RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 NDUFB10O96000 172 aa22.42■■□□□ 1.18
USP11-205ENST00000467378 SMAD3P84022 425 aaKnown RBP22.42■■□□□ 1.18
USP11-205ENST00000467378 CHST3Q7LGC8 479 aa22.42■■□□□ 1.18
USP11-205ENST00000467378 GTF3C2Q8WUA4 911 aaPredicted RBP22.42■■□□□ 1.18
USP11-205ENST00000467378 NEK1Q96PY6 1258 aa22.42■■□□□ 1.18
USP11-205ENST00000467378 DNAH12Q6ZR08 3092 aa22.42■■□□□ 1.18
USP11-205ENST00000467378 DNM1LO00429 736 aa22.41■■□□□ 1.18
USP11-205ENST00000467378 MSCO60682 206 aa22.41■■□□□ 1.18
USP11-205ENST00000467378 KRT32Q14532 448 aa22.41■■□□□ 1.18
USP11-205ENST00000467378 WDR78Q5VTH9 848 aa22.41■■□□□ 1.18
USP11-205ENST00000467378 SLFN13Q68D06 897 aa22.41■■□□□ 1.18
USP11-205ENST00000467378 UBAC1Q9BSL1 405 aa22.41■■□□□ 1.18
USP11-205ENST00000467378 RAD21O60216 631 aa22.4■■□□□ 1.18
USP11-205ENST00000467378 MCM5P33992 734 aa22.4■■□□□ 1.18
USP11-205ENST00000467378 IGDCC4Q8TDY8 1250 aa22.4■■□□□ 1.18
USP11-205ENST00000467378 BADQ92934 168 aa22.4■■□□□ 1.18
USP11-205ENST00000467378 MTA3Q9BTC8 594 aa22.4■■□□□ 1.18
USP11-205ENST00000467378 FLRT1Q9NZU1 646 aa22.4■■□□□ 1.18
USP11-205ENST00000467378 COL11A1P12107 1806 aaPredicted RBP22.39■■□□□ 1.17
USP11-205ENST00000467378 TNFRSF10AO00220 468 aa22.39■■□□□ 1.17
USP11-205ENST00000467378 IFIT3O14879 490 aaKnown RBP22.39■■□□□ 1.17
USP11-205ENST00000467378 TJAP1Q5JTD0 557 aa22.39■■□□□ 1.17
USP11-205ENST00000467378 FAM83BQ5T0W9 1011 aa22.39■■□□□ 1.17
USP11-205ENST00000467378 GJC2Q5T442 439 aaPredicted RBP22.39■■□□□ 1.17
USP11-205ENST00000467378 NUP88Q99567 741 aaPredicted RBP22.39■■□□□ 1.17
USP11-205ENST00000467378 PRUNE2Q8WUY3 3088 aa22.39■■□□□ 1.17
USP11-205ENST00000467378 PRC1O43663 620 aa22.38■■□□□ 1.17
USP11-205ENST00000467378 MCCP23508 829 aa22.38■■□□□ 1.17
USP11-205ENST00000467378 EXOSC10Q01780 885 aaKnown RBP22.38■■□□□ 1.17
USP11-205ENST00000467378 POTEEQ6S8J3 1075 aa22.38■■□□□ 1.17
USP11-205ENST00000467378 GMCL1Q96IK5 515 aa22.38■■□□□ 1.17
USP11-205ENST00000467378 TANGO6Q9C0B7 1094 aa22.38■■□□□ 1.17
USP11-205ENST00000467378 BMP3P12645 472 aa22.37■■□□□ 1.17
USP11-205ENST00000467378 CCNA1P78396 465 aa22.37■■□□□ 1.17
USP11-205ENST00000467378 COG2Q14746 738 aa22.37■■□□□ 1.17
USP11-205ENST00000467378 IFIT1BQ5T764 474 aaKnown RBP22.37■■□□□ 1.17
USP11-205ENST00000467378 SLC39A5Q6ZMH5 540 aa22.37■■□□□ 1.17
USP11-205ENST00000467378 PNMA1Q8ND90 353 aa22.37■■□□□ 1.17
USP11-205ENST00000467378 KAT14Q9H8E8 782 aa22.37■■□□□ 1.17
USP11-205ENST00000467378 SENP2Q9HC62 589 aa22.37■■□□□ 1.17
USP11-205ENST00000467378 RAPGEFL1Q9UHV5 662 aa22.37■■□□□ 1.17
USP11-205ENST00000467378 A0A0G2JMZ2 1700 aa22.37■■□□□ 1.17
USP11-205ENST00000467378 WDR19Q8NEZ3 1342 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 ERICH2A1L162 156 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 SLC15A5A6NIM6 579 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 KBTBD13C9JR72 458 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 MYCNP04198 464 aaPredicted RBP22.36■■□□□ 1.17
USP11-205ENST00000467378 HMGB1P09429 215 aaKnown RBP22.36■■□□□ 1.17
USP11-205ENST00000467378 DSG3P32926 999 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 CYP2C19P33261 490 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 WTAPQ15007 396 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 SART3Q15020 963 aaKnown RBP22.36■■□□□ 1.17
USP11-205ENST00000467378 LBX2Q6XYB7 198 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 DHX32Q7L7V1 743 aaKnown RBP22.36■■□□□ 1.17
USP11-205ENST00000467378 RASGRP2Q7LDG7 609 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 ARRDC4Q8NCT1 418 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 TMEM87BQ96K49 555 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 JAKMIP1Q96N16 626 aaKnown RBP22.36■■□□□ 1.17
USP11-205ENST00000467378 GPHNQ9NQX3 736 aaPredicted RBP22.36■■□□□ 1.17
USP11-205ENST00000467378 HOXC10Q9NYD6 342 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 RABGAP1Q9Y3P9 1069 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 IVNS1ABPQ9Y6Y0 642 aa22.36■■□□□ 1.17
USP11-205ENST00000467378 SPDYE16A6NNV3 312 aaPredicted RBP22.35■■□□□ 1.17
USP11-205ENST00000467378 FLOT1O75955 427 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 SNHG28P0DPA3 235 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 PTPREP23469 700 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 SLC1A4P43007 532 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 TRIM60Q495X7 471 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 TMEM67Q5HYA8 995 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 DCAF4Q8WV16 495 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 CHMP4CQ96CF2 233 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 LY9Q9HBG7 655 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 FBXO28Q9NVF7 368 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 MTMR7Q9Y216 660 aa22.35■■□□□ 1.17
USP11-205ENST00000467378 SH2B2O14492 632 aaPredicted RBP22.34■■□□□ 1.17
USP11-205ENST00000467378 PDHBP11177 359 aa22.34■■□□□ 1.17
USP11-205ENST00000467378 CPA1P15085 419 aa22.34■■□□□ 1.17
USP11-205ENST00000467378 PSMA5P28066 241 aa22.34■■□□□ 1.17
USP11-205ENST00000467378 TRPV1Q8NER1 839 aa22.34■■□□□ 1.17
USP11-205ENST00000467378 NPLOC4Q8TAT6 608 aa22.34■■□□□ 1.17
USP11-205ENST00000467378 LRRC2Q9BYS8 371 aa22.34■■□□□ 1.17
USP11-205ENST00000467378 ADAMTS5Q9UNA0 930 aa22.34■■□□□ 1.17
USP11-205ENST00000467378 TMEM265A0A087WTH1 108 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 CNMDO75829 334 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 LIFRP42702 1097 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 ANO1Q5XXA6 986 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 KCTD1Q719H9 257 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 IL17RAQ96F46 866 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 RNPC3Q96LT9 517 aaKnown RBP22.33■■□□□ 1.17
USP11-205ENST00000467378 TCEANC2Q96MN5 208 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 TM6SF1Q9BZW5 370 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 PDLIM7Q9NR12 457 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 FEM1BQ9UK73 627 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 PPP1R9AQ9ULJ8 1098 aa22.33■■□□□ 1.17
USP11-205ENST00000467378 TMEM232C9JQI7 657 aa22.32■■□□□ 1.16
USP11-205ENST00000467378 PLA2G6O60733 806 aa22.32■■□□□ 1.16
USP11-205ENST00000467378 ANAPC15P60006 121 aa22.32■■□□□ 1.16
USP11-205ENST00000467378 BLOC1S2Q6QNY1 142 aa22.32■■□□□ 1.16
USP11-205ENST00000467378 SH3RF1Q7Z6J0 888 aa22.32■■□□□ 1.16
USP11-205ENST00000467378 TMTC2Q8N394 836 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms