RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ACRBPQ8NEB7 543 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 EAF2Q96CJ1 260 aaPredicted RBP12.66□□□□□ -0.38
U2AF1-209ENST00000475639 CALR3Q96L12 384 aaKnown RBP12.66□□□□□ -0.38
U2AF1-209ENST00000475639 NBPF3Q9H094 633 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 GOLGA6BA6NDN3 693 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 STX17P56962 302 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 COG7P83436 770 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 ARHGAP4P98171 946 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 FMR1Q06787 632 aaKnown RBP eCLIP12.66□□□□□ -0.38
U2AF1-209ENST00000475639 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 SEMA3FQ13275 785 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 METTL16Q86W50 562 aaKnown RBP12.66□□□□□ -0.38
U2AF1-209ENST00000475639 NFE2L3Q9Y4A8 694 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 KIDINS220Q9ULH0 1771 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 HIP1RO75146 1068 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 SMTNP53814 917 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 GRIK3Q13003 919 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 BIRC3Q13489 604 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 LAMA4Q16363 1823 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 MYSM1Q5VVJ2 828 aa12.66□□□□□ -0.38
U2AF1-209ENST00000475639 EDC3Q96F86 508 aaKnown RBP12.66□□□□□ -0.38
U2AF1-209ENST00000475639 CHGBP05060 677 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 NR1I3Q14994 352 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 WDR44Q5JSH3 913 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 ZNF483Q8TF39 744 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-209ENST00000475639 ATP2A3Q93084 1043 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 ZMAT2Q96NC0 199 aaKnown RBP12.65□□□□□ -0.38
U2AF1-209ENST00000475639 HGSO14964 777 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-209ENST00000475639 RBL2Q08999 1139 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 FNBP1Q96RU3 617 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-209ENST00000475639 HPSEQ9Y251 543 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 SBNO1A3KN83 1393 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 KRT15P19012 456 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 SLC12A2P55011 1212 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 IFT20Q8IY31 132 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 ZNF219Q9P2Y4 722 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-209ENST00000475639 PCDHA5Q9Y5H7 936 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 DAPK3O43293 454 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 SKAP2O75563 359 aaPredicted RBP12.65□□□□□ -0.38
U2AF1-209ENST00000475639 TNFAIP3P21580 790 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 GNA11P29992 359 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 GCKP35557 465 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 SLC9C1Q4G0N8 1177 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 TRMT44Q8IYL2 757 aaKnown RBP12.65□□□□□ -0.38
U2AF1-209ENST00000475639 OGFOD1Q8N543 542 aa12.65□□□□□ -0.38
U2AF1-209ENST00000475639 TEX33O43247 280 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 A1BGP04217 495 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 PDCLQ13371 301 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 FAM228AQ86W67 206 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 CCDC13Q8IYE1 715 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 RNF34Q969K3 372 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 GJB4Q9NTQ9 266 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 ASIC3Q9UHC3 531 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 RGPD1P0DJD0 1748 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 CALM1P0DP23 149 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 CALM2P0DP24 149 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 CALM3P0DP25 149 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 DBN1Q16643 649 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 BEND3Q5T5X7 828 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 SHC4Q6S5L8 630 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 MMS19Q96T76 1030 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 UTP11Q9Y3A2 253 aaKnown RBP12.64□□□□□ -0.39
U2AF1-209ENST00000475639 TRAF5O00463 557 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 BACH1O14867 736 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 PDHBP11177 359 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 ANO1Q5XXA6 986 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 YTHDF3Q7Z739 585 aaKnown RBP12.64□□□□□ -0.39
U2AF1-209ENST00000475639 MRRFQ96E11 262 aaKnown RBP12.64□□□□□ -0.39
U2AF1-209ENST00000475639 MED15Q96RN5 788 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 SAMSN1Q9NSI8 373 aaKnown RBP12.64□□□□□ -0.39
U2AF1-209ENST00000475639 SH3BP1Q9Y3L3 701 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 DLC1Q96QB1 1528 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 MAP3K19Q56UN5 1328 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 ANKRD33BA6NCL7 494 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 KIF28PB7ZC32 967 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 SASH1O94885 1247 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 HSP90AA5PQ58FG0 334 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 LIN9Q5TKA1 542 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 TLDC1Q6P9B6 456 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 DTHD1Q6ZMT9 781 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 WAPLQ7Z5K2 1190 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 RILPQ96NA2 401 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 SLC40A1Q9NP59 571 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 HAUS2Q9NVX0 235 aa12.64□□□□□ -0.39
U2AF1-209ENST00000475639 EME2A4GXA9 379 aaPredicted RBP12.63□□□□□ -0.39
U2AF1-209ENST00000475639 PDIA3P30101 505 aaKnown RBP12.63□□□□□ -0.39
U2AF1-209ENST00000475639 TNNI2P48788 182 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 PPP2R5DQ14738 602 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
U2AF1-209ENST00000475639 UBL4BQ8N7F7 174 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 CXorf38Q8TB03 319 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 Q9H521 79 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 HDAC6Q9UBN7 1215 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 TTF2Q9UNY4 1162 aaKnown RBP12.63□□□□□ -0.39
U2AF1-209ENST00000475639 FRMD4BQ9Y2L6 1034 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 FOXN1O15353 648 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 AKNAD1Q5T1N1 836 aa12.63□□□□□ -0.39
U2AF1-209ENST00000475639 RASIP1Q5U651 963 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms