RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 HOMER2Q9NSB8 354 aa16.89■□□□□ 0.29
ATG4B-214ENST00000465399 MROH7Q68CQ1 1323 aa16.89■□□□□ 0.29
ATG4B-214ENST00000465399 LRRC37A2A6NM11 1700 aa16.88■□□□□ 0.29
ATG4B-214ENST00000465399 C6orf222P0C671 652 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-214ENST00000465399 CST5P28325 142 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-214ENST00000465399 STAT2P52630 851 aa16.88■□□□□ 0.29
ATG4B-214ENST00000465399 TFAP4Q01664 338 aa16.88■□□□□ 0.29
ATG4B-214ENST00000465399 PPARAQ07869 468 aa16.88■□□□□ 0.29
ATG4B-214ENST00000465399 IKQ13123 557 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-214ENST00000465399 PPP4R3BQ5MIZ7 849 aa16.88■□□□□ 0.29
ATG4B-214ENST00000465399 PI4K2BQ8TCG2 481 aa16.88■□□□□ 0.29
ATG4B-214ENST00000465399 CDX2Q99626 313 aaPredicted RBP16.88■□□□□ 0.29
ATG4B-214ENST00000465399 SEMA6BQ9H3T3 888 aa16.88■□□□□ 0.29
ATG4B-214ENST00000465399 CDH23Q9H251 3354 aa16.88■□□□□ 0.29
ATG4B-214ENST00000465399 MYADML2A6NDP7 307 aa16.87■□□□□ 0.29
ATG4B-214ENST00000465399 TMEM232C9JQI7 657 aa16.87■□□□□ 0.29
ATG4B-214ENST00000465399 FAAP100Q0VG06 881 aa16.87■□□□□ 0.29
ATG4B-214ENST00000465399 CCDC144BQ3MJ40 725 aa16.87■□□□□ 0.29
ATG4B-214ENST00000465399 CCSAPQ6IQ19 270 aaPredicted RBP16.87■□□□□ 0.29
ATG4B-214ENST00000465399 ARMCX2Q7L311 632 aa16.87■□□□□ 0.29
ATG4B-214ENST00000465399 FAM160B2Q86V87 743 aa16.87■□□□□ 0.29
ATG4B-214ENST00000465399 CHURC1Q8WUH1 139 aa16.87■□□□□ 0.29
ATG4B-214ENST00000465399 ACAD9Q9H845 621 aa16.87■□□□□ 0.29
ATG4B-214ENST00000465399 ELP1O95163 1332 aa16.87■□□□□ 0.29
ATG4B-214ENST00000465399 ASGR1P07306 291 aa16.86■□□□□ 0.29
ATG4B-214ENST00000465399 SLC1A4P43007 532 aa16.86■□□□□ 0.29
ATG4B-214ENST00000465399 EPHB4P54760 987 aa16.86■□□□□ 0.29
ATG4B-214ENST00000465399 ZMYM1Q5SVZ6 1142 aa16.86■□□□□ 0.29
ATG4B-214ENST00000465399 CCDC144CPQ8IYA2 1237 aa16.86■□□□□ 0.29
ATG4B-214ENST00000465399 VTI1AQ96AJ9 217 aa16.86■□□□□ 0.29
ATG4B-214ENST00000465399 GMCL1Q96IK5 515 aa16.86■□□□□ 0.29
ATG4B-214ENST00000465399 FGD4Q96M96 766 aa16.86■□□□□ 0.29
ATG4B-214ENST00000465399 UPF3AQ9H1J1 476 aaKnown RBP16.86■□□□□ 0.29
ATG4B-214ENST00000465399 TMEM265A0A087WTH1 108 aa16.85■□□□□ 0.29
ATG4B-214ENST00000465399 TIMP1P01033 207 aa16.85■□□□□ 0.29
ATG4B-214ENST00000465399 MX1P20591 662 aa16.85■□□□□ 0.29
ATG4B-214ENST00000465399 GJA9P57773 515 aa16.85■□□□□ 0.29
ATG4B-214ENST00000465399 STAG1Q8WVM7 1258 aa16.85■□□□□ 0.29
ATG4B-214ENST00000465399 TTYH1Q9H313 450 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-214ENST00000465399 RNF146Q9NTX7 359 aa16.85■□□□□ 0.29
ATG4B-214ENST00000465399 ZBTB47Q9UFB7 747 aaPredicted RBP16.85■□□□□ 0.29
ATG4B-214ENST00000465399 STX8Q9UNK0 236 aa16.85■□□□□ 0.29
ATG4B-214ENST00000465399 LCTP09848 1927 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 EYSQ5T1H1 3165 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-214ENST00000465399 TSPY2A6NKD2 308 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 ADCY6O43306 1168 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 MCCP23508 829 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 CNTN2Q02246 1040 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 TKFCQ3LXA3 575 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 GNASQ5JWF2 1037 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 CCDC174Q6PII3 467 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 MAFAQ8NHW3 353 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-214ENST00000465399 OTUD7AQ8TE49 926 aaPredicted RBP16.84■□□□□ 0.29
ATG4B-214ENST00000465399 MYLIPQ8WY64 445 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 TBX21Q9UL17 535 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 PCDHB15Q9Y5E8 787 aa16.84■□□□□ 0.29
ATG4B-214ENST00000465399 ASB14A6NK59 587 aa16.83■□□□□ 0.28
ATG4B-214ENST00000465399 ZNF536O15090 1300 aa16.83■□□□□ 0.28
ATG4B-214ENST00000465399 TLR3O15455 904 aaKnown RBP16.83■□□□□ 0.28
ATG4B-214ENST00000465399 ALAS1P13196 640 aa16.83■□□□□ 0.28
ATG4B-214ENST00000465399 FOSL2P15408 326 aa16.83■□□□□ 0.28
ATG4B-214ENST00000465399 IRX5P78411 483 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-214ENST00000465399 MFSD5Q6N075 450 aa16.83■□□□□ 0.28
ATG4B-214ENST00000465399 FAM133AQ8N9E0 248 aa16.83■□□□□ 0.28
ATG4B-214ENST00000465399 CHMP4CQ96CF2 233 aa16.83■□□□□ 0.28
ATG4B-214ENST00000465399 AGBL1Q96MI9 1066 aa16.83■□□□□ 0.28
ATG4B-214ENST00000465399 TRERF1Q96PN7 1200 aa16.83■□□□□ 0.28
ATG4B-214ENST00000465399 COL25A1Q9BXS0 654 aaPredicted RBP16.83■□□□□ 0.28
ATG4B-214ENST00000465399 KATNBL1Q9H079 304 aa16.83■□□□□ 0.28
ATG4B-214ENST00000465399 A1CFQ9NQ94 594 aaKnown RBP16.83■□□□□ 0.28
ATG4B-214ENST00000465399 ARVCFO00192 962 aa16.82■□□□□ 0.28
ATG4B-214ENST00000465399 PLA2G6O60733 806 aa16.82■□□□□ 0.28
ATG4B-214ENST00000465399 CDK7P50613 346 aa16.82■□□□□ 0.28
ATG4B-214ENST00000465399 TNFAIP2Q03169 654 aa16.82■□□□□ 0.28
ATG4B-214ENST00000465399 CTDSPL2Q05D32 466 aa16.82■□□□□ 0.28
ATG4B-214ENST00000465399 PPIGQ13427 754 aaKnown RBP eCLIP16.82■□□□□ 0.281e-10■□□□□ 10.9
ATG4B-214ENST00000465399 CCDC129Q6ZRS4 1044 aa16.82■□□□□ 0.28
ATG4B-214ENST00000465399 KCTD1Q719H9 257 aa16.82■□□□□ 0.28
ATG4B-214ENST00000465399 NOL8Q76FK4 1167 aaKnown RBP16.82■□□□□ 0.28
ATG4B-214ENST00000465399 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.82■□□□□ 0.28
ATG4B-214ENST00000465399 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-214ENST00000465399 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-214ENST00000465399 DNAJB2P25686 324 aa16.81■□□□□ 0.28
ATG4B-214ENST00000465399 RCSD1Q6JBY9 416 aa16.81■□□□□ 0.28
ATG4B-214ENST00000465399 TMEM199Q8N511 208 aa16.81■□□□□ 0.28
ATG4B-214ENST00000465399 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.81■□□□□ 0.285e-7■□□□□ 11.3
ATG4B-214ENST00000465399 IL17RBQ9NRM6 502 aa16.81■□□□□ 0.28
ATG4B-214ENST00000465399 PRR12Q9ULL5 1215 aa16.81■□□□□ 0.28
ATG4B-214ENST00000465399 GBF1Q92538 1859 aa16.81■□□□□ 0.28
ATG4B-214ENST00000465399 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.8■□□□□ 0.28
ATG4B-214ENST00000465399 SOWAHBA6NEL2 793 aa16.8■□□□□ 0.28
ATG4B-214ENST00000465399 FOXP2O15409 715 aa16.8■□□□□ 0.28
ATG4B-214ENST00000465399 RANBP6O60518 1105 aaKnown RBP16.8■□□□□ 0.28
ATG4B-214ENST00000465399 NKX3-2P78367 333 aa16.8■□□□□ 0.28
ATG4B-214ENST00000465399 BEX3Q00994 111 aa16.8■□□□□ 0.28
ATG4B-214ENST00000465399 TLK2Q86UE8 772 aa16.8■□□□□ 0.28
ATG4B-214ENST00000465399 FAM126BQ8IXS8 530 aa16.8■□□□□ 0.28
ATG4B-214ENST00000465399 AP5M1Q9H0R1 490 aa16.8■□□□□ 0.28
ATG4B-214ENST00000465399 MTMR7Q9Y216 660 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms