RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 PDE4AP27815 886 aa13.17□□□□□ -0.3
SORT1-204ENST00000482236 TKFCQ3LXA3 575 aa13.17□□□□□ -0.3
SORT1-204ENST00000482236 RASGRP2Q7LDG7 609 aa13.17□□□□□ -0.3
SORT1-204ENST00000482236 UBE2Q1Q7Z7E8 422 aa13.17□□□□□ -0.3
SORT1-204ENST00000482236 RNF180Q86T96 592 aa13.17□□□□□ -0.3
SORT1-204ENST00000482236 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
SORT1-204ENST00000482236 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
SORT1-204ENST00000482236 MPHOSPH6Q99547 160 aaKnown RBP13.17□□□□□ -0.3
SORT1-204ENST00000482236 PRDM5Q9NQX1 630 aaPredicted RBP13.17□□□□□ -0.3
SORT1-204ENST00000482236 NRBP1Q9UHY1 535 aa13.17□□□□□ -0.3
SORT1-204ENST00000482236 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
SORT1-204ENST00000482236 ATP11BQ9Y2G3 1177 aa13.17□□□□□ -0.3
SORT1-204ENST00000482236 DIS3Q9Y2L1 958 aaKnown RBP13.17□□□□□ -0.3
SORT1-204ENST00000482236 PTPDC1A2A3K4 754 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 ATP2A1O14983 1001 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 GSPT1P15170 499 aaKnown RBP13.16□□□□□ -0.3
SORT1-204ENST00000482236 NT5C2P49902 561 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 SART3Q15020 963 aaKnown RBP13.16□□□□□ -0.3
SORT1-204ENST00000482236 ZNF792Q3KQV3 632 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 LHX8Q68G74 356 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 CASC1Q6TDU7 716 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 TRPV1Q8NER1 839 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 VTI1AQ96AJ9 217 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 TTC14Q96N46 770 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 LBHD1Q9BQE6 289 aaPredicted RBP13.16□□□□□ -0.3
SORT1-204ENST00000482236 TCP11L1Q9NUJ3 509 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 PNMA2Q9UL42 364 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 FAM184BQ9ULE4 1060 aa13.16□□□□□ -0.3
SORT1-204ENST00000482236 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
SORT1-204ENST00000482236 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
SORT1-204ENST00000482236 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
SORT1-204ENST00000482236 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
SORT1-204ENST00000482236 PNMA1Q8ND90 353 aa13.15□□□□□ -0.3
SORT1-204ENST00000482236 FERMT2Q96AC1 680 aa13.15□□□□□ -0.3
SORT1-204ENST00000482236 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
SORT1-204ENST00000482236 TNKSO95271 1327 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 SYNGAP1Q96PV0 1343 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 ASB14A6NK59 587 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 PLA2G6O60733 806 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 PGK1P00558 417 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 ICAM1P05362 532 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 GOLGA8HP0CJ92 632 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 PDHBP11177 359 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 USH1GQ495M9 461 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
SORT1-204ENST00000482236 TTBK2Q6IQ55 1244 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 ARMCX2Q7L311 632 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.14□□□□□ -0.31
SORT1-204ENST00000482236 TACC3Q9Y6A5 838 aa13.14□□□□□ -0.31
SORT1-204ENST00000482236 PARP14Q460N5 1801 aa13.13□□□□□ -0.31
SORT1-204ENST00000482236 RLFQ13129 1914 aa13.13□□□□□ -0.31
SORT1-204ENST00000482236 FGRP09769 529 aa13.13□□□□□ -0.31
SORT1-204ENST00000482236 PARP1P09874 1014 aaKnown RBP13.13□□□□□ -0.31
SORT1-204ENST00000482236 C6orf222P0C671 652 aaPredicted RBP13.13□□□□□ -0.31
SORT1-204ENST00000482236 TAL1P17542 331 aaPredicted RBP13.13□□□□□ -0.31
SORT1-204ENST00000482236 CHMLP26374 656 aa13.13□□□□□ -0.31
SORT1-204ENST00000482236 CALML3P27482 149 aa13.13□□□□□ -0.31
SORT1-204ENST00000482236 ADCYAP1R1P41586 468 aa13.13□□□□□ -0.31
SORT1-204ENST00000482236 RTP1P59025 263 aa13.13□□□□□ -0.31
SORT1-204ENST00000482236 ZNF543Q08ER8 600 aa13.13□□□□□ -0.31
SORT1-204ENST00000482236 LRRC26Q2I0M4 334 aa13.13□□□□□ -0.31
SORT1-204ENST00000482236 CENPQQ7L2Z9 268 aaPredicted RBP13.13□□□□□ -0.31
SORT1-204ENST00000482236 LENG1Q96BZ8 264 aaPredicted RBP13.13□□□□□ -0.31
SORT1-204ENST00000482236 UBE2OQ9C0C9 1292 aaKnown RBP13.13□□□□□ -0.31
SORT1-204ENST00000482236 ABHD16BQ9H3Z7 469 aa13.13□□□□□ -0.31
SORT1-204ENST00000482236 A1CFQ9NQ94 594 aaKnown RBP13.13□□□□□ -0.31
SORT1-204ENST00000482236 ADD3Q9UEY8 706 aaKnown RBP13.13□□□□□ -0.31
SORT1-204ENST00000482236 CNTN2Q02246 1040 aa13.12□□□□□ -0.31
SORT1-204ENST00000482236 ACVR2BQ13705 512 aa13.12□□□□□ -0.31
SORT1-204ENST00000482236 LRRC41Q15345 812 aa13.12□□□□□ -0.31
SORT1-204ENST00000482236 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
SORT1-204ENST00000482236 EEPD1Q7L9B9 569 aa13.12□□□□□ -0.31
SORT1-204ENST00000482236 ZNF467Q7Z7K2 595 aaPredicted RBP13.12□□□□□ -0.31
SORT1-204ENST00000482236 CCDC144CPQ8IYA2 1237 aa13.12□□□□□ -0.31
SORT1-204ENST00000482236 CCDC136Q96JN2 1154 aa13.12□□□□□ -0.31
SORT1-204ENST00000482236 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
SORT1-204ENST00000482236 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
SORT1-204ENST00000482236 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
SORT1-204ENST00000482236 BRCA2P51587 3418 aa13.12□□□□□ -0.31
SORT1-204ENST00000482236 B4DLN1 442 aa13.11□□□□□ -0.31
SORT1-204ENST00000482236 IFIT3O14879 490 aaKnown RBP13.11□□□□□ -0.31
SORT1-204ENST00000482236 COL6A1P12109 1028 aa13.11□□□□□ -0.31
SORT1-204ENST00000482236 MRPL12P52815 198 aaKnown RBP13.11□□□□□ -0.31
SORT1-204ENST00000482236 MDM2Q00987 491 aaPredicted RBP13.11□□□□□ -0.31
SORT1-204ENST00000482236 CDC37Q16543 378 aaPredicted RBP13.11□□□□□ -0.31
SORT1-204ENST00000482236 MUM1L1Q5H9M0 696 aa13.11□□□□□ -0.31
SORT1-204ENST00000482236 RNF207Q6ZRF8 634 aa13.11□□□□□ -0.31
SORT1-204ENST00000482236 NCOA7Q8NI08 942 aa13.11□□□□□ -0.31
SORT1-204ENST00000482236 NUP133Q8WUM0 1156 aa13.11□□□□□ -0.31
SORT1-204ENST00000482236 UBA5Q9GZZ9 404 aa13.11□□□□□ -0.31
SORT1-204ENST00000482236 AP5M1Q9H0R1 490 aa13.11□□□□□ -0.31
SORT1-204ENST00000482236 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
SORT1-204ENST00000482236 STARD7Q9NQZ5 370 aa13.11□□□□□ -0.31
SORT1-204ENST00000482236 DNAJC25-GNG10A0A024R161 153 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 PQBP1O60828 265 aaKnown RBP13.1□□□□□ -0.31
SORT1-204ENST00000482236 SLC34A2O95436 690 aa13.1□□□□□ -0.31
SORT1-204ENST00000482236 ZNF865P0CJ78 1059 aaPredicted RBP13.1□□□□□ -0.31
SORT1-204ENST00000482236 MAGEA10P43363 369 aaPredicted RBP13.1□□□□□ -0.31
SORT1-204ENST00000482236 MNX1P50219 401 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms