RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 NEK1Q96PY6 1258 aa17.57■□□□□ 0.4
DFFA-203ENST00000476658 UBA5Q9GZZ9 404 aa17.57■□□□□ 0.4
DFFA-203ENST00000476658 UNC93B1Q9H1C4 597 aa17.57■□□□□ 0.4
DFFA-203ENST00000476658 RANBP17Q9H2T7 1088 aaKnown RBP17.57■□□□□ 0.4
DFFA-203ENST00000476658 CPVLQ9H3G5 476 aa17.57■□□□□ 0.4
DFFA-203ENST00000476658 CCPG1Q9ULG6 757 aa17.57■□□□□ 0.4
DFFA-203ENST00000476658 BAZ2BQ9UIF8 2168 aaKnown RBP17.56■□□□□ 0.4
DFFA-203ENST00000476658 DHX16O60231 1041 aaKnown RBP17.56■□□□□ 0.4
DFFA-203ENST00000476658 PGK2P07205 417 aa17.56■□□□□ 0.4
DFFA-203ENST00000476658 COL9A3Q14050 684 aaPredicted RBP17.56■□□□□ 0.4
DFFA-203ENST00000476658 KRT32Q14532 448 aa17.56■□□□□ 0.4
DFFA-203ENST00000476658 NFXL1Q6ZNB6 911 aa17.56■□□□□ 0.4
DFFA-203ENST00000476658 CATIPQ7Z7H3 387 aa17.56■□□□□ 0.4
DFFA-203ENST00000476658 CHST13Q8NET6 341 aa17.56■□□□□ 0.4
DFFA-203ENST00000476658 DDX11Q96FC9 970 aa17.56■□□□□ 0.4
DFFA-203ENST00000476658 TMEM87BQ96K49 555 aa17.56■□□□□ 0.4
DFFA-203ENST00000476658 LY9Q9HBG7 655 aa17.56■□□□□ 0.4
DFFA-203ENST00000476658 RNF146Q9NTX7 359 aa17.56■□□□□ 0.4
DFFA-203ENST00000476658 FBXO40Q9UH90 709 aa17.56■□□□□ 0.4
DFFA-203ENST00000476658 ICAM1P05362 532 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 PRKAR2AP13861 404 aaKnown RBP17.55■□□□□ 0.4
DFFA-203ENST00000476658 HSPA4P34932 840 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 TKFCQ3LXA3 575 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 TSGA10IPQ3SY00 556 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 MFSD14CQ5VZR4 134 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 ANKRD35Q8N283 1001 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 TRERF1Q96PN7 1200 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 MTA3Q9BTC8 594 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 LRRC2Q9BYS8 371 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 ACAD9Q9H845 621 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 GPHNQ9NQX3 736 aaPredicted RBP17.55■□□□□ 0.4
DFFA-203ENST00000476658 FLRT1Q9NZU1 646 aa17.55■□□□□ 0.4
DFFA-203ENST00000476658 CCDC69A6NI79 296 aa17.54■□□□□ 0.4
DFFA-203ENST00000476658 SH2B2O14492 632 aaPredicted RBP17.54■□□□□ 0.4
DFFA-203ENST00000476658 TAL1P17542 331 aaPredicted RBP17.54■□□□□ 0.4
DFFA-203ENST00000476658 ADCK5Q3MIX3 580 aa17.54■□□□□ 0.4
DFFA-203ENST00000476658 STAG2Q8N3U4 1231 aa17.54■□□□□ 0.4
DFFA-203ENST00000476658 NUP133Q8WUM0 1156 aa17.54■□□□□ 0.4
DFFA-203ENST00000476658 VAT1LQ9HCJ6 419 aa17.54■□□□□ 0.4
DFFA-203ENST00000476658 HMX1Q9NP08 348 aaPredicted RBP17.54■□□□□ 0.4
DFFA-203ENST00000476658 MCM3APO60318 1980 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 RPTORQ8N122 1335 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 KLRF2D3W0D1 207 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 EN2P19622 333 aaPredicted RBP17.53■□□□□ 0.4
DFFA-203ENST00000476658 CYP2C19P33261 490 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 CACNB2Q08289 660 aaPredicted RBP17.53■□□□□ 0.4
DFFA-203ENST00000476658 GRM4Q14833 912 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 OLFML2BQ68BL8 750 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 ADGRF4Q8IZF3 695 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 ZNF654Q8IZM8 581 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 TMTC2Q8N394 836 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 MAML3Q96JK9 1138 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.53■□□□□ 0.4
DFFA-203ENST00000476658 MAD2L2Q9UI95 211 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 SNX14Q9Y5W7 946 aa17.53■□□□□ 0.4
DFFA-203ENST00000476658 PALM3A6NDB9 673 aaPredicted RBP17.52■□□□□ 0.4
DFFA-203ENST00000476658 EPB41L2O43491 1005 aaKnown RBP17.52■□□□□ 0.4
DFFA-203ENST00000476658 GJB1P08034 283 aa17.52■□□□□ 0.4
DFFA-203ENST00000476658 TROAPQ12815 778 aa17.52■□□□□ 0.4
DFFA-203ENST00000476658 CDC37Q16543 378 aaPredicted RBP17.52■□□□□ 0.4
DFFA-203ENST00000476658 MUM1L1Q5H9M0 696 aa17.52■□□□□ 0.4
DFFA-203ENST00000476658 MAP3K21Q5TCX8 1036 aa17.52■□□□□ 0.4
DFFA-203ENST00000476658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.52■□□□□ 0.4
DFFA-203ENST00000476658 DHX32Q7L7V1 743 aaKnown RBP17.52■□□□□ 0.4
DFFA-203ENST00000476658 KCNB2Q92953 911 aa17.52■□□□□ 0.4
DFFA-203ENST00000476658 TCEANC2Q96MN5 208 aa17.52■□□□□ 0.4
DFFA-203ENST00000476658 JAKMIP1Q96N16 626 aaKnown RBP17.52■□□□□ 0.4
DFFA-203ENST00000476658 DEFB118Q96PH6 123 aa17.52■□□□□ 0.4
DFFA-203ENST00000476658 MYL10Q9BUA6 226 aa17.52■□□□□ 0.4
DFFA-203ENST00000476658 PNMA2Q9UL42 364 aa17.52■□□□□ 0.4
DFFA-203ENST00000476658 BRCA2P51587 3418 aa17.52■□□□□ 0.39
DFFA-203ENST00000476658 DDAH1O94760 285 aa17.51■□□□□ 0.39
DFFA-203ENST00000476658 HMGB1P09429 215 aaKnown RBP17.51■□□□□ 0.39
DFFA-203ENST00000476658 LIFRP42702 1097 aa17.51■□□□□ 0.39
DFFA-203ENST00000476658 RGS19P49795 217 aa17.51■□□□□ 0.39
DFFA-203ENST00000476658 ZNF792Q3KQV3 632 aa17.51■□□□□ 0.39
DFFA-203ENST00000476658 USH1GQ495M9 461 aa17.51■□□□□ 0.39
DFFA-203ENST00000476658 NSMFQ6X4W1 530 aa17.51■□□□□ 0.39
DFFA-203ENST00000476658 CTCFLQ8NI51 663 aaPredicted RBP17.51■□□□□ 0.39
DFFA-203ENST00000476658 U2AF1L4Q8WU68 220 aaKnown RBP17.51■□□□□ 0.39
DFFA-203ENST00000476658 USP26Q9BXU7 913 aa17.51■□□□□ 0.39
DFFA-203ENST00000476658 JMJD4Q9H9V9 463 aa17.51■□□□□ 0.39
DFFA-203ENST00000476658 A1CFQ9NQ94 594 aaKnown RBP17.51■□□□□ 0.39
DFFA-203ENST00000476658 PAK6Q9NQU5 681 aaPredicted RBP17.51■□□□□ 0.39
DFFA-203ENST00000476658 DIS3Q9Y2L1 958 aaKnown RBP17.51■□□□□ 0.39
DFFA-203ENST00000476658 WDR19Q8NEZ3 1342 aa17.5■□□□□ 0.39
DFFA-203ENST00000476658 DNAJC25-GNG10A0A024R161 153 aa17.5■□□□□ 0.39
DFFA-203ENST00000476658 POTEB2H3BUK9 544 aa17.5■□□□□ 0.39
DFFA-203ENST00000476658 CCND3P30281 292 aaPredicted RBP17.5■□□□□ 0.39
DFFA-203ENST00000476658 KIF5BP33176 963 aa17.5■□□□□ 0.39
DFFA-203ENST00000476658 GJA8P48165 433 aa17.5■□□□□ 0.39
DFFA-203ENST00000476658 FGD1P98174 961 aa17.5■□□□□ 0.39
DFFA-203ENST00000476658 EXOSC10Q01780 885 aaKnown RBP17.5■□□□□ 0.39
DFFA-203ENST00000476658 QRICH1Q2TAL8 776 aa17.5■□□□□ 0.39
DFFA-203ENST00000476658 SLC12A7Q9Y666 1083 aa17.5■□□□□ 0.39
DFFA-203ENST00000476658 PFASO15067 1338 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 FRMPD3Q5JV73 1810 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 SGPL1O95470 568 aa17.49■□□□□ 0.39
DFFA-203ENST00000476658 TFRCP02786 760 aaKnown RBP17.49■□□□□ 0.39
DFFA-203ENST00000476658 CALM1P0DP23 149 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms