RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 IFIT1BQ5T764 474 aaKnown RBP22.2■■□□□ 1.14
PTCD3-210ENST00000473829 RANBP17Q9H2T7 1088 aaKnown RBP22.2■■□□□ 1.14
PTCD3-210ENST00000473829 CPVLQ9H3G5 476 aa22.2■■□□□ 1.14
PTCD3-210ENST00000473829 FRMPD3Q5JV73 1810 aa22.2■■□□□ 1.14
PTCD3-210ENST00000473829 KCTD2Q14681 263 aa22.19■■□□□ 1.14
PTCD3-210ENST00000473829 U2AF1L4Q8WU68 220 aaKnown RBP22.19■■□□□ 1.14
PTCD3-210ENST00000473829 DEFB118Q96PH6 123 aa22.19■■□□□ 1.14
PTCD3-210ENST00000473829 HOMER2Q9NSB8 354 aa22.19■■□□□ 1.14
PTCD3-210ENST00000473829 RPTORQ8N122 1335 aa22.19■■□□□ 1.14
PTCD3-210ENST00000473829 IFIT3O14879 490 aaKnown RBP22.18■■□□□ 1.14
PTCD3-210ENST00000473829 CCND3P30281 292 aaPredicted RBP22.18■■□□□ 1.14
PTCD3-210ENST00000473829 CYP2C19P33261 490 aa22.18■■□□□ 1.14
PTCD3-210ENST00000473829 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.18■■□□□ 1.14
PTCD3-210ENST00000473829 MAML3Q96JK9 1138 aa22.18■■□□□ 1.14
PTCD3-210ENST00000473829 HMX1Q9NP08 348 aaPredicted RBP22.18■■□□□ 1.14
PTCD3-210ENST00000473829 ZNF792Q3KQV3 632 aa22.17■■□□□ 1.14
PTCD3-210ENST00000473829 GPATCH4Q5T3I0 446 aaKnown RBP22.17■■□□□ 1.14
PTCD3-210ENST00000473829 OLFML2BQ68BL8 750 aa22.17■■□□□ 1.14
PTCD3-210ENST00000473829 UBA5Q9GZZ9 404 aa22.17■■□□□ 1.14
PTCD3-210ENST00000473829 GPHNQ9NQX3 736 aaPredicted RBP22.17■■□□□ 1.14
PTCD3-210ENST00000473829 RNF146Q9NTX7 359 aa22.17■■□□□ 1.14
PTCD3-210ENST00000473829 LCTP09848 1927 aa22.17■■□□□ 1.14
PTCD3-210ENST00000473829 DNAJC25-GNG10A0A024R161 153 aa22.16■■□□□ 1.14
PTCD3-210ENST00000473829 SGPL1O95470 568 aa22.16■■□□□ 1.14
PTCD3-210ENST00000473829 ALAS1P13196 640 aa22.16■■□□□ 1.14
PTCD3-210ENST00000473829 MFSD14CQ5VZR4 134 aa22.16■■□□□ 1.14
PTCD3-210ENST00000473829 TRPV1Q8NER1 839 aa22.16■■□□□ 1.14
PTCD3-210ENST00000473829 CHST13Q8NET6 341 aa22.16■■□□□ 1.14
PTCD3-210ENST00000473829 IGDCC4Q8TDY8 1250 aa22.16■■□□□ 1.14
PTCD3-210ENST00000473829 CCPG1Q9ULG6 757 aa22.16■■□□□ 1.14
PTCD3-210ENST00000473829 ICAM1P05362 532 aa22.15■■□□□ 1.14
PTCD3-210ENST00000473829 WTAPQ15007 396 aa22.15■■□□□ 1.14
PTCD3-210ENST00000473829 ASPRV1Q53RT3 343 aa22.15■■□□□ 1.14
PTCD3-210ENST00000473829 MUM1L1Q5H9M0 696 aa22.15■■□□□ 1.14
PTCD3-210ENST00000473829 TMEM67Q5HYA8 995 aa22.15■■□□□ 1.14
PTCD3-210ENST00000473829 RASEFQ8IZ41 740 aa22.15■■□□□ 1.14
PTCD3-210ENST00000473829 STAG2Q8N3U4 1231 aa22.15■■□□□ 1.14
PTCD3-210ENST00000473829 CRISPLD2Q9H0B8 497 aa22.15■■□□□ 1.14
PTCD3-210ENST00000473829 ACAD9Q9H845 621 aa22.15■■□□□ 1.14
PTCD3-210ENST00000473829 FBXO40Q9UH90 709 aa22.15■■□□□ 1.14
PTCD3-210ENST00000473829 ERICH2A1L162 156 aa22.14■■□□□ 1.13
PTCD3-210ENST00000473829 PRC1O43663 620 aa22.14■■□□□ 1.13
PTCD3-210ENST00000473829 PARP1P09874 1014 aaKnown RBP22.14■■□□□ 1.13
PTCD3-210ENST00000473829 FGD4Q96M96 766 aa22.14■■□□□ 1.13
PTCD3-210ENST00000473829 TRERF1Q96PN7 1200 aa22.14■■□□□ 1.13
PTCD3-210ENST00000473829 LY9Q9HBG7 655 aa22.14■■□□□ 1.13
PTCD3-210ENST00000473829 A1CFQ9NQ94 594 aaKnown RBP22.14■■□□□ 1.13
PTCD3-210ENST00000473829 SLC5A4Q9NY91 659 aa22.14■■□□□ 1.13
PTCD3-210ENST00000473829 MYH6P13533 1939 aa22.14■■□□□ 1.13
PTCD3-210ENST00000473829 MCM3APO60318 1980 aa22.13■■□□□ 1.13
PTCD3-210ENST00000473829 CYBAP13498 195 aa22.13■■□□□ 1.13
PTCD3-210ENST00000473829 SART3Q15020 963 aaKnown RBP22.13■■□□□ 1.13
PTCD3-210ENST00000473829 TKFCQ3LXA3 575 aa22.13■■□□□ 1.13
PTCD3-210ENST00000473829 ANKRD35Q8N283 1001 aa22.13■■□□□ 1.13
PTCD3-210ENST00000473829 DDX11Q96FC9 970 aa22.13■■□□□ 1.13
PTCD3-210ENST00000473829 MAD2L2Q9UI95 211 aa22.13■■□□□ 1.13
PTCD3-210ENST00000473829 DIS3Q9Y2L1 958 aaKnown RBP22.13■■□□□ 1.13
PTCD3-210ENST00000473829 SH2B2O14492 632 aaPredicted RBP22.12■■□□□ 1.13
PTCD3-210ENST00000473829 MCM5P33992 734 aa22.12■■□□□ 1.13
PTCD3-210ENST00000473829 ADCK5Q3MIX3 580 aa22.12■■□□□ 1.13
PTCD3-210ENST00000473829 PRAMEF19Q5SWL8 479 aa22.12■■□□□ 1.13
PTCD3-210ENST00000473829 RNF20Q5VTR2 975 aa22.12■■□□□ 1.13
PTCD3-210ENST00000473829 UBE2Q1Q7Z7E8 422 aa22.12■■□□□ 1.13
PTCD3-210ENST00000473829 ADGRF4Q8IZF3 695 aa22.12■■□□□ 1.13
PTCD3-210ENST00000473829 TFRCP02786 760 aaKnown RBP22.11■■□□□ 1.13
PTCD3-210ENST00000473829 TROAPQ12815 778 aa22.11■■□□□ 1.13
PTCD3-210ENST00000473829 GRM4Q14833 912 aa22.11■■□□□ 1.13
PTCD3-210ENST00000473829 CDC37Q16543 378 aaPredicted RBP22.11■■□□□ 1.13
PTCD3-210ENST00000473829 SLC35G1Q2M3R5 365 aa22.11■■□□□ 1.13
PTCD3-210ENST00000473829 LHX8Q68G74 356 aa22.11■■□□□ 1.13
PTCD3-210ENST00000473829 TINF2Q9BSI4 451 aa22.11■■□□□ 1.13
PTCD3-210ENST00000473829 LRRC2Q9BYS8 371 aa22.11■■□□□ 1.13
PTCD3-210ENST00000473829 WDR19Q8NEZ3 1342 aa22.1■■□□□ 1.13
PTCD3-210ENST00000473829 PALM3A6NDB9 673 aaPredicted RBP22.1■■□□□ 1.13
PTCD3-210ENST00000473829 LRRC37A2A6NM11 1700 aa22.1■■□□□ 1.13
PTCD3-210ENST00000473829 NFIBO00712 420 aa22.1■■□□□ 1.13
PTCD3-210ENST00000473829 CNTN2Q02246 1040 aa22.1■■□□□ 1.13
PTCD3-210ENST00000473829 TSGA10IPQ3SY00 556 aa22.1■■□□□ 1.13
PTCD3-210ENST00000473829 CLEC4DQ8WXI8 215 aa22.1■■□□□ 1.13
PTCD3-210ENST00000473829 MTA3Q9BTC8 594 aa22.1■■□□□ 1.13
PTCD3-210ENST00000473829 MYL10Q9BUA6 226 aa22.1■■□□□ 1.13
PTCD3-210ENST00000473829 JMJD4Q9H9V9 463 aa22.1■■□□□ 1.13
PTCD3-210ENST00000473829 ASTN1O14525 1302 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 KLRF2D3W0D1 207 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 FARP2O94887 1054 aaPredicted RBP22.09■■□□□ 1.13
PTCD3-210ENST00000473829 CNGA1P29973 690 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 MNX1P50219 401 aaPredicted RBP22.09■■□□□ 1.13
PTCD3-210ENST00000473829 FAM133AQ8N9E0 248 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 DIS3LQ8TF46 1054 aaKnown RBP22.09■■□□□ 1.13
PTCD3-210ENST00000473829 KCNB2Q92953 911 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 TMEM87BQ96K49 555 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 TCEANC2Q96MN5 208 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 NEK1Q96PY6 1258 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 CYP39A1Q9NYL5 469 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 OGDHLQ9ULD0 1010 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 PDE4DIPQ5VU43 2346 aa22.09■■□□□ 1.13
PTCD3-210ENST00000473829 SOWAHBA6NEL2 793 aa22.08■■□□□ 1.13
PTCD3-210ENST00000473829 HSPA4P34932 840 aa22.08■■□□□ 1.13
PTCD3-210ENST00000473829 QRICH1Q2TAL8 776 aa22.08■■□□□ 1.13
PTCD3-210ENST00000473829 USH1GQ495M9 461 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms