RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 RAVER2Q9HCJ3 691 aaKnown RBP17.72■□□□□ 0.43
COL16A1-211ENST00000479100 MAD2L2Q9UI95 211 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 BRPF3Q9ULD4 1205 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 RLFQ13129 1914 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 ZSWIM8A7E2V4 1837 aa17.72■□□□□ 0.43
COL16A1-211ENST00000479100 PALM3A6NDB9 673 aaPredicted RBP17.71■□□□□ 0.43
COL16A1-211ENST00000479100 MYCP01106 439 aaPredicted RBP17.71■□□□□ 0.43
COL16A1-211ENST00000479100 FDX1P10109 184 aa17.71■□□□□ 0.43
COL16A1-211ENST00000479100 KIF5BP33176 963 aa17.71■□□□□ 0.43
COL16A1-211ENST00000479100 STAT3P40763 770 aa17.71■□□□□ 0.43
COL16A1-211ENST00000479100 MTFR1Q15390 333 aa17.71■□□□□ 0.43
COL16A1-211ENST00000479100 SNRNP48Q6IEG0 339 aaKnown RBP17.71■□□□□ 0.43
COL16A1-211ENST00000479100 APOA5Q6Q788 366 aa17.71■□□□□ 0.43
COL16A1-211ENST00000479100 REPS2Q8NFH8 660 aa17.71■□□□□ 0.43
COL16A1-211ENST00000479100 GOLGA8BA8MQT2 603 aa17.7■□□□□ 0.42
COL16A1-211ENST00000479100 ZBTB43O43298 467 aa17.7■□□□□ 0.42
COL16A1-211ENST00000479100 MAPK4P31152 587 aa17.7■□□□□ 0.42
COL16A1-211ENST00000479100 GRK4P32298 578 aa17.7■□□□□ 0.42
COL16A1-211ENST00000479100 ADGRF4Q8IZF3 695 aa17.7■□□□□ 0.42
COL16A1-211ENST00000479100 RAET1EQ8TD07 263 aa17.7■□□□□ 0.42
COL16A1-211ENST00000479100 COA7Q96BR5 231 aa17.7■□□□□ 0.42
COL16A1-211ENST00000479100 LARP6Q9BRS8 491 aaKnown RBP17.7■□□□□ 0.42
COL16A1-211ENST00000479100 TEX13BQ9BXU2 312 aa17.7■□□□□ 0.42
COL16A1-211ENST00000479100 ZNF214Q9UL59 606 aaPredicted RBP17.7■□□□□ 0.42
COL16A1-211ENST00000479100 GABRQQ9UN88 632 aa17.7■□□□□ 0.42
COL16A1-211ENST00000479100 RBBP6Q7Z6E9 1792 aaKnown RBP17.69■□□□□ 0.42
COL16A1-211ENST00000479100 GOLGA8AA7E2F4 631 aa17.69■□□□□ 0.42
COL16A1-211ENST00000479100 ERCC3P19447 782 aa17.69■□□□□ 0.42
COL16A1-211ENST00000479100 PLEKHH3Q7Z736 793 aa17.69■□□□□ 0.42
COL16A1-211ENST00000479100 FANCBQ8NB91 859 aa17.69■□□□□ 0.42
COL16A1-211ENST00000479100 PIBF1Q8WXW3 757 aa17.69■□□□□ 0.42
COL16A1-211ENST00000479100 SHISA4Q96DD7 197 aa17.69■□□□□ 0.42
COL16A1-211ENST00000479100 AGBL1Q96MI9 1066 aa17.69■□□□□ 0.42
COL16A1-211ENST00000479100 MAP3K14Q99558 947 aa17.69■□□□□ 0.42
COL16A1-211ENST00000479100 RANBP17Q9H2T7 1088 aaKnown RBP17.69■□□□□ 0.42
COL16A1-211ENST00000479100 HOMER2Q9NSB8 354 aa17.69■□□□□ 0.42
COL16A1-211ENST00000479100 PARP14Q460N5 1801 aa17.69■□□□□ 0.42
COL16A1-211ENST00000479100 SLC25A27O95847 323 aa17.68■□□□□ 0.42
COL16A1-211ENST00000479100 RBM25P49756 843 aaKnown RBP17.68■□□□□ 0.42
COL16A1-211ENST00000479100 GNAQP50148 359 aa17.68■□□□□ 0.42
COL16A1-211ENST00000479100 NEK4P51957 841 aa17.68■□□□□ 0.42
COL16A1-211ENST00000479100 OAZ1P54368 228 aa17.68■□□□□ 0.42
COL16A1-211ENST00000479100 TOB2Q14106 344 aaPredicted RBP17.68■□□□□ 0.42
COL16A1-211ENST00000479100 GPR142Q7Z601 462 aa17.68■□□□□ 0.42
COL16A1-211ENST00000479100 RIOX2Q8IUF8 465 aa17.68■□□□□ 0.42
COL16A1-211ENST00000479100 MROH8Q9H579 483 aa17.68■□□□□ 0.42
COL16A1-211ENST00000479100 CCPG1Q9ULG6 757 aa17.68■□□□□ 0.42
COL16A1-211ENST00000479100 IVNS1ABPQ9Y6Y0 642 aa17.68■□□□□ 0.42
COL16A1-211ENST00000479100 A0A0G2JMZ2 1700 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 PLEKHA8P1O95397 391 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 ALAS1P13196 640 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 FLT3LGP49771 235 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 METAP2P50579 478 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL16A1-211ENST00000479100 CDC37Q16543 378 aaPredicted RBP17.67■□□□□ 0.42
COL16A1-211ENST00000479100 RTN1Q16799 776 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 NOL8Q76FK4 1167 aaKnown RBP17.67■□□□□ 0.42
COL16A1-211ENST00000479100 CMTR1Q8N1G2 835 aaKnown RBP17.67■□□□□ 0.42
COL16A1-211ENST00000479100 FBXL16Q8N461 479 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 CCDC82Q8N4S0 544 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 SHCBP1Q8NEM2 672 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 IL17RAQ96F46 866 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 LZTS2Q9BRK4 669 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 AGXT2Q9BYV1 514 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 JMJD4Q9H9V9 463 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 RIPK3Q9Y572 518 aa17.67■□□□□ 0.42
COL16A1-211ENST00000479100 COL11A1P12107 1806 aaPredicted RBP17.67■□□□□ 0.42
COL16A1-211ENST00000479100 ATP2A1O14983 1001 aa17.66■□□□□ 0.42
COL16A1-211ENST00000479100 TAL1P17542 331 aaPredicted RBP17.66■□□□□ 0.42
COL16A1-211ENST00000479100 COPB2P35606 906 aa17.66■□□□□ 0.42
COL16A1-211ENST00000479100 AK2P54819 239 aa17.66■□□□□ 0.42
COL16A1-211ENST00000479100 IRF5Q13568 498 aa17.66■□□□□ 0.42
COL16A1-211ENST00000479100 UBE2Q1Q7Z7E8 422 aa17.66■□□□□ 0.42
COL16A1-211ENST00000479100 HOMER1Q86YM7 354 aa17.66■□□□□ 0.42
COL16A1-211ENST00000479100 SLAIN1Q8ND83 568 aa17.66■□□□□ 0.42
COL16A1-211ENST00000479100 RBM28Q9NW13 759 aaKnown RBP17.66■□□□□ 0.42
COL16A1-211ENST00000479100 ZNF536O15090 1300 aa17.66■□□□□ 0.42
COL16A1-211ENST00000479100 ICAM1P05362 532 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 GJB1P08034 283 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 PTPREP23469 700 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 PDIA3P30101 505 aaKnown RBP17.65■□□□□ 0.42
COL16A1-211ENST00000479100 GJA8P48165 433 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 STK3Q13188 491 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 ANKRD1Q15327 319 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 SLC35G1Q2M3R5 365 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 QRICH1Q2TAL8 776 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 USH1GQ495M9 461 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 SRBD1Q8N5C6 995 aaKnown RBP17.65■□□□□ 0.42
COL16A1-211ENST00000479100 PXYLP1Q8TE99 480 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 TBC1D32Q96NH3 1257 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 PIGSQ96S52 555 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 MMP19Q99542 508 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 NUDT12Q9BQG2 462 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 RNF146Q9NTX7 359 aa17.65■□□□□ 0.42
COL16A1-211ENST00000479100 SLC15A5A6NIM6 579 aa17.64■□□□□ 0.41
COL16A1-211ENST00000479100 CYTH3O43739 400 aa17.64■□□□□ 0.41
COL16A1-211ENST00000479100 FCER1AP12319 257 aa17.64■□□□□ 0.41
COL16A1-211ENST00000479100 CCL5P13501 91 aa17.64■□□□□ 0.41
COL16A1-211ENST00000479100 CCT2P78371 535 aaKnown RBP17.64■□□□□ 0.41
COL16A1-211ENST00000479100 KCTD2Q14681 263 aa17.64■□□□□ 0.41
COL16A1-211ENST00000479100 TKFCQ3LXA3 575 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms