RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 RBAK-RBAKDNI3L0D1 243 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 CTAGE5O15320 804 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 FOXP2O15409 715 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 ASGR1P07306 291 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 ACRP10323 421 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 FOSL2P15408 326 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 MCCP23508 829 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 COPB2P35606 906 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 PBX2P40425 430 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 TFAP4Q01664 338 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 CTDSPL2Q05D32 466 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 GIMAP6Q6P9H5 292 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 MAMDC4Q6UXC1 1216 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 ARMCX2Q7L311 632 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 ANKRD33Q7Z3H0 272 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 CCDC144CPQ8IYA2 1237 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.36□□□□□ -0.272e-24■■□□□ 12.9
ACTB-209ENST00000473257 PPP1R12CQ9BZL4 782 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 KATNBL1Q9H079 304 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 FEM1BQ9UK73 627 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 TBX21Q9UL17 535 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 PCDHB15Q9Y5E8 787 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 MYO9BQ13459 2157 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 ASTN1O14525 1302 aa13.36□□□□□ -0.27
ACTB-209ENST00000473257 SOWAHBA6NEL2 793 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 DCDC2CA8MYV0 355 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 PATL2C9JE40 543 aaKnown RBP13.35□□□□□ -0.27
ACTB-209ENST00000473257 DUSP11O75319 330 aaKnown RBP13.35□□□□□ -0.27
ACTB-209ENST00000473257 TTLL1O95922 423 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 TSPY3P0CV98 308 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 TSPY8P0CW00 308 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 BMP3P12645 472 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
ACTB-209ENST00000473257 GNASQ5JWF2 1037 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 KCTD1Q719H9 257 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 MKL1Q969V6 931 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 GPATCH3Q96I76 525 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 TSEN34Q9BSV6 310 aaKnown RBP13.35□□□□□ -0.27
ACTB-209ENST00000473257 CHMP4BQ9H444 224 aaKnown RBP13.35□□□□□ -0.27
ACTB-209ENST00000473257 PRDM6Q9NQX0 595 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 REV3LO60673 3130 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 ZNF536O15090 1300 aa13.35□□□□□ -0.27
ACTB-209ENST00000473257 ATP2A1O14983 1001 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 TIMP1P01033 207 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 CSF2RAP15509 400 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 DNAJB2P25686 324 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 CYP2C18P33260 490 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 CDK7P50613 346 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 PPARAQ07869 468 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 MUM1L1Q5H9M0 696 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 VPS53Q5VIR6 699 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 NOL8Q76FK4 1167 aaKnown RBP13.34□□□□□ -0.27
ACTB-209ENST00000473257 EEPD1Q7L9B9 569 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 GMCL1P1Q8NEA9 526 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 NUP133Q8WUM0 1156 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 FSD1Q9BTV5 496 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 UPF3AQ9H1J1 476 aaKnown RBP13.34□□□□□ -0.27
ACTB-209ENST00000473257 A1CFQ9NQ94 594 aaKnown RBP13.34□□□□□ -0.27
ACTB-209ENST00000473257 PDGFCQ9NRA1 345 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 RNF146Q9NTX7 359 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 UMODL1Q5DID0 1318 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 MUC3AQ02505 3323 aa13.34□□□□□ -0.27
ACTB-209ENST00000473257 MOXD2PA6NHM9 499 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 ZFYP08048 801 aaPredicted RBP13.33□□□□□ -0.28
ACTB-209ENST00000473257 ALAS1P13196 640 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 GNAT2P19087 354 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 GJA9P57773 515 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 TMEM240Q5SV17 173 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 ZMYM1Q5SVZ6 1142 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 CXCL17Q6UXB2 119 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
ACTB-209ENST00000473257 MSL3Q8N5Y2 521 aaKnown RBP13.33□□□□□ -0.28
ACTB-209ENST00000473257 FAM133AQ8N9E0 248 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 PPP1R13LQ8WUF5 828 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 PPM1EQ8WY54 764 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 GLT1D1Q96MS3 346 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 NAPBQ9H115 298 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 ABHD16BQ9H3Z7 469 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 IL17RBQ9NRM6 502 aa13.33□□□□□ -0.28
ACTB-209ENST00000473257 ARVCFO00192 962 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 CST5P28325 142 aaPredicted RBP13.32□□□□□ -0.28
ACTB-209ENST00000473257 SLC16A2P36021 539 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 SLC1A4P43007 532 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 PSMC6P62333 389 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 TNFAIP2Q03169 654 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 TTBK2Q6IQ55 1244 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 ZNF365Q70YC5 407 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 FBXO16Q8IX29 292 aaPredicted RBP13.32□□□□□ -0.28
ACTB-209ENST00000473257 CHST13Q8NET6 341 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 TOX2Q96NM4 488 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 TRERF1Q96PN7 1200 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 ACAD9Q9H845 621 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 CXXC1Q9P0U4 656 aaPredicted RBP13.32□□□□□ -0.28
ACTB-209ENST00000473257 STX8Q9UNK0 236 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.32□□□□□ -0.283e-23■■□□□ 14.2
ACTB-209ENST00000473257 PLIN4Q96Q06 1357 aa13.32□□□□□ -0.28
ACTB-209ENST00000473257 A0A0U1RQG5 324 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms