO14594 1321 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 DNAJC25-GNG10A0A024R161 153 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 ASMTLO95671 621 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 ZSCAN22P10073 491 aaPredicted RBP6.3□□□□□ -1.4
VPS13A-211ENST00000484581 NME1P15531 152 aaKnown RBP6.3□□□□□ -1.4
VPS13A-211ENST00000484581 HK2P52789 917 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 PLEKHG6Q3KR16 790 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 ZC3H12BQ5HYM0 836 aaKnown RBP6.3□□□□□ -1.4
VPS13A-211ENST00000484581 TMEM201Q5SNT2 666 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 CDCP2Q5VXM1 449 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 LILRA6Q6PI73 481 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 VHLLQ6RSH7 139 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 UNC5AQ6ZN44 842 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 MRPL41Q8IXM3 137 aaKnown RBP6.3□□□□□ -1.4
VPS13A-211ENST00000484581 TMEM87BQ96K49 555 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 DPH2Q9BQC3 489 aaPredicted RBP6.3□□□□□ -1.4
VPS13A-211ENST00000484581 IRF2BPLQ9H1B7 796 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 TRIT1Q9H3H1 467 aaKnown RBP6.3□□□□□ -1.4
VPS13A-211ENST00000484581 CNNM2Q9H8M5 875 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 DDX56Q9NY93 547 aaKnown RBP6.3□□□□□ -1.4
VPS13A-211ENST00000484581 TMEM59LQ9UK28 342 aa6.3□□□□□ -1.4
VPS13A-211ENST00000484581 PRRG2O14669 202 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 SUSD5O60279 629 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 ESR1P03372 595 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 ACRP10323 421 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 PLCG1P19174 1290 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 SLC10A6Q3KNW5 377 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 DALRD3Q5D0E6 543 aaKnown RBP6.29□□□□□ -1.4
VPS13A-211ENST00000484581 RALGPS1Q5JS13 557 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 KRT26Q7Z3Y9 468 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 LRRC47Q8N1G4 583 aaKnown RBP6.29□□□□□ -1.4
VPS13A-211ENST00000484581 ATG4CQ96DT6 458 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 ADAMTS10Q9H324 1103 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 GPATCH2Q9NW75 528 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 ADAM30Q9UKF2 790 aa6.29□□□□□ -1.4
VPS13A-211ENST00000484581 LTBP3Q9NS15 1303 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 IQCA1LA6NCM1 817 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 SLC22A31A6NKX4 558 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 NPIPB6E9PJ23 425 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 TPP2P29144 1249 aaPredicted RBP6.28□□□□□ -1.4
VPS13A-211ENST00000484581 ZYXQ15942 572 aaKnown RBP6.28□□□□□ -1.4
VPS13A-211ENST00000484581 CCDC181Q5TID7 509 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 LCNL1Q6ZST4 164 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 C1QL4Q86Z23 238 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 MCATQ8IVS2 390 aaKnown RBP6.28□□□□□ -1.4
VPS13A-211ENST00000484581 KCNN1Q92952 543 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 SYTL4Q96C24 671 aaPredicted RBP6.28□□□□□ -1.4
VPS13A-211ENST00000484581 SLC26A8Q96RN1 970 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 SPATA9Q9BWV2 254 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 KCNH3Q9ULD8 1083 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 CEP131Q9UPN4 1083 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 CD2APQ9Y5K6 639 aa6.28□□□□□ -1.4
VPS13A-211ENST00000484581 CCDC163A0A0D9SF12 145 aa6.27□□□□□ -1.41
VPS13A-211ENST00000484581 TCAF2A6NFQ2 919 aa6.27□□□□□ -1.41
VPS13A-211ENST00000484581 ADCY3O60266 1144 aa6.27□□□□□ -1.41
VPS13A-211ENST00000484581 DNAJA2O60884 412 aa6.27□□□□□ -1.41
VPS13A-211ENST00000484581 ERVFC1P60507 584 aa6.27□□□□□ -1.41
VPS13A-211ENST00000484581 ATG14Q6ZNE5 492 aa6.27□□□□□ -1.41
VPS13A-211ENST00000484581 STAG1Q8WVM7 1258 aa6.27□□□□□ -1.41
VPS13A-211ENST00000484581 KLHL6Q8WZ60 621 aa6.27□□□□□ -1.41
VPS13A-211ENST00000484581 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.41
VPS13A-211ENST00000484581 KCNK12Q9HB15 430 aa6.27□□□□□ -1.41
VPS13A-211ENST00000484581 WASH4PA8MWX3 477 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 HPXP02790 462 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 KRT1P04264 644 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 S100BP04271 92 aaPredicted RBP6.26□□□□□ -1.41
VPS13A-211ENST00000484581 PDGFRBP09619 1106 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 FAM153BP0C7A2 387 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 KCNA10Q16322 511 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 TM4SF20Q53R12 229 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 CIAPIN1Q6FI81 312 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 ZBTB38Q8NAP3 1195 aaPredicted RBP6.26□□□□□ -1.41
VPS13A-211ENST00000484581 NINJ1Q92982 152 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 MFSD3Q96ES6 412 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 SGSM3Q96HU1 749 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 SLC9A7Q96T83 725 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 DUSP15Q9H1R2 295 aaPredicted RBP6.26□□□□□ -1.41
VPS13A-211ENST00000484581 KLHL3Q9UH77 587 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 DUSP13Q9UII6 198 aa6.26□□□□□ -1.41
VPS13A-211ENST00000484581 B8ZZF3 427 aa6.25□□□□□ -1.41
VPS13A-211ENST00000484581 RBAK-RBAKDNI3L0D1 243 aa6.25□□□□□ -1.41
VPS13A-211ENST00000484581 PARNO95453 639 aaKnown RBP6.25□□□□□ -1.41
VPS13A-211ENST00000484581 NAT2P11245 290 aa6.25□□□□□ -1.41
VPS13A-211ENST00000484581 CCNFP41002 786 aa6.25□□□□□ -1.41
VPS13A-211ENST00000484581 ZNF143P52747 638 aaPredicted RBP6.25□□□□□ -1.41
VPS13A-211ENST00000484581 SLC7A5Q01650 507 aa6.25□□□□□ -1.41
VPS13A-211ENST00000484581 EGR3Q06889 387 aa6.25□□□□□ -1.41
VPS13A-211ENST00000484581 KIAA1211LQ6NV74 962 aa6.25□□□□□ -1.41
VPS13A-211ENST00000484581 OXR1Q8N573 874 aa6.25□□□□□ -1.41
VPS13A-211ENST00000484581 DNAJB8Q8NHS0 232 aa6.25□□□□□ -1.41
VPS13A-211ENST00000484581 Q96M66 194 aa6.25□□□□□ -1.41
VPS13A-211ENST00000484581 ZNF214Q9UL59 606 aaPredicted RBP6.25□□□□□ -1.41
VPS13A-211ENST00000484581 ETV2O00321 342 aaPredicted RBP6.24□□□□□ -1.41
VPS13A-211ENST00000484581 RFPL3O75679 317 aa6.24□□□□□ -1.41
VPS13A-211ENST00000484581 RAG1P15918 1043 aa6.24□□□□□ -1.41
VPS13A-211ENST00000484581 LTKP29376 864 aa6.24□□□□□ -1.41
VPS13A-211ENST00000484581 TRHRP34981 398 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms