RNA–Protein interactions for RNA: ENST00000468777.5

PCCB-208, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-208ENST00000468777 SPATC1LQ9H0A9 340 aa22.16■■□□□ 1.14
PCCB-208ENST00000468777 NCOA5Q9HCD5 579 aaKnown RBP22.16■■□□□ 1.14
PCCB-208ENST00000468777 FAM217BQ9NTX9 383 aaPredicted RBP22.16■■□□□ 1.14
PCCB-208ENST00000468777 MYH6P13533 1939 aa22.16■■□□□ 1.14
PCCB-208ENST00000468777 ADD1P35611 737 aaKnown RBP22.15■■□□□ 1.14
PCCB-208ENST00000468777 LACTBP83111 547 aaPredicted RBP22.15■■□□□ 1.14
PCCB-208ENST00000468777 SRBD1Q8N5C6 995 aaKnown RBP22.15■■□□□ 1.14
PCCB-208ENST00000468777 CD99L2Q8TCZ2 262 aa22.15■■□□□ 1.14
PCCB-208ENST00000468777 RANBP17Q9H2T7 1088 aaKnown RBP22.15■■□□□ 1.14
PCCB-208ENST00000468777 JMJD4Q9H9V9 463 aa22.15■■□□□ 1.14
PCCB-208ENST00000468777 ZNF536O15090 1300 aa22.15■■□□□ 1.14
PCCB-208ENST00000468777 FKTNO75072 461 aa22.15■■□□□ 1.14
PCCB-208ENST00000468777 CD2BP2O95400 341 aaKnown RBP22.15■■□□□ 1.14
PCCB-208ENST00000468777 HOMER1Q86YM7 354 aa22.15■■□□□ 1.14
PCCB-208ENST00000468777 AGBL1Q96MI9 1066 aa22.15■■□□□ 1.14
PCCB-208ENST00000468777 MOV10L1Q9BXT6 1211 aaKnown RBP22.15■■□□□ 1.14
PCCB-208ENST00000468777 EFCC1Q9HA90 598 aa22.15■■□□□ 1.14
PCCB-208ENST00000468777 DOCK3Q8IZD9 2030 aa22.14■■□□□ 1.14
PCCB-208ENST00000468777 ST18O60284 1047 aa22.14■■□□□ 1.13
PCCB-208ENST00000468777 LARGE1O95461 756 aa22.14■■□□□ 1.13
PCCB-208ENST00000468777 ANKRD1Q15327 319 aa22.14■■□□□ 1.13
PCCB-208ENST00000468777 NOM1Q5C9Z4 860 aaKnown RBP22.14■■□□□ 1.13
PCCB-208ENST00000468777 SNRNP48Q6IEG0 339 aaKnown RBP22.14■■□□□ 1.13
PCCB-208ENST00000468777 TMTC3Q6ZXV5 915 aa22.14■■□□□ 1.13
PCCB-208ENST00000468777 RIPK3Q9Y572 518 aa22.14■■□□□ 1.13
PCCB-208ENST00000468777 MGAMO43451 1857 aa22.14■■□□□ 1.13
PCCB-208ENST00000468777 PPFIA3O75145 1194 aa22.13■■□□□ 1.13
PCCB-208ENST00000468777 STAT3P40763 770 aa22.13■■□□□ 1.13
PCCB-208ENST00000468777 CDC37Q16543 378 aaPredicted RBP22.13■■□□□ 1.13
PCCB-208ENST00000468777 WDR78Q5VTH9 848 aa22.13■■□□□ 1.13
PCCB-208ENST00000468777 ZNF274Q96GC6 653 aaPredicted RBP22.13■■□□□ 1.13
PCCB-208ENST00000468777 K7ELQ4 463 aaPredicted RBP22.13■■□□□ 1.13
PCCB-208ENST00000468777 RCAN1P53805 252 aa22.13■■□□□ 1.13
PCCB-208ENST00000468777 PIGSQ96S52 555 aa22.13■■□□□ 1.13
PCCB-208ENST00000468777 TEX13BQ9BXU2 312 aa22.13■■□□□ 1.13
PCCB-208ENST00000468777 RIOX1Q9H6W3 641 aa22.13■■□□□ 1.13
PCCB-208ENST00000468777 HOMER2Q9NSB8 354 aa22.13■■□□□ 1.13
PCCB-208ENST00000468777 RBM28Q9NW13 759 aaKnown RBP22.13■■□□□ 1.13
PCCB-208ENST00000468777 hCG_1642624A0A1W2PR95 340 aa22.12■■□□□ 1.13
PCCB-208ENST00000468777 PSMC4P43686 418 aa22.12■■□□□ 1.13
PCCB-208ENST00000468777 GNAQP50148 359 aa22.12■■□□□ 1.13
PCCB-208ENST00000468777 ME3Q16798 604 aa22.12■■□□□ 1.13
PCCB-208ENST00000468777 NCAPG2Q86XI2 1143 aa22.12■■□□□ 1.13
PCCB-208ENST00000468777 NID2Q14112 1375 aa22.12■■□□□ 1.13
PCCB-208ENST00000468777 DTNBO60941 627 aa22.11■■□□□ 1.13
PCCB-208ENST00000468777 FDX1P10109 184 aa22.11■■□□□ 1.13
PCCB-208ENST00000468777 ERCC3P19447 782 aa22.11■■□□□ 1.13
PCCB-208ENST00000468777 CCNA1P78396 465 aa22.11■■□□□ 1.13
PCCB-208ENST00000468777 QRICH1Q2TAL8 776 aa22.11■■□□□ 1.13
PCCB-208ENST00000468777 CCAR1Q8IX12 1150 aaKnown RBP22.11■■□□□ 1.13
PCCB-208ENST00000468777 TRIM47Q96LD4 638 aa22.11■■□□□ 1.13
PCCB-208ENST00000468777 SPZ1Q9BXG8 430 aa22.11■■□□□ 1.13
PCCB-208ENST00000468777 BRCA2P51587 3418 aa22.11■■□□□ 1.13
PCCB-208ENST00000468777 USH1GQ495M9 461 aa22.11■■□□□ 1.13
PCCB-208ENST00000468777 CCPG1Q9ULG6 757 aa22.11■■□□□ 1.13
PCCB-208ENST00000468777 ATP2A1O14983 1001 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 FMNL1O95466 1100 aaPredicted RBP22.1■■□□□ 1.13
PCCB-208ENST00000468777 ICAM1P05362 532 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 OAZ1P54368 228 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 SCRN1Q12765 414 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 KIF22Q14807 665 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 RIOX2Q8IUF8 465 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 NECAB1Q8N987 351 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 MTMR8Q96EF0 704 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 ERO1AQ96HE7 468 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 LZTS2Q9BRK4 669 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 SLKQ9H2G2 1235 aaPredicted RBP22.1■■□□□ 1.13
PCCB-208ENST00000468777 CNTNAP5Q8WYK1 1306 aa22.1■■□□□ 1.13
PCCB-208ENST00000468777 PPP1R11O60927 126 aaPredicted RBP22.09■■□□□ 1.13
PCCB-208ENST00000468777 ALAS1P13196 640 aa22.09■■□□□ 1.13
PCCB-208ENST00000468777 FUT2Q10981 343 aa22.09■■□□□ 1.13
PCCB-208ENST00000468777 IL27Q8NEV9 243 aa22.09■■□□□ 1.13
PCCB-208ENST00000468777 CCDC196A0A1B0GTZ2 297 aa22.09■■□□□ 1.13
PCCB-208ENST00000468777 TNPO2O14787 897 aaKnown RBP22.09■■□□□ 1.13
PCCB-208ENST00000468777 ZBTB5O15062 677 aa22.09■■□□□ 1.13
PCCB-208ENST00000468777 GPR142Q7Z601 462 aa22.09■■□□□ 1.13
PCCB-208ENST00000468777 SPRYD3Q8NCJ5 442 aa22.09■■□□□ 1.13
PCCB-208ENST00000468777 PHKBQ93100 1093 aa22.09■■□□□ 1.13
PCCB-208ENST00000468777 CWC22Q9HCG8 908 aaKnown RBP22.09■■□□□ 1.13
PCCB-208ENST00000468777 PLXNB2O15031 1838 aa22.08■■□□□ 1.13
PCCB-208ENST00000468777 PFKFB2O60825 505 aa22.08■■□□□ 1.13
PCCB-208ENST00000468777 FCGRTP55899 365 aa22.08■■□□□ 1.13
PCCB-208ENST00000468777 PPP2R5BQ15173 497 aa22.08■■□□□ 1.13
PCCB-208ENST00000468777 NTRK3Q16288 839 aa22.08■■□□□ 1.13
PCCB-208ENST00000468777 LIMCH1Q9UPQ0 1083 aa22.08■■□□□ 1.13
PCCB-208ENST00000468777 MAPK4P31152 587 aa22.07■■□□□ 1.12
PCCB-208ENST00000468777 RRP36Q96EU6 259 aaKnown RBP22.07■■□□□ 1.12
PCCB-208ENST00000468777 SLC25A27O95847 323 aa22.07■■□□□ 1.12
PCCB-208ENST00000468777 SMARCA1P28370 1054 aa22.07■■□□□ 1.12
PCCB-208ENST00000468777 MUM1L1Q5H9M0 696 aa22.07■■□□□ 1.12
PCCB-208ENST00000468777 FBXO11Q86XK2 927 aa22.07■■□□□ 1.12
PCCB-208ENST00000468777 SHCBP1Q8NEM2 672 aa22.07■■□□□ 1.12
PCCB-208ENST00000468777 TRERF1Q96PN7 1200 aa22.07■■□□□ 1.12
PCCB-208ENST00000468777 RNF146Q9NTX7 359 aa22.07■■□□□ 1.12
PCCB-208ENST00000468777 ST3GAL1Q11201 340 aa22.06■■□□□ 1.12
PCCB-208ENST00000468777 PLEKHH3Q7Z736 793 aa22.06■■□□□ 1.12
PCCB-208ENST00000468777 GTF3C6Q969F1 213 aa22.06■■□□□ 1.12
PCCB-208ENST00000468777 MROH8Q9H579 483 aa22.06■■□□□ 1.12
PCCB-208ENST00000468777 SEC63Q9UGP8 760 aaKnown RBP22.06■■□□□ 1.12
PCCB-208ENST00000468777 TRIM17Q9Y577 477 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms