RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 GBF1Q92538 1859 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 IGKV6D-41A0A0C4DH26 115 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 TRIM43BA6NCK2 446 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 SEPT4O43236 478 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 STRNO43815 780 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 PCP11498 1178 aaKnown RBP10.64□□□□□ -0.71
VCP-206ENST00000480327 ITGB8P26012 769 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 SHHQ15465 462 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 ADCK5Q3MIX3 580 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 TRIM60Q495X7 471 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 LRRC47Q8N1G4 583 aaKnown RBP10.64□□□□□ -0.71
VCP-206ENST00000480327 REPS2Q8NFH8 660 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 TRIM43Q96BQ3 446 aaPredicted RBP10.64□□□□□ -0.71
VCP-206ENST00000480327 FAM161BQ96MY7 647 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 VCPKMTQ9H867 229 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 PDLIM7Q9NR12 457 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 MTMR4Q9NYA4 1195 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 STX8Q9UNK0 236 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 MTMR7Q9Y216 660 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 ATP11BQ9Y2G3 1177 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 SNX14Q9Y5W7 946 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 LCTP09848 1927 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 LRRC37A2A6NM11 1700 aa10.64□□□□□ -0.71
VCP-206ENST00000480327 FLOT1O75955 427 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 TTLL1O95922 423 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 CPA1P15085 419 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 TAL1P17542 331 aaPredicted RBP10.63□□□□□ -0.71
VCP-206ENST00000480327 MCCP23508 829 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 ADCYAP1R1P41586 468 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 LRRC41Q15345 812 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 NCAPG2Q86XI2 1143 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 ABRAQ8N0Z2 381 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 BADQ92934 168 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 FERMT2Q96AC1 680 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 COL25A1Q9BXS0 654 aaPredicted RBP10.63□□□□□ -0.71
VCP-206ENST00000480327 MROH8Q9H579 483 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 NYAP2Q9P242 653 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 PLIN4Q96Q06 1357 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 MUC3AQ02505 3323 aa10.63□□□□□ -0.71
VCP-206ENST00000480327 IFIT3O14879 490 aaKnown RBP10.62□□□□□ -0.71
VCP-206ENST00000480327 WDR46O15213 610 aaKnown RBP10.62□□□□□ -0.71
VCP-206ENST00000480327 PRC1O43663 620 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 PGK2P07205 417 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 EPHB4P54760 987 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 ANTXR2P58335 489 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 PLS1Q14651 629 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 ZNF792Q3KQV3 632 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 SAMD1Q6SPF0 538 aaPredicted RBP10.62□□□□□ -0.71
VCP-206ENST00000480327 IQCA1Q86XH1 822 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 MB21D2Q8IYB1 491 aaPredicted RBP10.62□□□□□ -0.71
VCP-206ENST00000480327 MB21D1Q8N884 522 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 ARRDC4Q8NCT1 418 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 KCNB2Q92953 911 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 LENG1Q96BZ8 264 aaPredicted RBP10.62□□□□□ -0.71
VCP-206ENST00000480327 TCEANC2Q96MN5 208 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 JAKMIP1Q96N16 626 aaKnown RBP10.62□□□□□ -0.71
VCP-206ENST00000480327 NEK1Q96PY6 1258 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 ZSCAN10Q96SZ4 725 aaPredicted RBP10.62□□□□□ -0.71
VCP-206ENST00000480327 UBAC1Q9BSL1 405 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 LRRC2Q9BYS8 371 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 TTYH1Q9H313 450 aaPredicted RBP10.62□□□□□ -0.71
VCP-206ENST00000480327 TCP11L1Q9NUJ3 509 aa10.62□□□□□ -0.71
VCP-206ENST00000480327 ZNF214Q9UL59 606 aaPredicted RBP10.62□□□□□ -0.71
VCP-206ENST00000480327 ISY1Q9ULR0 285 aaKnown RBP10.62□□□□□ -0.71
VCP-206ENST00000480327 TNKSO95271 1327 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 CHD7Q9P2D1 2997 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 KBTBD13C9JR72 458 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 VWA5AO00534 786 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 EIF5BO60841 1220 aaKnown RBP10.61□□□□□ -0.71
VCP-206ENST00000480327 ZNF865P0CJ78 1059 aaPredicted RBP10.61□□□□□ -0.71
VCP-206ENST00000480327 KRT32Q14532 448 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 TSGA10IPQ3SY00 556 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 C1orf53Q5VUE5 145 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 RCSD1Q6JBY9 416 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 RASGRP2Q7LDG7 609 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 RIOX2Q8IUF8 465 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 ENAHQ8N8S7 591 aaPredicted RBP10.61□□□□□ -0.71
VCP-206ENST00000480327 NUP88Q99567 741 aaPredicted RBP10.61□□□□□ -0.71
VCP-206ENST00000480327 LBHD1Q9BQE6 289 aaPredicted RBP10.61□□□□□ -0.71
VCP-206ENST00000480327 TMEM47Q9BQJ4 181 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 SH2D4AQ9H788 454 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 GOPCQ9HD26 462 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 GPHNQ9NQX3 736 aaPredicted RBP10.61□□□□□ -0.71
VCP-206ENST00000480327 PHF24Q9UPV7 400 aa10.61□□□□□ -0.71
VCP-206ENST00000480327 ERICH2A1L162 156 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 F5H6K3 240 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 EPB41L2O43491 1005 aaKnown RBP10.6□□□□□ -0.71
VCP-206ENST00000480327 ADAMTS4O75173 837 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 NDUFB10O96000 172 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 PGK1P00558 417 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 MYCNP04198 464 aaPredicted RBP10.6□□□□□ -0.71
VCP-206ENST00000480327 TOP1P11387 765 aaKnown RBP10.6□□□□□ -0.71
VCP-206ENST00000480327 FCER1AP12319 257 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 CASTP20810 708 aaKnown RBP10.6□□□□□ -0.71
VCP-206ENST00000480327 MCM5P33992 734 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 IRX5P78411 483 aaPredicted RBP10.6□□□□□ -0.71
VCP-206ENST00000480327 TLE2Q04725 743 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 KLRC3Q07444 240 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 TMEM67Q5HYA8 995 aa10.6□□□□□ -0.71
VCP-206ENST00000480327 PPP4R3BQ5MIZ7 849 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms