RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SYDE2Q5VT97 1194 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 SHISA2Q6UWI4 295 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 CDC37L1Q7L3B6 337 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 C7orf61Q8IZ16 206 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 ARHGEF39Q8N4T4 335 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 SAMD3Q8N6K7 520 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 KCT2Q8NC54 265 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 ADCY4Q8NFM4 1077 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 OR2W6PQ8NHA6 318 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 KCTD13Q8WZ19 329 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 GP6Q9HCN6 339 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 CHST12Q9NRB3 414 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 DISC1Q9NRI5 854 aa6.94□□□□□ -1.3
COPA-203ENST00000481040 GOLGA6CA6NDK9 693 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 GOLGA6BA6NDN3 693 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 B4E1Z4 1266 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 SHOXO15266 292 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 KCNH1O95259 989 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 GOLGA6DP0CG33 693 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 PYGMP11217 842 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 ITGA4P13612 1032 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 ID4P47928 161 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 GFRA1P56159 465 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 MAP4K2Q12851 820 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 AUHQ13825 339 aaKnown RBP6.93□□□□□ -1.3
COPA-203ENST00000481040 BRD3Q15059 726 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 SF1Q15637 639 aaKnown RBP6.93□□□□□ -1.3
COPA-203ENST00000481040 NTRK3Q16288 839 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 EXOSC6Q5RKV6 272 aaKnown RBP6.93□□□□□ -1.3
COPA-203ENST00000481040 TRAPPC3LQ5T215 181 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 NBPF12Q5TAG4 269 aaPredicted RBP6.93□□□□□ -1.3
COPA-203ENST00000481040 PRAMEF13Q5VWM6 474 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 MSL1Q68DK7 614 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 SLC4A10Q6U841 1118 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 MAMDC2Q7Z304 686 aaPredicted RBP6.93□□□□□ -1.3
COPA-203ENST00000481040 UBE3DQ7Z6J8 389 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 FANCD2OSQ96PS1 177 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.93□□□□□ -1.3
COPA-203ENST00000481040 GOLGA6AQ9NYA3 693 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 CGGBP1Q9UFW8 167 aaPredicted RBP6.93□□□□□ -1.3
COPA-203ENST00000481040 APOBEC2Q9Y235 224 aaKnown RBP6.93□□□□□ -1.3
COPA-203ENST00000481040 TNKSO95271 1327 aa6.93□□□□□ -1.3
COPA-203ENST00000481040 PRPF3O43395 683 aaKnown RBP6.92□□□□□ -1.3
COPA-203ENST00000481040 DYRK3O43781 588 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 RFPL1O75677 317 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 ABLIM3O94929 683 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 LDHAP00338 332 aaKnown RBP6.92□□□□□ -1.3
COPA-203ENST00000481040 SCNN1BP51168 640 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 MBTPS1Q14703 1052 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 PIK3R6Q5UE93 754 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 GTF2IRD2BQ6EKJ0 949 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 KSR2Q6VAB6 950 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 GTF2IRD2Q86UP8 949 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 MAP4K3Q8IVH8 894 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 MAGEB6Q8N7X4 407 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 BRF1Q92994 677 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 ZNF700Q9H0M5 742 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 ATXN3LQ9H3M9 355 aa6.92□□□□□ -1.3
COPA-203ENST00000481040 A0A087WZG4 1122 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 FBXO21O94952 628 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 NEFMP07197 916 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 ZSCAN20P17040 1043 aaPredicted RBP6.91□□□□□ -1.3
COPA-203ENST00000481040 HOXC12P31275 282 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 CD68P34810 354 aaPredicted RBP6.91□□□□□ -1.3
COPA-203ENST00000481040 KCNJ6P48051 423 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 SAFB2Q14151 953 aaKnown RBP eCLIP6.91□□□□□ -1.3
COPA-203ENST00000481040 ADGRE1Q14246 886 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 TTLL4Q14679 1199 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 GFOD2Q3B7J2 385 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 C4orf46Q504U0 113 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 ZCCHC8Q6NZY4 707 aaKnown RBP6.91□□□□□ -1.3
COPA-203ENST00000481040 ANKLE2Q86XL3 938 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 TMEM145Q8NBT3 493 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 XAGE3Q8WTP9 111 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 PPP1R13LQ8WUF5 828 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 JPH3Q8WXH2 748 aaPredicted RBP6.91□□□□□ -1.3
COPA-203ENST00000481040 WNK4Q96J92 1243 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 CCDC140Q96MF4 163 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 ORAI3Q9BRQ5 295 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 RHOBTB2Q9BYZ6 727 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 CRTAC1Q9NQ79 661 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 KCNK4Q9NYG8 393 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 TRAF6Q9Y4K3 522 aa6.91□□□□□ -1.3
COPA-203ENST00000481040 M0R2C6 588 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 CRTAMO95727 393 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 SNRPB2P08579 225 aaKnown RBP6.9□□□□□ -1.3
COPA-203ENST00000481040 ZNF445P59923 1031 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 RNF4P78317 190 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 GRB10Q13322 594 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 VPS72Q15906 364 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 SKOR2Q2VWA4 1001 aaPredicted RBP6.9□□□□□ -1.3
COPA-203ENST00000481040 APBB1IPQ7Z5R6 666 aaPredicted RBP6.9□□□□□ -1.3
COPA-203ENST00000481040 KIF18BQ86Y91 864 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 DMRTC2Q8IXT2 367 aaPredicted RBP6.9□□□□□ -1.3
COPA-203ENST00000481040 EVI5LQ96CN4 794 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 VWCEQ96DN2 955 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 FOXQ1Q9C009 403 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 NKX2-4Q9H2Z4 354 aa6.9□□□□□ -1.3
COPA-203ENST00000481040 LUC7LQ9NQ29 371 aaKnown RBP6.9□□□□□ -1.3
COPA-203ENST00000481040 AP4E1Q9UPM8 1137 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms