RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 STARD7Q9NQZ5 370 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 MCM9Q9NXL9 1143 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 HOXC10Q9NYD6 342 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 TBX21Q9UL17 535 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 COG5Q9UP83 839 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
LSM2-212ENST00000477182 REV3LO60673 3130 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 COBLO75128 1261 aa13.64□□□□□ -0.23
LSM2-212ENST00000477182 PGK1P00558 417 aa13.64□□□□□ -0.23
LSM2-212ENST00000477182 GH2P01242 217 aa13.64□□□□□ -0.23
LSM2-212ENST00000477182 ZNF365Q70YC5 407 aa13.64□□□□□ -0.23
LSM2-212ENST00000477182 MAML3Q96JK9 1138 aa13.64□□□□□ -0.23
LSM2-212ENST00000477182 SPATC1LQ9H0A9 340 aa13.64□□□□□ -0.23
LSM2-212ENST00000477182 NKX2-4Q9H2Z4 354 aa13.64□□□□□ -0.23
LSM2-212ENST00000477182 MROH8Q9H579 483 aa13.64□□□□□ -0.23
LSM2-212ENST00000477182 CHD7Q9P2D1 2997 aa13.64□□□□□ -0.23
LSM2-212ENST00000477182 ZMYM6O95789 1325 aa13.64□□□□□ -0.23
LSM2-212ENST00000477182 GBF1Q92538 1859 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 ROBO3Q96MS0 1386 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 CYP2D7A0A087X1C5 515 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 MOXD2PA6NHM9 499 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 MINDY4BA8MYZ0 360 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 USP17L12C9JPN9 530 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 USP17L21D6R901 530 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 EPB41L2O43491 1005 aaKnown RBP13.63□□□□□ -0.23
LSM2-212ENST00000477182 CYP2D6P10635 497 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 CSF2RAP15509 400 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 ERCC3P19447 782 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 MRE11P49959 708 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 HAND2P61296 217 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 COG2Q14746 738 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 CTR9Q6PD62 1173 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 RPAP3Q9H6T3 665 aaPredicted RBP13.63□□□□□ -0.23
LSM2-212ENST00000477182 UPF2Q9HAU5 1272 aaKnown RBP13.63□□□□□ -0.23
LSM2-212ENST00000477182 CTNNA3Q9UI47 895 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 PALD1Q9ULE6 856 aa13.63□□□□□ -0.23
LSM2-212ENST00000477182 ZNFX1Q9P2E3 1918 aaKnown RBP13.62□□□□□ -0.23
LSM2-212ENST00000477182 SMIM22K7EJ46 135 aa13.62□□□□□ -0.23
LSM2-212ENST00000477182 SLC27A2O14975 620 aa13.62□□□□□ -0.23
LSM2-212ENST00000477182 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
LSM2-212ENST00000477182 POLR3DP05423 398 aaPredicted RBP13.62□□□□□ -0.23
LSM2-212ENST00000477182 AKR1A1P14550 325 aa13.62□□□□□ -0.23
LSM2-212ENST00000477182 ACLYP53396 1101 aa13.62□□□□□ -0.23
LSM2-212ENST00000477182 EVX2Q03828 476 aa13.62□□□□□ -0.23
LSM2-212ENST00000477182 RAB3GAP1Q15042 981 aa13.62□□□□□ -0.23
LSM2-212ENST00000477182 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
LSM2-212ENST00000477182 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
LSM2-212ENST00000477182 MB21D1Q8N884 522 aa13.62□□□□□ -0.23
LSM2-212ENST00000477182 ARPP21Q9UBL0 812 aaPredicted RBP13.62□□□□□ -0.23
LSM2-212ENST00000477182 FCER1AP12319 257 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 MCCP23508 829 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 HSPA4P34932 840 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 CTDSPL2Q05D32 466 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
LSM2-212ENST00000477182 SBK1Q52WX2 424 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 PPP2R2DQ66LE6 453 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 TATDN1Q6P1N9 297 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 AMOTL1Q8IY63 956 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 STK11IPQ8N1F8 1099 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 C22orf23Q9BZE7 217 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 CABP5Q9NP86 173 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 IL23AQ9NPF7 189 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 C11orf16Q9NQ32 467 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 TAF6LQ9Y6J9 622 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 LRRC37A2A6NM11 1700 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 ELP1O95163 1332 aa13.61□□□□□ -0.23
LSM2-212ENST00000477182 FAM86C2PA6NEL3 165 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 PRR33A8MZF0 331 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 PI4K2BG5E9Z4 385 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 ZNF213O14771 459 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 TLR3O15455 904 aaKnown RBP13.6□□□□□ -0.23
LSM2-212ENST00000477182 TLL1O43897 1013 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 ADAMTS4O75173 837 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 FGBP02675 491 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 CYP21A2P08686 494 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 ACRP10323 421 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 POU3F3P20264 500 aaPredicted RBP13.6□□□□□ -0.23
LSM2-212ENST00000477182 PLCD1P51178 756 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 PPARAQ07869 468 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 C12orf60Q5U649 245 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 RNF20Q5VTR2 975 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 NCAPG2Q86XI2 1143 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 GLT1D1Q96MS3 346 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 TINF2Q9BSI4 451 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 YBX2Q9Y2T7 364 aaKnown RBP13.6□□□□□ -0.23
LSM2-212ENST00000477182 TRANK1O15050 2925 aa13.6□□□□□ -0.23
LSM2-212ENST00000477182 PLS1Q14651 629 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 ABCB5Q2M3G0 1257 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 CERKLQ49MI3 558 aaPredicted RBP13.59□□□□□ -0.23
LSM2-212ENST00000477182 TTC6Q86TZ1 520 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 TBC1D10CQ8IV04 446 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 ACER1Q8TDN7 264 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 KCNB2Q92953 911 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 TBC1D32Q96NH3 1257 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 ANAPC4Q9UJX5 808 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 CNPY2Q9Y2B0 182 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 DIS3Q9Y2L1 958 aaKnown RBP13.59□□□□□ -0.23
LSM2-212ENST00000477182 PCDHA11Q9Y5I1 949 aa13.59□□□□□ -0.23
LSM2-212ENST00000477182 SNX14Q9Y5W7 946 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms