RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SRRDQ9UH36 339 aa17.4■□□□□ 0.38
CDC42SE1-203ENST00000470278 ZNF236Q9UL36 1845 aa17.4■□□□□ 0.38
CDC42SE1-203ENST00000470278 KLRF2D3W0D1 207 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 ZBTB43O43298 467 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 ZBED4O75132 1171 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 SMARCA1P28370 1054 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 CCNA1P78396 465 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 PPP2R5BQ15173 497 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 ANKRD1Q15327 319 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 STAG2Q8N3U4 1231 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 SHCBP1Q8NEM2 672 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 NUP133Q8WUM0 1156 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 CHMP4CQ96CF2 233 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 LZTS2Q9BRK4 669 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 MYL10Q9BUA6 226 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 SPATC1LQ9H0A9 340 aa17.39■□□□□ 0.37
CDC42SE1-203ENST00000470278 COPB2P35606 906 aa17.38■□□□□ 0.37
CDC42SE1-203ENST00000470278 SLC16A2P36021 539 aa17.38■□□□□ 0.37
CDC42SE1-203ENST00000470278 PSMC4P43686 418 aa17.38■□□□□ 0.37
CDC42SE1-203ENST00000470278 GNAQP50148 359 aa17.38■□□□□ 0.37
CDC42SE1-203ENST00000470278 APOBRQ0VD83 1088 aa17.38■□□□□ 0.37
CDC42SE1-203ENST00000470278 FANCBQ8NB91 859 aa17.38■□□□□ 0.37
CDC42SE1-203ENST00000470278 RBM28Q9NW13 759 aaKnown RBP17.38■□□□□ 0.37
CDC42SE1-203ENST00000470278 PNMA2Q9UL42 364 aa17.38■□□□□ 0.37
CDC42SE1-203ENST00000470278 GOLGA8BA8MQT2 603 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 SLC25A27O95847 323 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 GNRH1P01148 92 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 MAPK4P31152 587 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 NEK4P51957 841 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 KIF22Q14807 665 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 RABEP1Q15276 862 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 Q3C1V9 767 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 SAMD1Q6SPF0 538 aaPredicted RBP17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 RIOX2Q8IUF8 465 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 ADGRF4Q8IZF3 695 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 MTMR8Q96EF0 704 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 ZNF274Q96GC6 653 aaPredicted RBP17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 TMEM106CQ9BVX2 250 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 SPZ1Q9BXG8 430 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 RIOX1Q9H6W3 641 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 COLQQ9Y215 455 aaPredicted RBP17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 ZNF536O15090 1300 aa17.37■□□□□ 0.37
CDC42SE1-203ENST00000470278 H0YGN5 161 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 PEX10O60683 326 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 ICAM1P05362 532 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 RXRAP19793 462 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 STAT3P40763 770 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 METAP2P50579 478 aaKnown RBP eCLIP17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 AK2P54819 239 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 PRMT2P55345 433 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 FCGRTP55899 365 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 PRKCZQ05513 592 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 ARHGEF6Q15052 776 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 RTN1Q16799 776 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 TMTC3Q6ZXV5 915 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 NBPF11Q86T75 865 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 MOV10L1Q9BXT6 1211 aaKnown RBP17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 UBA5Q9GZZ9 404 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 PORCNQ9H237 461 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 MROH8Q9H579 483 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 JMJD4Q9H9V9 463 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 GABRQQ9UN88 632 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 CTDP1Q9Y5B0 961 aaPredicted RBP17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 MYH6P13533 1939 aa17.36■□□□□ 0.37
CDC42SE1-203ENST00000470278 CCDC196A0A1B0GTZ2 297 aa17.35■□□□□ 0.37
CDC42SE1-203ENST00000470278 GOLGA8AA7E2F4 631 aa17.35■□□□□ 0.37
CDC42SE1-203ENST00000470278 CYTH3O43739 400 aa17.35■□□□□ 0.37
CDC42SE1-203ENST00000470278 PDIA3P30101 505 aaKnown RBP17.35■□□□□ 0.37
CDC42SE1-203ENST00000470278 SLC35G1Q2M3R5 365 aa17.35■□□□□ 0.37
CDC42SE1-203ENST00000470278 SNRNP48Q6IEG0 339 aaKnown RBP17.35■□□□□ 0.37
CDC42SE1-203ENST00000470278 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.35■□□□□ 0.37
CDC42SE1-203ENST00000470278 CPVLQ9H3G5 476 aa17.35■□□□□ 0.37
CDC42SE1-203ENST00000470278 PLEKHA8P1O95397 391 aa17.34■□□□□ 0.37
CDC42SE1-203ENST00000470278 ERCC3P19447 782 aa17.34■□□□□ 0.37
CDC42SE1-203ENST00000470278 PLS1Q14651 629 aa17.34■□□□□ 0.37
CDC42SE1-203ENST00000470278 CDC37Q16543 378 aaPredicted RBP17.34■□□□□ 0.37
CDC42SE1-203ENST00000470278 TKFCQ3LXA3 575 aa17.34■□□□□ 0.37
CDC42SE1-203ENST00000470278 CCDC144CPQ8IYA2 1237 aa17.34■□□□□ 0.37
CDC42SE1-203ENST00000470278 RAVER2Q9HCJ3 691 aaKnown RBP17.34■□□□□ 0.37
CDC42SE1-203ENST00000470278 FAM217BQ9NTX9 383 aaPredicted RBP17.34■□□□□ 0.37
CDC42SE1-203ENST00000470278 CNTNAP5Q8WYK1 1306 aa17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 TNPO2O14787 897 aaKnown RBP17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 ZBTB5O15062 677 aa17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 DHX16O60231 1041 aaKnown RBP17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 GRK4P32298 578 aa17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 GPR142Q7Z601 462 aa17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 RAB11FIP4Q86YS3 637 aa17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 ABRAQ8N0Z2 381 aa17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 CPXCR1Q8N123 301 aa17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 SRBD1Q8N5C6 995 aaKnown RBP17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 SOCS4Q8WXH5 440 aa17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 FBXO40Q9UH90 709 aa17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 TPCN1Q9ULQ1 816 aa17.33■□□□□ 0.36
CDC42SE1-203ENST00000470278 FMNL1O95466 1100 aaPredicted RBP17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 CCL5P13501 91 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 CDC27P30260 824 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 FUT2Q10981 343 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
CDC42SE1-203ENST00000470278 CCDC174Q6PII3 467 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms