RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 MICALL1Q8N3F8 863 aa13.37□□□□□ -0.27
SSR3-202ENST00000463503 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
SSR3-202ENST00000463503 TSPYL2Q9H2G4 693 aaPredicted RBP13.37□□□□□ -0.27
SSR3-202ENST00000463503 ANTXR1Q9H6X2 564 aa13.37□□□□□ -0.27
SSR3-202ENST00000463503 VCPKMTQ9H867 229 aa13.37□□□□□ -0.27
SSR3-202ENST00000463503 FBXO28Q9NVF7 368 aa13.37□□□□□ -0.27
SSR3-202ENST00000463503 CNPY2Q9Y2B0 182 aa13.37□□□□□ -0.27
SSR3-202ENST00000463503 GTF3C3Q9Y5Q9 886 aa13.37□□□□□ -0.27
SSR3-202ENST00000463503 TTC41PQ6P2S7 1318 aa13.37□□□□□ -0.27
SSR3-202ENST00000463503 CFAP54Q96N23 3096 aa13.36□□□□□ -0.27
SSR3-202ENST00000463503 DNAJC25-GNG10A0A024R161 153 aa13.36□□□□□ -0.27
SSR3-202ENST00000463503 APBB1O00213 710 aa13.36□□□□□ -0.27
SSR3-202ENST00000463503 SMARCA5O60264 1052 aaPredicted RBP13.36□□□□□ -0.27
SSR3-202ENST00000463503 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
SSR3-202ENST00000463503 POU3F3P20264 500 aaPredicted RBP13.36□□□□□ -0.27
SSR3-202ENST00000463503 AAK1Q2M2I8 961 aa13.36□□□□□ -0.27
SSR3-202ENST00000463503 MAMDC4Q6UXC1 1216 aa13.36□□□□□ -0.27
SSR3-202ENST00000463503 MSL3Q8N5Y2 521 aaKnown RBP13.36□□□□□ -0.27
SSR3-202ENST00000463503 OSBPL3Q9H4L5 887 aa13.36□□□□□ -0.27
SSR3-202ENST00000463503 ATG2AQ2TAZ0 1938 aa13.36□□□□□ -0.27
SSR3-202ENST00000463503 TRIP12Q14669 1992 aaPredicted RBP13.36□□□□□ -0.27
SSR3-202ENST00000463503 SCN10AQ9Y5Y9 1956 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 VWA5AO00534 786 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 TLL1O43897 1013 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 GPR37L1O60883 481 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 C6orf222P0C671 652 aaPredicted RBP13.35□□□□□ -0.27
SSR3-202ENST00000463503 AKR1B1P15121 316 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 GJA9P57773 515 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 ICA1Q05084 483 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 OTOP2Q7RTS6 562 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 FGD4Q96M96 766 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 CCDC8Q9H0W5 538 aaPredicted RBP13.35□□□□□ -0.27
SSR3-202ENST00000463503 WNT8AQ9H1J5 351 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 ZHX1Q9UKY1 873 aaPredicted RBP13.35□□□□□ -0.27
SSR3-202ENST00000463503 FAM184BQ9ULE4 1060 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 MTCH2Q9Y6C9 303 aa13.35□□□□□ -0.27
SSR3-202ENST00000463503 FAM86C2PA6NEL3 165 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 EPOPA6NHQ4 379 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
SSR3-202ENST00000463503 CYP2D6P10635 497 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 ATP5JP18859 108 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 STAT3P40763 770 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 NKX3-2P78367 333 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 TMED8Q6PL24 325 aaPredicted RBP13.34□□□□□ -0.27
SSR3-202ENST00000463503 SAMD1Q6SPF0 538 aaPredicted RBP13.34□□□□□ -0.27
SSR3-202ENST00000463503 SLC43A3Q8NBI5 491 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 PCSK9Q8NBP7 692 aaKnown RBP13.34□□□□□ -0.27
SSR3-202ENST00000463503 GPATCH3Q96I76 525 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 LNPKQ9C0E8 428 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 KATNBL1Q9H079 304 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 MTIF3Q9H2K0 278 aaKnown RBP13.34□□□□□ -0.27
SSR3-202ENST00000463503 ARHGEF10LQ9HCE6 1279 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 ECHDC1Q9NTX5 307 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 MCM9Q9NXL9 1143 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 PPP1R9AQ9ULJ8 1098 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 PCDHA11Q9Y5I1 949 aa13.34□□□□□ -0.27
SSR3-202ENST00000463503 SMIM22K7EJ46 135 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 FGBP02675 491 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 MX1P20591 662 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 COPB2P35606 906 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 CCDC144BQ3MJ40 725 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 KRT40Q6A162 431 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
SSR3-202ENST00000463503 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 SDR42E1Q8WUS8 393 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 HIPK3Q9H422 1215 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 SH2D4AQ9H788 454 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 DCP1AQ9NPI6 582 aaPredicted RBP13.33□□□□□ -0.28
SSR3-202ENST00000463503 ASTN1O14525 1302 aa13.33□□□□□ -0.28
SSR3-202ENST00000463503 MAGEB6P1A0A0J9YX57 407 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 RFXAPO00287 272 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 TLR3O15455 904 aaKnown RBP13.32□□□□□ -0.28
SSR3-202ENST00000463503 PDE4AP27815 886 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 PDE1AP54750 535 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 ACVR2BQ13705 512 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.32□□□□□ -0.28
SSR3-202ENST00000463503 ALYREFQ86V81 257 aaKnown RBP13.32□□□□□ -0.28
SSR3-202ENST00000463503 TICAM2Q86XR7 235 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 NOC4LQ9BVI4 516 aaKnown RBP13.32□□□□□ -0.28
SSR3-202ENST00000463503 CD320Q9NPF0 282 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.32□□□□□ -0.28
SSR3-202ENST00000463503 SWAP70Q9UH65 585 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 RIPK3Q9Y572 518 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 GRIN2DO15399 1336 aa13.32□□□□□ -0.28
SSR3-202ENST00000463503 ARHGEF15O94989 841 aa13.31□□□□□ -0.28
SSR3-202ENST00000463503 CA3P07451 260 aa13.31□□□□□ -0.28
SSR3-202ENST00000463503 CCL23P55773 120 aa13.31□□□□□ -0.28
SSR3-202ENST00000463503 SKIV2LQ15477 1246 aaKnown RBP13.31□□□□□ -0.28
SSR3-202ENST00000463503 GNASQ5JWF2 1037 aa13.31□□□□□ -0.28
SSR3-202ENST00000463503 FAM83BQ5T0W9 1011 aa13.31□□□□□ -0.28
SSR3-202ENST00000463503 PI4K2BQ8TCG2 481 aa13.31□□□□□ -0.28
SSR3-202ENST00000463503 TEX13BQ9BXU2 312 aa13.31□□□□□ -0.28
SSR3-202ENST00000463503 CRNKL1Q9BZJ0 848 aaKnown RBP13.31□□□□□ -0.28
SSR3-202ENST00000463503 COG5Q9UP83 839 aa13.31□□□□□ -0.28
SSR3-202ENST00000463503 SLC4A7Q9Y6M7 1214 aa13.31□□□□□ -0.28
SSR3-202ENST00000463503 NLRC5Q86WI3 1866 aa13.3□□□□□ -0.28
SSR3-202ENST00000463503 TCRBV5S4A2TA0A5A2 114 aa13.3□□□□□ -0.28
SSR3-202ENST00000463503 B4GALT4O60513 344 aa13.3□□□□□ -0.28
SSR3-202ENST00000463503 EEF2P13639 858 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms