RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 SIRT2Q8IXJ6 389 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 PRR7Q8TB68 274 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 COA7Q96BR5 231 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 TRIM34Q9BYJ4 488 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 RNF208Q9H0X6 261 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 IL1RAPL2Q9NP60 686 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 BIN2Q9UBW5 565 aaPredicted RBP8.56□□□□□ -1.04
SND1-205ENST00000467238 DDX19BQ9UMR2 479 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 MYH4Q9Y623 1939 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 C19orf81C9J6K1 198 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 USP17L10C9JJH3 530 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 ITGB2P05107 769 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 INHAP05111 366 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 USP5P45974 858 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 IRX3P78415 501 aaPredicted RBP8.55□□□□□ -1.04
SND1-205ENST00000467238 HABP4Q5JVS0 413 aaKnown RBP8.55□□□□□ -1.04
SND1-205ENST00000467238 RPAP2Q8IXW5 612 aaPredicted RBP8.55□□□□□ -1.04
SND1-205ENST00000467238 CLASRPQ8N2M8 674 aaKnown RBP8.55□□□□□ -1.04
SND1-205ENST00000467238 MEIOBQ8N635 442 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 U2AF1L4Q8WU68 220 aaKnown RBP8.55□□□□□ -1.04
SND1-205ENST00000467238 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.55□□□□□ -1.04
SND1-205ENST00000467238 NANOS1Q8WY41 292 aaKnown RBP8.55□□□□□ -1.04
SND1-205ENST00000467238 KIF1BPQ96EK5 621 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 RIOK1Q9BRS2 568 aaKnown RBP8.55□□□□□ -1.04
SND1-205ENST00000467238 EHD4Q9H223 541 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 ZBTB40Q9NUA8 1239 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 TMOD4Q9NZQ9 345 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 MORF4L1Q9UBU8 362 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 COG6Q9Y2V7 657 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 PLXNA1Q9UIW2 1896 aa8.55□□□□□ -1.04
SND1-205ENST00000467238 MCM3APO60318 1980 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 SPTLC1O15269 473 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 HMMRO75330 724 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 SGPL1O95470 568 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 GH2P01242 217 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 PDE6AP16499 860 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 CLK2P49760 499 aaKnown RBP8.54□□□□□ -1.04
SND1-205ENST00000467238 HERVK_113P62684 666 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 PTSQ03393 145 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 TTF1Q15361 905 aaPredicted RBP8.54□□□□□ -1.04
SND1-205ENST00000467238 TUSC1Q2TAM9 212 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 TATDN1Q6P1N9 297 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 P2RX7Q99572 595 aaKnown RBP8.54□□□□□ -1.04
SND1-205ENST00000467238 PAK6Q9NQU5 681 aaPredicted RBP8.54□□□□□ -1.04
SND1-205ENST00000467238 SERPINB13Q9UIV8 391 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 GJD2Q9UKL4 321 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 GREB1LQ9C091 1923 aaPredicted RBP8.54□□□□□ -1.04
SND1-205ENST00000467238 A0A0G2JMZ2 1700 aa8.54□□□□□ -1.04
SND1-205ENST00000467238 MAGEB6P1A0A0J9YX57 407 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 TCRBV5S4A2TA0A5A2 114 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 H0YGN5 161 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 APBB1O00213 710 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 PEX10O60683 326 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 RAB11FIP3O75154 756 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 FARP2O94887 1054 aaPredicted RBP8.53□□□□□ -1.04
SND1-205ENST00000467238 HMGCRP04035 888 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 SHMT1P34896 483 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 GRM5P41594 1212 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 PLCD1P51178 756 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 GABPAQ06546 454 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 SLC9C2Q5TAH2 1124 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 USP17L2Q6R6M4 530 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 LYPD8Q6UX82 237 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 TTC6Q86TZ1 520 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 GTF3C2Q8WUA4 911 aaPredicted RBP8.53□□□□□ -1.04
SND1-205ENST00000467238 C12orf42Q96LP6 360 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 DEFB118Q96PH6 123 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.53□□□□□ -1.04
SND1-205ENST00000467238 TXNRD2Q9NNW7 524 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 RCAN3Q9UKA8 241 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 ZNF532Q9HCE3 1301 aa8.53□□□□□ -1.04
SND1-205ENST00000467238 NCOR1O75376 2440 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 GOLIM4O00461 696 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 IFIT2P09913 472 aaKnown RBP8.52□□□□□ -1.05
SND1-205ENST00000467238 CAPN2P17655 700 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 ERVK-9P63128 1117 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 ERVK-24P63145 666 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 ABCB5Q2M3G0 1257 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 CERKLQ49MI3 558 aaPredicted RBP8.52□□□□□ -1.05
SND1-205ENST00000467238 GPRC5AQ8NFJ5 357 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 FAM174AQ8TBP5 190 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 FOXJ1Q92949 421 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 EDC3Q96F86 508 aaKnown RBP8.52□□□□□ -1.05
SND1-205ENST00000467238 DNAJC2Q99543 621 aaKnown RBP8.52□□□□□ -1.05
SND1-205ENST00000467238 FEZ1Q99689 392 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 HTATIP2Q9BUP3 242 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 CRNKL1Q9BZJ0 848 aaKnown RBP8.52□□□□□ -1.05
SND1-205ENST00000467238 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.52□□□□□ -1.05
SND1-205ENST00000467238 CHMP4BQ9H444 224 aaKnown RBP8.52□□□□□ -1.05
SND1-205ENST00000467238 RBPJLQ9UBG7 517 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 PCDHB15Q9Y5E8 787 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 ZNF236Q9UL36 1845 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 CDH23Q9H251 3354 aa8.52□□□□□ -1.05
SND1-205ENST00000467238 POLR3DP05423 398 aaPredicted RBP8.51□□□□□ -1.05
SND1-205ENST00000467238 VCAM1P19320 739 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 GUCY1A2P33402 732 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 ADD2P35612 726 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 FXR1P51114 621 aaKnown RBP eCLIP8.51□□□□□ -1.051e-7■■□□□ 12.2
SND1-205ENST00000467238 USP14P54578 494 aa8.51□□□□□ -1.05
SND1-205ENST00000467238 MARSP56192 900 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms