RNA–Protein interactions for RNA: ENST00000463343.1

SF1-212, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 983 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-212ENST00000463343 TMEM67Q5HYA8 995 aa20.73■□□□□ 0.91
SF1-212ENST00000463343 CCAR1Q8IX12 1150 aaKnown RBP20.73■□□□□ 0.91
SF1-212ENST00000463343 SLC38A10Q9HBR0 1119 aa20.73■□□□□ 0.91
SF1-212ENST00000463343 ZNF214Q9UL59 606 aaPredicted RBP20.73■□□□□ 0.91
SF1-212ENST00000463343 PARP14Q460N5 1801 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 SOX1O00570 391 aaPredicted RBP20.72■□□□□ 0.91
SF1-212ENST00000463343 GOLGA8HP0CJ92 632 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 COL6A1P12109 1028 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 SLC16A2P36021 539 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 EXOSC10Q01780 885 aaKnown RBP20.72■□□□□ 0.91
SF1-212ENST00000463343 IKQ13123 557 aaPredicted RBP20.72■□□□□ 0.91
SF1-212ENST00000463343 KRT32Q14532 448 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 WTAPQ15007 396 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 SART3Q15020 963 aaKnown RBP20.72■□□□□ 0.91
SF1-212ENST00000463343 LRIT3Q3SXY7 679 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 GPR142Q7Z601 462 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 PLEKHH3Q7Z736 793 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 C7orf61Q8IZ16 206 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 SHCBP1Q8NEM2 672 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 MTA3Q9BTC8 594 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 PRR12Q9ULL5 1215 aa20.72■□□□□ 0.91
SF1-212ENST00000463343 FDX1P10109 184 aa20.71■□□□□ 0.91
SF1-212ENST00000463343 ERCC3P19447 782 aa20.71■□□□□ 0.91
SF1-212ENST00000463343 CACNB2Q08289 660 aaPredicted RBP20.71■□□□□ 0.91
SF1-212ENST00000463343 LHX8Q68G74 356 aa20.71■□□□□ 0.91
SF1-212ENST00000463343 RIOX2Q8IUF8 465 aa20.71■□□□□ 0.91
SF1-212ENST00000463343 CPXCR1Q8N123 301 aa20.71■□□□□ 0.91
SF1-212ENST00000463343 LY9Q9HBG7 655 aa20.71■□□□□ 0.91
SF1-212ENST00000463343 COL6A3P12111 3177 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 SH2B2O14492 632 aaPredicted RBP20.7■□□□□ 0.9
SF1-212ENST00000463343 ATP2A1O14983 1001 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 PTPREP23469 700 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 SNAP25P60880 206 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 GPATCH4Q5T3I0 446 aaKnown RBP20.7■□□□□ 0.9
SF1-212ENST00000463343 SYDE2Q5VT97 1194 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 WDR78Q5VTH9 848 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 DHX32Q7L7V1 743 aaKnown RBP20.7■□□□□ 0.9
SF1-212ENST00000463343 NCAPG2Q86XI2 1143 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 TMEM87BQ96K49 555 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 APBA2Q99767 749 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 LRRC2Q9BYS8 371 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 RAVER2Q9HCJ3 691 aaKnown RBP20.7■□□□□ 0.9
SF1-212ENST00000463343 RIPK3Q9Y572 518 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 CTDP1Q9Y5B0 961 aaPredicted RBP20.7■□□□□ 0.9
SF1-212ENST00000463343 A0A0G2JMZ2 1700 aa20.7■□□□□ 0.9
SF1-212ENST00000463343 SEC24BO95487 1268 aa20.69■□□□□ 0.9
SF1-212ENST00000463343 SLC25A27O95847 323 aa20.69■□□□□ 0.9
SF1-212ENST00000463343 MAP2K5Q13163 448 aa20.69■□□□□ 0.9
SF1-212ENST00000463343 LRCH3Q96II8 777 aa20.69■□□□□ 0.9
SF1-212ENST00000463343 UBA5Q9GZZ9 404 aa20.69■□□□□ 0.9
SF1-212ENST00000463343 CPVLQ9H3G5 476 aa20.69■□□□□ 0.9
SF1-212ENST00000463343 MROH8Q9H579 483 aa20.69■□□□□ 0.9
SF1-212ENST00000463343 CWC22Q9HCG8 908 aaKnown RBP20.69■□□□□ 0.9
SF1-212ENST00000463343 PFASO15067 1338 aa20.69■□□□□ 0.9
SF1-212ENST00000463343 A0A0C4DFX4 3053 aa20.69■□□□□ 0.9
SF1-212ENST00000463343 HOXC6P09630 235 aa20.68■□□□□ 0.9
SF1-212ENST00000463343 PARP1P09874 1014 aaKnown RBP20.68■□□□□ 0.9
SF1-212ENST00000463343 TROAPQ12815 778 aa20.68■□□□□ 0.9
SF1-212ENST00000463343 ASPRV1Q53RT3 343 aa20.68■□□□□ 0.9
SF1-212ENST00000463343 SNRNP48Q6IEG0 339 aaKnown RBP20.68■□□□□ 0.9
SF1-212ENST00000463343 TMTC2Q8N394 836 aa20.68■□□□□ 0.9
SF1-212ENST00000463343 STAG2Q8N3U4 1231 aa20.68■□□□□ 0.9
SF1-212ENST00000463343 SLC17A8Q8NDX2 589 aa20.68■□□□□ 0.9
SF1-212ENST00000463343 TCEANC2Q96MN5 208 aa20.68■□□□□ 0.9
SF1-212ENST00000463343 JAKMIP1Q96N16 626 aaKnown RBP20.68■□□□□ 0.9
SF1-212ENST00000463343 TEX13BQ9BXU2 312 aa20.68■□□□□ 0.9
SF1-212ENST00000463343 ZMYND8Q9ULU4 1186 aaPredicted RBP20.68■□□□□ 0.9
SF1-212ENST00000463343 ZNF536O15090 1300 aa20.68■□□□□ 0.9
SF1-212ENST00000463343 SLC15A5A6NIM6 579 aa20.67■□□□□ 0.9
SF1-212ENST00000463343 STRNO43815 780 aa20.67■□□□□ 0.9
SF1-212ENST00000463343 HMGB1P09429 215 aaKnown RBP20.67■□□□□ 0.9
SF1-212ENST00000463343 CPA1P15085 419 aa20.67■□□□□ 0.9
SF1-212ENST00000463343 LIFRP42702 1097 aa20.67■□□□□ 0.9
SF1-212ENST00000463343 MAGEA10P43363 369 aaPredicted RBP20.67■□□□□ 0.9
SF1-212ENST00000463343 SLC4A3P48751 1232 aa20.67■□□□□ 0.9
SF1-212ENST00000463343 OAZ1P54368 228 aa20.67■□□□□ 0.9
SF1-212ENST00000463343 TDHQ8IZJ6 230 aa20.67■□□□□ 0.9
SF1-212ENST00000463343 AGBL1Q96MI9 1066 aa20.67■□□□□ 0.9
SF1-212ENST00000463343 RANBP17Q9H2T7 1088 aaKnown RBP20.67■□□□□ 0.9
SF1-212ENST00000463343 MAD2L2Q9UI95 211 aa20.67■□□□□ 0.9
SF1-212ENST00000463343 WDR19Q8NEZ3 1342 aa20.67■□□□□ 0.9
SF1-212ENST00000463343 PALM3A6NDB9 673 aaPredicted RBP20.66■□□□□ 0.9
SF1-212ENST00000463343 GRM4Q14833 912 aa20.66■□□□□ 0.9
SF1-212ENST00000463343 CCL14Q16627 93 aa20.66■□□□□ 0.9
SF1-212ENST00000463343 CCDC174Q6PII3 467 aa20.66■□□□□ 0.9
SF1-212ENST00000463343 CATIPQ7Z7H3 387 aa20.66■□□□□ 0.9
SF1-212ENST00000463343 IVNS1ABPQ9Y6Y0 642 aa20.66■□□□□ 0.9
SF1-212ENST00000463343 COL11A1P12107 1806 aaPredicted RBP20.66■□□□□ 0.9
SF1-212ENST00000463343 KLRF2D3W0D1 207 aa20.65■□□□□ 0.9
SF1-212ENST00000463343 MSCO60682 206 aa20.65■□□□□ 0.9
SF1-212ENST00000463343 CCND3P30281 292 aaPredicted RBP20.65■□□□□ 0.9
SF1-212ENST00000463343 COPB2P35606 906 aa20.65■□□□□ 0.9
SF1-212ENST00000463343 GRB14Q14449 540 aa20.65■□□□□ 0.9
SF1-212ENST00000463343 C8orf34Q49A92 452 aa20.65■□□□□ 0.9
SF1-212ENST00000463343 MFSD14CQ5VZR4 134 aa20.65■□□□□ 0.9
SF1-212ENST00000463343 NFXL1Q6ZNB6 911 aa20.65■□□□□ 0.9
SF1-212ENST00000463343 ZNF654Q8IZM8 581 aa20.65■□□□□ 0.9
SF1-212ENST00000463343 CCDC69A6NI79 296 aa20.64■□□□□ 0.89
SF1-212ENST00000463343 IGHA2P01877 340 aa20.64■□□□□ 0.89
SF1-212ENST00000463343 PSMA5P28066 241 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms