RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 OR8K1Q8NGG5 319 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 AZI2Q9H6S1 392 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 ZNF408Q9H9D4 720 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 RASAL2Q9UJF2 1139 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 SLIT1O75093 1534 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 ERICH4A6NGS2 130 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 FLOT1O75955 427 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 BMP3P12645 472 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 ZNF512BQ96KM6 892 aaPredicted RBP15.32■□□□□ 0.04
BRAT1-203ENST00000467558 IKBKBO14920 756 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 HSF2BPO75031 334 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 IGSF3O75054 1194 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 TNFAIP3P21580 790 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 MAGEA1P43355 309 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 ASIC2Q16515 512 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 PLA2G4DQ86XP0 818 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 SPICE1Q8N0Z3 855 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 TBCKQ8TEA7 893 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 KIFAP3Q92845 792 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 FERMT1Q9BQL6 677 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 PCDHB13Q9Y5F0 798 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 MSANTD4Q8NCY6 345 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 SPATA31A5Q5VU36 1347 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 SPATA31A7Q8IWB4 1347 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 DPCR1Q3MIW9 517 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 FAM26FQ5R3K3 315 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 DPY19L2Q6NUT2 758 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 OTUD6AQ7L8S5 288 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 FNBP4Q8N3X1 1017 aaPredicted RBP15.31■□□□□ 0.04
BRAT1-203ENST00000467558 JAKMIP2Q96AA8 810 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 CCPG1Q9ULG6 757 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 ERCC3P19447 782 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 SGMS1Q86VZ5 419 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 PCDHB6Q9Y5E3 794 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 MYOM1P52179 1685 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 TESPA1A2RU30 521 aaPredicted RBP15.31■□□□□ 0.04
BRAT1-203ENST00000467558 SPDYE4A6NLX3 237 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 GDF11O95390 407 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 PLEKHA8P1O95397 391 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 HARSP12081 509 aaKnown RBP15.31■□□□□ 0.04
BRAT1-203ENST00000467558 ARHGEF16Q5VV41 709 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 APBB1IPQ7Z5R6 666 aaPredicted RBP15.31■□□□□ 0.04
BRAT1-203ENST00000467558 RGS22Q8NE09 1264 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 DDX12PQ92771 950 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 COL4A3BPQ9Y5P4 624 aa15.31■□□□□ 0.04
BRAT1-203ENST00000467558 MST1RQ04912 1400 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 CYP2D6P10635 497 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 SLC16A2P36021 539 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 ADKP55263 362 aaKnown RBP15.3■□□□□ 0.04
BRAT1-203ENST00000467558 GRM1Q13255 1194 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 CLEC17AQ6ZS10 378 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 ENAHQ8N8S7 591 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-203ENST00000467558 BBXQ8WY36 941 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-203ENST00000467558 INCENPQ9NQS7 918 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 FAM207AQ9NSI2 230 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-203ENST00000467558 LARSQ9P2J5 1176 aaKnown RBP15.3■□□□□ 0.04
BRAT1-203ENST00000467558 ARHGAP23Q9P227 1491 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 MYL1P05976 194 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 EVCP57679 992 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 TNNC1P63316 161 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 BRDTQ58F21 947 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-203ENST00000467558 EEF2P13639 858 aaKnown RBP15.3■□□□□ 0.04
BRAT1-203ENST00000467558 VAV2P52735 878 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 ARL6IP4Q66PJ3 421 aaKnown RBP15.3■□□□□ 0.04
BRAT1-203ENST00000467558 SH3GLB2Q9NR46 395 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 PANK4Q9NVE7 773 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 MROH7-TTC4A0A0A0MT08 1334 aa15.3■□□□□ 0.04
BRAT1-203ENST00000467558 PPP2R3AQ06190 1150 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 KLHL30Q0D2K2 578 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 SULF1Q8IWU6 871 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 LARP4BQ92615 738 aaKnown RBP15.29■□□□□ 0.04
BRAT1-203ENST00000467558 VTI1AQ96AJ9 217 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 COA7Q96BR5 231 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 TEKT3Q9BXF9 490 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 XRCC5P13010 732 aaKnown RBP15.29■□□□□ 0.04
BRAT1-203ENST00000467558 SECISBP2LQ93073 1101 aaKnown RBP15.29■□□□□ 0.04
BRAT1-203ENST00000467558 SLF1Q9BQI6 1058 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 ARMCX3Q9UH62 379 aaPredicted RBP15.29■□□□□ 0.04
BRAT1-203ENST00000467558 ZNF500O60304 480 aaPredicted RBP15.29■□□□□ 0.04
BRAT1-203ENST00000467558 RHOXF2BP0C7M4 288 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 NOX5Q96PH1 765 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 RHOXF2Q9BQY4 288 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 SLC39A2Q9NP94 309 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 GJB4Q9NTQ9 266 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 ATP6V0A2Q9Y487 856 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 TMEM110-MUSTN1A8MSY1 372 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 RIOK3O14730 519 aaKnown RBP15.29■□□□□ 0.04
BRAT1-203ENST00000467558 EXOSC10Q01780 885 aaKnown RBP15.29■□□□□ 0.04
BRAT1-203ENST00000467558 ITPK1Q13572 414 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 ZNF609O15014 1411 aa15.29■□□□□ 0.04
BRAT1-203ENST00000467558 SFMBT2Q5VUG0 894 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 STOX1Q6ZVD7 989 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 TMEM179Q6ZVK1 233 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 RRAGAQ7L523 313 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 LRRC8AQ8IWT6 810 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 SP8Q8IXZ3 490 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 TMEM47Q9BQJ4 181 aa15.28■□□□□ 0.04
BRAT1-203ENST00000467558 KIAA1024Q9UPX6 916 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms