RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 NUTM2EB1AL46 878 aaPredicted RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 HSF2BPO75031 334 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 IDEP14735 1019 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 MCM7P33993 719 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 MEA1Q16626 185 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 CCNI2Q6ZMN8 369 aaPredicted RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 PIK3AP1Q6ZUJ8 805 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 MICALCLQ6ZW33 695 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 CMTR1Q8N1G2 835 aaKnown RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 ENAHQ8N8S7 591 aaPredicted RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 NOA1Q8NC60 698 aaKnown RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 CCDC42Q96M95 316 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 AK8Q96MA6 479 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 SEC31BQ9NQW1 1179 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 TCP11L1Q9NUJ3 509 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 RNF14Q9UBS8 474 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 ANKRD36CQ5JPF3 1778 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 LRRIQ3A6PVS8 624 aaPredicted RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 UBE2Q2LH0YL09 131 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 PHACTR2O75167 634 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 SRGNP10124 158 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 MTIF2P46199 727 aaKnown RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 GTF2A1P52655 376 aaPredicted RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 VAV2P52735 878 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 TBC1D8BQ0IIM8 1120 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 PFKFB3Q16875 520 aaPredicted RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 GLE1Q53GS7 698 aaKnown RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 CAVIN4Q5BKX8 364 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 B4GALNT4Q76KP1 1039 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 TNFRSF25Q93038 417 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 FAM212AQ96EL1 285 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 ORC4O43929 436 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 PRCPP42785 496 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 EMBQ6PCB8 327 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 BLIDQ8IZY5 108 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 MIGA1Q8NAN2 632 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 HELBQ8NG08 1087 aaPredicted RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 CRNKL1Q9BZJ0 848 aaKnown RBP7.09□□□□□ -1.27
PSMD6-204ENST00000467853 LRRC27Q9C0I9 530 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 RNF39Q9H2S5 420 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 DISC1Q9NRI5 854 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 LRP5O75197 1615 aa7.09□□□□□ -1.27
PSMD6-204ENST00000467853 N4BP1O75113 896 aaKnown RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 RHOBTB3O94955 611 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 FUT2Q10981 343 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 NNTQ13423 1086 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 HLFQ16534 295 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 ICE2Q659A1 982 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 ZNF34Q8IZ26 560 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CSGALNACT2Q8N6G5 542 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CCSER1Q9C0I3 900 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 FGRP09769 529 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CCNE1P24864 410 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 PRPHP41219 470 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 EPHB4P54760 987 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CNNM4Q6P4Q7 775 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CHP1Q99653 195 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 TUBGCP2Q9BSJ2 902 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 SELENOOQ9BVL4 669 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 YY1AP1Q9H869 796 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 NHEJ1Q9H9Q4 299 aaPredicted RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 HYOU1Q9Y4L1 999 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CNTNAP5Q8WYK1 1306 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 PRDM1O75626 825 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 KIAA0754O94854 1291 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CPP00450 1065 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 ATP1A1P05023 1023 aaKnown RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 ARHGAP27Q6ZUM4 889 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CCDC84Q86UT8 332 aaPredicted RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 NKX2-3Q8TAU0 364 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 ZNF507Q8TCN5 953 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CAPZA3Q96KX2 299 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 MMS19Q96T76 1030 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 LZTS2Q9BRK4 669 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 NUCKS1Q9H1E3 243 aaKnown RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 ABCF2Q9UG63 623 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 PCDHA4Q9UN74 947 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 COL5A2P05997 1499 aaPredicted RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 COL22A1Q8NFW1 1626 aaPredicted RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 TRIM66O15016 1216 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 PLEKHA8P1O95397 391 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 SYF2O95926 243 aaKnown RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CYP19A1P11511 503 aaPredicted RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CASP1P29466 404 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 TROAPQ12815 778 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 ORC2Q13416 577 aaPredicted RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CCDC96Q2M329 555 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 GIMAP8Q8ND71 665 aaPredicted RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 P2RX5Q93086 422 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 NOC4LQ9BVI4 516 aaKnown RBP7.08□□□□□ -1.28
PSMD6-204ENST00000467853 CAPS2Q9BXY5 557 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 EDEM3Q9BZQ6 932 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 KAT14Q9H8E8 782 aa7.08□□□□□ -1.28
PSMD6-204ENST00000467853 BCORQ6W2J9 1755 aa7.07□□□□□ -1.28
PSMD6-204ENST00000467853 FAM205CA6NFA0 338 aa7.07□□□□□ -1.28
PSMD6-204ENST00000467853 VGLL3A8MV65 326 aa7.07□□□□□ -1.28
PSMD6-204ENST00000467853 SHOX2O60902 331 aaPredicted RBP7.07□□□□□ -1.28
PSMD6-204ENST00000467853 PRPF6O94906 941 aaKnown RBP7.07□□□□□ -1.28
PSMD6-204ENST00000467853 HERVK_113P62684 666 aa7.07□□□□□ -1.28
PSMD6-204ENST00000467853 TADA2BQ86TJ2 420 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms