RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 RAVER2Q9HCJ3 691 aaKnown RBP19.1■□□□□ 0.65
COL1A1-205ENST00000476387 XPNPEP3Q9NQH7 507 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 SMCHD1A6NHR9 2005 aa19.1■□□□□ 0.65
COL1A1-205ENST00000476387 TMEM232C9JQI7 657 aa19.09■□□□□ 0.65
COL1A1-205ENST00000476387 ZNF213O14771 459 aa19.09■□□□□ 0.65
COL1A1-205ENST00000476387 TAL1P17542 331 aaPredicted RBP19.09■□□□□ 0.65
COL1A1-205ENST00000476387 NOVP48745 357 aa19.09■□□□□ 0.65
COL1A1-205ENST00000476387 C1orf53Q5VUE5 145 aa19.09■□□□□ 0.65
COL1A1-205ENST00000476387 RNF180Q86T96 592 aa19.09■□□□□ 0.65
COL1A1-205ENST00000476387 STAG1Q8WVM7 1258 aa19.09■□□□□ 0.65
COL1A1-205ENST00000476387 CTNNA3Q9UI47 895 aa19.09■□□□□ 0.65
COL1A1-205ENST00000476387 PHF24Q9UPV7 400 aa19.09■□□□□ 0.65
COL1A1-205ENST00000476387 TACC3Q9Y6A5 838 aa19.09■□□□□ 0.65
COL1A1-205ENST00000476387 NMT2O60551 498 aa19.08■□□□□ 0.64
COL1A1-205ENST00000476387 MYCNP04198 464 aaPredicted RBP19.08■□□□□ 0.64
COL1A1-205ENST00000476387 ADCYAP1R1P41586 468 aa19.08■□□□□ 0.64
COL1A1-205ENST00000476387 IMMTQ16891 758 aaKnown RBP19.08■□□□□ 0.64
COL1A1-205ENST00000476387 TBC1D10CQ8IV04 446 aa19.08■□□□□ 0.64
COL1A1-205ENST00000476387 ANKRD35Q8N283 1001 aa19.08■□□□□ 0.64
COL1A1-205ENST00000476387 LRCH3Q96II8 777 aa19.08■□□□□ 0.64
COL1A1-205ENST00000476387 LBHD1Q9BQE6 289 aaPredicted RBP19.08■□□□□ 0.64
COL1A1-205ENST00000476387 IL17RBQ9NRM6 502 aa19.08■□□□□ 0.64
COL1A1-205ENST00000476387 PRKAG2Q9UGJ0 569 aa19.08■□□□□ 0.64
COL1A1-205ENST00000476387 ATP11BQ9Y2G3 1177 aa19.08■□□□□ 0.64
COL1A1-205ENST00000476387 NEFLP07196 543 aa19.07■□□□□ 0.64
COL1A1-205ENST00000476387 MCCP23508 829 aa19.07■□□□□ 0.64
COL1A1-205ENST00000476387 SLC4A3P48751 1232 aa19.07■□□□□ 0.64
COL1A1-205ENST00000476387 MDM2Q00987 491 aaPredicted RBP19.07■□□□□ 0.64
COL1A1-205ENST00000476387 TKFCQ3LXA3 575 aa19.07■□□□□ 0.64
COL1A1-205ENST00000476387 RCSD1Q6JBY9 416 aa19.07■□□□□ 0.64
COL1A1-205ENST00000476387 SNAI1O95863 264 aaPredicted RBP19.06■□□□□ 0.64
COL1A1-205ENST00000476387 CHMLP26374 656 aa19.06■□□□□ 0.64
COL1A1-205ENST00000476387 IKQ13123 557 aaPredicted RBP19.06■□□□□ 0.64
COL1A1-205ENST00000476387 ESR2Q92731 530 aa19.06■□□□□ 0.64
COL1A1-205ENST00000476387 ACAD9Q9H845 621 aa19.06■□□□□ 0.64
COL1A1-205ENST00000476387 FAM184BQ9ULE4 1060 aa19.06■□□□□ 0.64
COL1A1-205ENST00000476387 NEDD4P46934 1319 aa19.05■□□□□ 0.64
COL1A1-205ENST00000476387 PGK1P00558 417 aa19.05■□□□□ 0.64
COL1A1-205ENST00000476387 NT5C2P49902 561 aa19.05■□□□□ 0.64
COL1A1-205ENST00000476387 TRIM60Q495X7 471 aa19.05■□□□□ 0.64
COL1A1-205ENST00000476387 FERMT2Q96AC1 680 aa19.05■□□□□ 0.64
COL1A1-205ENST00000476387 FGD4Q96M96 766 aa19.05■□□□□ 0.64
COL1A1-205ENST00000476387 TSEN34Q9BSV6 310 aaKnown RBP19.05■□□□□ 0.64
COL1A1-205ENST00000476387 IL25Q9H293 177 aa19.05■□□□□ 0.64
COL1A1-205ENST00000476387 MTMR7Q9Y216 660 aa19.05■□□□□ 0.64
COL1A1-205ENST00000476387 ZNF536O15090 1300 aa19.04■□□□□ 0.64
COL1A1-205ENST00000476387 ADAMTS4O75173 837 aa19.04■□□□□ 0.64
COL1A1-205ENST00000476387 TOP1P11387 765 aaKnown RBP19.04■□□□□ 0.64
COL1A1-205ENST00000476387 CCDC96Q2M329 555 aa19.04■□□□□ 0.64
COL1A1-205ENST00000476387 DCAF4Q8WV16 495 aa19.04■□□□□ 0.64
COL1A1-205ENST00000476387 CHMP4CQ96CF2 233 aa19.04■□□□□ 0.64
COL1A1-205ENST00000476387 CCDC136Q96JN2 1154 aa19.04■□□□□ 0.64
COL1A1-205ENST00000476387 ABHD16BQ9H3Z7 469 aa19.04■□□□□ 0.64
COL1A1-205ENST00000476387 HOMER2Q9NSB8 354 aa19.04■□□□□ 0.64
COL1A1-205ENST00000476387 TCP11L1Q9NUJ3 509 aa19.04■□□□□ 0.64
COL1A1-205ENST00000476387 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.04■□□□□ 0.64
COL1A1-205ENST00000476387 ZHX1Q9UKY1 873 aaPredicted RBP19.04■□□□□ 0.64
COL1A1-205ENST00000476387 SYNRGQ9UMZ2 1314 aa19.03■□□□□ 0.64
COL1A1-205ENST00000476387 DUSP11O75319 330 aaKnown RBP19.03■□□□□ 0.64
COL1A1-205ENST00000476387 ACVR2BQ13705 512 aa19.03■□□□□ 0.64
COL1A1-205ENST00000476387 KCTD1Q719H9 257 aa19.03■□□□□ 0.64
COL1A1-205ENST00000476387 FAM133AQ8N9E0 248 aa19.03■□□□□ 0.64
COL1A1-205ENST00000476387 LENG1Q96BZ8 264 aaPredicted RBP19.03■□□□□ 0.64
COL1A1-205ENST00000476387 AGBL1Q96MI9 1066 aa19.03■□□□□ 0.64
COL1A1-205ENST00000476387 RNF146Q9NTX7 359 aa19.03■□□□□ 0.64
COL1A1-205ENST00000476387 PRR12Q9ULL5 1215 aa19.03■□□□□ 0.64
COL1A1-205ENST00000476387 A0A1W2PQ45 241 aaPredicted RBP19.02■□□□□ 0.64
COL1A1-205ENST00000476387 A0A1W2PQY0 241 aa19.02■□□□□ 0.64
COL1A1-205ENST00000476387 MOXD2PA6NHM9 499 aa19.02■□□□□ 0.64
COL1A1-205ENST00000476387 POTEB2H3BUK9 544 aa19.02■□□□□ 0.64
COL1A1-205ENST00000476387 CST5P28325 142 aaPredicted RBP19.02■□□□□ 0.64
COL1A1-205ENST00000476387 ARMCX2Q7L311 632 aa19.02■□□□□ 0.64
COL1A1-205ENST00000476387 IQCA1Q86XH1 822 aa19.02■□□□□ 0.64
COL1A1-205ENST00000476387 KLHDC9Q8NEP7 349 aa19.02■□□□□ 0.64
COL1A1-205ENST00000476387 TMEM47Q9BQJ4 181 aa19.02■□□□□ 0.64
COL1A1-205ENST00000476387 CNNM2Q9H8M5 875 aa19.02■□□□□ 0.64
COL1A1-205ENST00000476387 A1CFQ9NQ94 594 aaKnown RBP19.02■□□□□ 0.64
COL1A1-205ENST00000476387 PDLIM7Q9NR12 457 aa19.02■□□□□ 0.64
COL1A1-205ENST00000476387 LTBP2Q14767 1821 aa19.02■□□□□ 0.63
COL1A1-205ENST00000476387 SGSM2O43147 1006 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 KDM4AO75164 1064 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 ACLYP53396 1101 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 TLE2Q04725 743 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 CCDC178Q5BJE1 867 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 BTNL9Q6UXG8 535 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 NUP133Q8WUM0 1156 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 TTC14Q96N46 770 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 TRERF1Q96PN7 1200 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 KRT23Q9C075 422 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 PRDM5Q9NQX1 630 aaPredicted RBP19.01■□□□□ 0.63
COL1A1-205ENST00000476387 MCM3APO60318 1980 aa19.01■□□□□ 0.63
COL1A1-205ENST00000476387 ASB14A6NK59 587 aa19■□□□□ 0.63
COL1A1-205ENST00000476387 B4E1Z4 1266 aa19■□□□□ 0.63
COL1A1-205ENST00000476387 ALAS1P13196 640 aa19■□□□□ 0.63
COL1A1-205ENST00000476387 CNTN2Q02246 1040 aa19■□□□□ 0.63
COL1A1-205ENST00000476387 CCDC144BQ3MJ40 725 aa19■□□□□ 0.63
COL1A1-205ENST00000476387 CCSAPQ6IQ19 270 aaPredicted RBP19■□□□□ 0.63
COL1A1-205ENST00000476387 CCDC174Q6PII3 467 aa19■□□□□ 0.63
COL1A1-205ENST00000476387 RASGRP2Q7LDG7 609 aa19■□□□□ 0.63
COL1A1-205ENST00000476387 CCDC144CPQ8IYA2 1237 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms