RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 HORMAD1Q86X24 394 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 HS6ST3Q8IZP7 471 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 PLEKHG3A1L390 1219 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 HGSO14964 777 aaPredicted RBP5.91□□□□□ -1.46
USF3-202ENST00000478658 ORC4O43929 436 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 URI1O94763 535 aaPredicted RBP5.91□□□□□ -1.46
USF3-202ENST00000478658 MYO1DO94832 1006 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 HSPA6P17066 643 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 KARSQ15046 597 aaKnown RBP5.91□□□□□ -1.46
USF3-202ENST00000478658 TCEAL5Q5H9L2 206 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 CATSPER1Q8NEC5 780 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 SH3TC2Q8TF17 1288 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 OSBPL10Q9BXB5 764 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 OPHN1O60890 802 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 HNMTP50135 292 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 CUL4AQ13619 759 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 SV2BQ7L1I2 683 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 LRRC8CQ8TDW0 803 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 RMDN2Q96LZ7 410 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 RILPQ96NA2 401 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 MMTAG2Q9BU76 263 aaKnown RBP5.91□□□□□ -1.46
USF3-202ENST00000478658 TLR3O15455 904 aaKnown RBP5.91□□□□□ -1.46
USF3-202ENST00000478658 PRR29P0C7W0 189 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 PSMC3P17980 439 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 CES1P23141 567 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 CPSF3Q9UKF6 684 aaKnown RBP5.91□□□□□ -1.46
USF3-202ENST00000478658 AATKQ6ZMQ8 1374 aa5.91□□□□□ -1.46
USF3-202ENST00000478658 CCDC189A1A4V9 331 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 SURF6O75683 361 aaKnown RBP5.9□□□□□ -1.46
USF3-202ENST00000478658 GUCA1CO95843 209 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 UQCRFS1P1P0C7P4 283 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 TMBIM6P55061 237 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 RIPPLY1Q0D2K3 151 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 MFN1Q8IWA4 741 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 DDX50Q9BQ39 737 aaKnown RBP5.9□□□□□ -1.46
USF3-202ENST00000478658 LZTS2Q9BRK4 669 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 CNPY3Q9BT09 278 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 VPS16Q9H269 839 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.9□□□□□ -1.46
USF3-202ENST00000478658 HOMER3Q9NSC5 361 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 ZNF24P17028 368 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 TGFBR2P37173 567 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 TSC22D1Q15714 1073 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 HADHQ16836 314 aaKnown RBP5.9□□□□□ -1.46
USF3-202ENST00000478658 TTC23LQ6PF05 361 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 LLPHQ9BRT6 129 aaKnown RBP5.9□□□□□ -1.46
USF3-202ENST00000478658 STON1Q9Y6Q2 735 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 KRT6AP02538 564 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 KRT6BP04259 564 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 KRT6CP48668 564 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 DCTN2Q13561 401 aaKnown RBP5.9□□□□□ -1.46
USF3-202ENST00000478658 FBXO42Q6P3S6 717 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 OTUD6AQ7L8S5 288 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 BICC1Q9H694 974 aaKnown RBP5.9□□□□□ -1.46
USF3-202ENST00000478658 AZI2Q9H6S1 392 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 CACNA2D2Q9NY47 1150 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 KIF17Q9P2E2 1029 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 DEFA1P59665 94 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 DEFA3P59666 94 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 FBXO41Q8TF61 875 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 HDAC11Q96DB2 347 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 MAP3K20Q9NYL2 800 aaKnown RBP5.9□□□□□ -1.46
USF3-202ENST00000478658 ANGPTL2Q9UKU9 493 aa5.9□□□□□ -1.46
USF3-202ENST00000478658 ARHGDIBP52566 201 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 POLGP54098 1239 aaPredicted RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 YARSP54577 528 aaKnown RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 CSE1LP55060 971 aaKnown RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 TMEM259Q4ZIN3 620 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 SUPT20HQ8NEM7 779 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 DIS3LQ8TF46 1054 aaKnown RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 SKA2Q8WVK7 121 aaPredicted RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 FAM192AQ9GZU8 254 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 SOS2Q07890 1332 aaPredicted RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 LRRD1A4D1F6 860 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 ZNF213O14771 459 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 CCDC166P0CW27 439 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 HSPA2P54652 639 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 DHX9Q08211 1270 aaKnown RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 SV2CQ496J9 727 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 AACSQ86V21 672 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 KLHDC4Q8TBB5 520 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 SNX29Q8TEQ0 813 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 RSAD2Q8WXG1 361 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 RRP36Q96EU6 259 aaKnown RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 MAGEB5Q9BZ81 275 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 KLHL3Q9UH77 587 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 RSL24D1Q9UHA3 163 aaKnown RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 TRIM33Q9UPN9 1127 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 SYCE1LA8MT33 242 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 CLNS1AP54105 237 aaKnown RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 METTL24Q5JXM2 366 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 ARMC2Q8NEN0 867 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 STAMQ92783 540 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 STN1Q9H668 368 aaKnown RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 FANCEQ9HB96 536 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 OLA1Q9NTK5 396 aaKnown RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 ADAM30Q9UKF2 790 aa5.9□□□□□ -1.47
USF3-202ENST00000478658 SETD1BQ9UPS6 1966 aaKnown RBP5.9□□□□□ -1.47
USF3-202ENST00000478658 K7ELQ4 463 aaPredicted RBP5.89□□□□□ -1.47
USF3-202ENST00000478658 MMRN1Q13201 1228 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms